Microbacterium sediminicola

Bacteria
General | Carbohydrate O/F | Substrate utilisation | Enzymes | Metabolites | Antibiotics

Overview

  • Microbacterium sediminicola is a Gram-positive, non-spore-forming, aerobic, rod-shaped bacterium. It has been detected in at least 1 gut microbiome compilation study or metastudy. The DNA G+C content is 67.8%. Microbacterium sediminicola is likely to be transient and not a long-term gut coloniser. (Kageyama2007; Suzuki2012Bergey)



  • This organism has been recovered from human faeces and river sediment. The risk classification (www.baua.de) for this organism is 1, i.e., low risk of infection and spread. Pathogenicity status unknown, or very unlikely to be pathogenic. A possible gut commensal.
    • GENERAL CHARACTERISTICS (Kageyama2007); (Suzuki2012Bergey);
    Character Response
  • 🧂
  • Salt tolerance:
  • tolerates 7% salt;
  • pH
  • Acidity tolerance:
  • tolerates pH 6.0; tolerates pH 11;
  • 🌡
  • Temperature tolerance:
  • grows at 19℃; grows at 38℃;
  • ⥅
  • Substrates assimilated or utilised:
  • L-arabinose; galactose; glucose; maltose; mannitol; mannose; rhamnose; trehalose; xylose;
  • Active enzymes:
  • acid phosphatase; N-Ac β-glucosaminidase; catalase; cystine arylamidase; esterase C4; esterase lipase C8; α-galactosidase; β-galactosidase; α-glucosidase; β-glucosidase; Leu arylamidase; Val arylamidase;
    • SPECIAL FEATURES (Kageyama2007); (Suzuki2012Bergey);
    Character Response
  • Pigments:
  • pale yellow

    • Details

    GENERAL
    Lineage Physiology General Growth Tolerances Hydrol./digest./degr.
    Phylum:  Actinobacteria Class:  Actinomycetia Order:  Micrococcales Family:  Microbacteriaceae Genus:  Microbacterium Gram stain:  + O2 Relation.:  aerobic Spore:  No spore Morphology:  Rod Pigment:  pale yellow
    Health:  Unknown
    Source:  human faeces and river sediment
    DNA G+C(%):  67.8
    Lower T(℃):  19(+)
    Mid T(℃):  38(+)
    NaCl >6%:  7(+)
    pH 6.0-8.0:  6.0(+)
    pH >8:  11(+)
    SUBSTRATE ASSIMILATION & UTILISATION
    Monosaccharide util/assim Oligosaccharide util/assim Other carboh. util/assim Amino acid util/assim Organic acid util/assim
    L-Arabinose:  + Fructose:  neg Galactose:  + Glucose:  + Mannose:  + Rhamnose:  + Xylose:  + Maltose:  + Raffinose:  neg Sucrose:  neg Trehalose:  + Mannitol:  +
    ENZYME ACTIVITY
    Enzymes: General Enzymes: Carbohydrate Enzymes: Protein Enzymes: Arylamidases Enzymes: Esters/fats
    Catalase:  + Ac-β-glcamnd:  + α-Fucosidase:  neg α-Galactosidase:  + β-Galactosidase:  + α-Glucosidase:  + β-Glucosidase:  + β-Glucuronidase:  neg α-Mannosidase:  neg Chymotrypsin:  neg Trypsin:  w CystineAA:  + LeuAA:  + ValAA:  + AlkalineP:  neg AcidP:  + Esterase(C4):  + EstLip(C8):  + Lipase(C14):  w
    METABOLITES - PRODUCTION & USE
    Fuel Usable Metabolites Metabolites Released Special Products Compounds Produced

    		Pigment:  pale yellow

    References

    SPECIFIC REFERENCES FOR MICROBACTERIUM SEDIMINICOLA
  • Kageyama2007 - Microbacterium sediminicola sp. nov. and Microbacterium marinilacus sp. nov., isolated from marine environments.
  • Suzuki2012Bergey - Bergey's manual of systematic bacteriology. Vol. 5, The Actinobacteria. Part A & B. Microbacteriaceae, Genus I. Microbacteria
  • ...............................
    • GUT MICROBIOME COMPILATIONS AND METASTUDIES FOR MICROBACTERIUM SEDIMINICOLA
  • Yang2020 - Species-Level Analysis of Human Gut Microbiota With Metataxonomics.
  • Yang2020a - Establishing high-accuracy biomarkers for colorectal cancer by comparing fecal microbiomes in patients with healthy families
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    • Added: December 15, 2021