Nocardioides kribbensis

Bacteria
General | Carbohydrate O/F | Substrate utilisation | Enzymes | Metabolites | Antibiotics

Overview

  • Nocardioides kribbensis is a Gram-positive, non-spore-forming, aerobic, non-motile, rod-shaped-coccus cycle bacterium. It has been detected in at least 1 gut microbiome compilation study or metastudy. The DNA G+C content is 73-74%. Nocardioides kribbensis is likely to be transient and not a long-term gut coloniser. (Yoon2005d)



  • This organism has been recovered from alkaline soil. The risk classification (www.baua.de) for this organism is 1, i.e., low risk of infection and spread. Pathogenicity status unknown, or very unlikely to be pathogenic. Likely to be transient and not a long-term gut commensal.
    • QUIRKS
  • Doesn't grow at 37C, has high optimum pH and is aerobic, so an unlikely gut coloniser.
    • GENERAL CHARACTERISTICS (Yoon2005d);
    Character Response
  • Substrates hydrolysed or digested:
  • aesculin; casein; gelatin; tyrosine;
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  • Salt tolerance:
  • tolerates 0% salt; tolerates 3% salt;
  • pH
  • Acidity tolerance:
  • tolerates pH 6.0; tolerates pH 11; Grows optimally at pH 9.0.
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  • Temperature tolerance:
  • grows at 4℃; grows at 35℃; Grows optimally at 30℃.
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  • Substrates assimilated or utilised:
  • cellubiose; galactose; glucose; maltose; mannitol; rhamnose; ribose; raffinose; sorbitol; sucrose; trehalose;
  • Active enzymes:
  • alkaline phosphatase; acid phosphatase; catalase; chymotrypsin; esterase C4; esterase lipase C8; α-glucosidase; Leu arylamidase; oxidase; naphthol-ASBI-P;
    • SPECIAL FEATURES
    Character Response
  • ✓
  • Nitrate:
  • reduced

    • Details

    GENERAL
    Lineage Physiology General Growth Tolerances Hydrol./digest./degr.
    Phylum:  Actinobacteria Class:  Actinomycetia Order:  Propionibacteriales Family:  Nocardioidaceae Genus:  Nocardioides Gram stain:  + O2 Relation.:  aerobic Spore:  No spore Motility:  Sessile Morphology:  Rod-coccus cycle
    Health:  Unknown
    Source:  alkaline soil
    DNA G+C(%):  73-74
    Opt. T:  30℃
    Low T(℃):  4(+)
    Mid T(℃):  35(+)
    NaCl 0.5-2%:  0(+)
    NaCl 3-5%:  3(+)
    Opt. pH:  9.0
    pH 6.0-8.0:  6.0(+)
    pH >8:  11(+)
    		Aesculin:  + Urea:  neg Gelatin:  + Starch:  neg Casein:  + Tyrosine:  + Tween:  20(+) 40(+) 60(+) 80(+)
    SUBSTRATE ASSIMILATION & UTILISATION
    Monosaccharide util/assim Oligosaccharide util/assim Other carboh. util/assim Amino acid util/assim Organic acid util/assim
    L-Arabinose:  neg Fructose:  neg Galactose:  + Glucose:  + Mannose:  neg Rhamnose:  + Ribose:  + Xylose:  neg Cellubiose:  + Lactose:  neg Maltose:  + Melezitose:  neg Melibiose:  neg Raffinose:  + Sucrose:  + Trehalose:  + Adonitol:  neg Inositol:  neg Mannitol:  + Sorbitol:  +
    ENZYME ACTIVITY
    Enzymes: General Enzymes: Carbohydrate Enzymes: Protein Enzymes: Arylamidases Enzymes: Esters/fats
    Oxidase:  + Catalase:  + Urease:  neg Ac-β-glcamnd:  neg α-Fucosidase:  neg α-Galactosidase:  neg β-Galactosidase:  w α-Glucosidase:  + β-Glucosidase:  neg β-Glucuronidase:  neg α-Mannosidase:  neg Chymotrypsin:  + Trypsin:  neg CystineAA:  neg LeuAA:  + ValAA:  neg AlkalineP:  + AcidP:  + Esterase(C4):  + EstLip(C8):  + Lipase(C14):  neg

    References

    SPECIFIC REFERENCES FOR NOCARDIOIDES KRIBBENSIS
  • Yoon2005d - Nocardioides kribbensis sp. nov., isolated from an alkaline soil.
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    • GUT MICROBIOME COMPILATIONS AND METASTUDIES FOR NOCARDIOIDES KRIBBENSIS
  • Frank2007 - Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases.
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    • Added: March 18, 2022