Odoribacter laneus

Bacteria
General | Carbohydrate O/F | Substrate utilisation | Enzymes | Metabolites | Antibiotics

Overview

  • Odoribacter laneus is a Gram-negative, non-spore-forming, strictly anaerobic, non-motile, bacterium. It has been detected in at least 12 gut microbiome compilation studies or metastudies. The DNA G+C content is 42.4%. Odoribacter laneus is probably a common, although minor, coloniser of the gut. (Nagai2010)



  • This organism has been recovered from human faeces. Pathogenicity status unknown, or very unlikely to be pathogenic. A possible gut commensal.
    • GENERAL CHARACTERISTICS (Nagai2010);
    Character Response
  • Substrates hydrolysed or digested:
  • gelatin;
  • 💧
  • Bile tolerance:
  • Doesn't tolerate 20% bile
  • Active enzymes:
  • Ala arylamidase; alkaline phosphatase; acid phosphatase; Arg arylamidase; N-Ac β-glucosaminidase; chymotrypsin; esterase C4; esterase lipase C8; α-galactosidase; β-galactosidase; α-glucosidase; glutamic acid decarboxylase; Glu-Glu arylamidase; His arylamidase; Leu-Gly arylamidase; Phe arylamidase; pyroGlu arylamidase; Tyr arylamidase;
  • ±
  • Strain-dependent active enzymes:
  • fucosidase; Leu arylamidase;
    • SPECIAL FEATURES (Nagai2010);
    Character Response
  • ✓
  • Metabolites produced:
  • acetate (minor); isobutyrate (minor); succinate (minor); isovalerate (minor); indole;
  • ✗
  • Nitrate:
  • not reduced

  • Nagai, F., Morotomi, M., Sakon, H., & Tanaka, R. (2009). Parasutterella excrementihominis gen. nov., sp. nov., a member of the family Alcaligenaceae isolated from human faeces. International Journal of Systematic and Evolutionary Microbiology, 59(Pt 7), 1793–1797.

    • Details

    GENERAL
    Lineage Physiology General Growth Tolerances Hydrol./digest./degr.
    Phylum:  Bacteroidetes Class:  Bacteroidia Order:  Bacteroidales Family:  Odoribacteraceae Genus:  Odoribacter Gram stain:  neg O2 Relation.:  strictly anaerobic Spore:  No spore Motility:  Sessile
    Health:  Unknown
    Source:  human faeces
    DNA G+C(%):  42.4
    Bile reaction(%):  20(neg)
    		Aesculin:  neg Urea:  neg Gelatin:  +
    CARBOHYDRATE ACID FORMATION
    Monosaccharide O/F Oligosaccharide O/F Polysaccharide O/F Polyol O/F Other O/F
    Arabinose:  neg Fructose:  neg Galactose:  neg Glucose:  neg Mannose:  neg Rhamnose:  neg Xylose:  neg Cellubiose:  neg Lactose:  neg Maltose:  neg Melezitose:  neg Sucrose:  neg Trehalose:  neg Glycerol:  neg Mannitol:  neg Sorbitol:  neg Salicin:  neg
    ENZYME ACTIVITY
    Enzymes: General Enzymes: Carbohydrate Enzymes: Protein Enzymes: Arylamidases Enzymes: Esters/fats
    Oxidase:  neg Catalase:  neg Urease:  neg G6PDH6PGDH:  neg α-Arab:  neg Ac-β-glcamnd:  + α-Fucosidase:  d α-Galactosidase:  + β-Galactosidase:  + α-Glucosidase:  + β-Glucosidase:  neg β-Glucuronidase:  w α-Mannosidase:  neg ArgDH:  neg Chymotrypsin:  + GluDC:  + Trypsin:  neg AlanineAA:  + ArgAA:  + CystineAA:  neg GluGluAA:  + GlyAA:  neg HisAA:  + LeuAA:  d LeuGlyAA:  + ProAA:  neg PyrrolidAA:  neg PheAA:  + PyrogluAA:  + SerAA:  neg TyrAA:  + ValAA:  neg AlkalineP:  + AcidP:  + Esterase(C4):  + EstLip(C8):  + Lipase(C14):  neg
    METABOLITES - PRODUCTION & USE
    Fuel Usable Metabolites Metabolites Released Special Products Compounds Produced

    		Acetate:  minor(+) Isobutyrate:  minor(+) Succinate:  minor(+) Isovalerate:  minor(+) Indole:  +

    References

    SPECIFIC REFERENCES FOR ODORIBACTER LANEUS
  • Nagai2010 - Alistipes indistinctus sp. nov. and Odoribacter laneus sp. nov., common members of the human intestinal microbiota isolated from faeces.
  • Luo2018 - Gut Microbiota in Human Systemic Lupus Erythematosus and a Mouse Model of Lupus
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    • GUT MICROBIOME COMPILATIONS AND METASTUDIES FOR ODORIBACTER LANEUS
  • Byrd2020 - Stability and dynamics of the human gut microbiome and its association with systemic immune traits.
  • Dubinkina2017 - Links of gut microbiota composition with alcohol dependence syndrome and alcoholic liver disease
  • Forster2019 - A human gut bacterial genome and culture collection for improved metagenomic analyses.
  • Jie2017 - The gut microbiome in atherosclerotic cardiovascular disease
  • Karlsson2013 - Gut metagenome in European women with normal, impaired and diabetic glucose control
  • Lagier2016 - Culture of previously uncultured members of the human gut microbiota by culturomics.
  • Minerbi2019 - Altered microbiome composition in individuals with fibromyalgia
  • Nielsen2014 - MetaHIT Consortium. Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes.
  • Qin2012 - Metagenome-wide association study of gut microbiota in type 2 diabetes
  • RajilicStojanovic2014 - The first 1000 cultured species of the human gastrointestinal microbiota.
  • Rothschild2018 - Environment dominates over host genetics in shaping human gut microbiota.
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    • Added: April 08, 2021