Pantoea rodasii

Bacteria
General | Carbohydrate O/F | Substrate utilisation | Enzymes | Metabolites | Antibiotics

Overview

  • Pantoea rodasii is a Gram-negative, non-spore-forming, facultatively anaerobic, motile, rod-shaped bacterium. It has been detected in at least 1 gut microbiome compilation study or metastudy. The DNA G+C content is 53.2%. Pantoea rodasii is likely to be transient and not a long-term gut coloniser. (Brady2012)



  • This organism has been recovered from human faeces and as Eucalypt leaf blight. Pathogenicity status unknown, or very unlikely to be pathogenic. Likely to be transient and not a long-term gut commensal.
    • GENERAL CHARACTERISTICS (Brady2012);
    Character Response
  • H+
  • Acid from carbohydrates usually produced:
  • L-arabinose; fructose; D-fucose; galactose; glucose; mannose; rhamnose; ribose; xylose; aesculin; cellubiose; gentiobiose; melibiose; sucrose; trehalose; adonitol; D-arabitol; glycerol; inositol; mannitol; arbutin; N-Ac glucosamine; salicin;
  • ⥅
  • Substrates assimilated or utilised:
  • N-acetylglucosamine; adonitol; L-arabinose; d_arabitol; cellubiose; erythritol; fructose; galactose; gluconate; glucosamine; gentiobiose; glucose; glycerol; inositol; mannitol; mannose; methyl-α-glucoside; rhamnose; sorbitol; sucrose; trehalose; alanine; D-alanine; aspartate; glutamate; histidine; proline; serine; acetate; formate; DL-lactate; quinate; saccharate; succinate; methyl-β-glucoside; glucose-1-phosphate; DL-glycerol phosphate; psicose; glutamine; L-asparagine; D-glucuronate; methyl succinate; methyl pyruvate; D-glucose-6-phosphate; glucuronamide; urocanic acid;
  • ±
  • Strain-dependent substrate utilisation:
  • lactose; melibiose;
  • Active enzymes:
  • catalase; β-galactosidase;
    • SPECIAL FEATURES (Brady2012);
    Character Response
  • ✗
  • Metabolites not produced:
  • H₂S; indole;
  • ✓
  • VP test:
  • active

    • Details

    GENERAL
    Lineage Physiology General Growth Tolerances Hydrol./digest./degr.
    Phylum:  Proteobacteria Class:  Betaproteobacteria Order:  Enterobacterales Family:  Erwiniaceae Genus:  Pantoea Gram stain:  neg O2 Relation.:  facultatively anaerobic Spore:  No spore Motility:  Swimming Morphology:  Rod
    Health:  Unknown
    Source:  human faeces and as Eucalypt leaf blight
    DNA G+C(%):  53.2
    		Urea:  neg Tween:  40(+) 80(+)
    CARBOHYDRATE ACID FORMATION
    Monosaccharide O/F Oligosaccharide O/F Polysaccharide O/F Polyol O/F Other O/F
    L-Arabinose:  + Fructose:  + D-Fucose:  + Galactose:  + Glucose:  + Mannose:  + Rhamnose:  + Ribose:  + Xylose:  + Cellubiose:  + Gentiobiose:  + Lactose:  neg Melibiose:  + Sucrose:  + Trehalose:  + Aesculin:  + Adonitol:  + D-Arabitol:  + Dulcitol:  neg Glycerol:  + Inositol:  + Mannitol:  + Arbutin:  + NAc-α-GA:  + Salicin:  +
    SUBSTRATE ASSIMILATION & UTILISATION
    Monosaccharide util/assim Oligosaccharide util/assim Other carboh. util/assim Amino acid util/assim Organic acid util/assim
    L-Arabinose:  + Fructose:  + Fucose:  neg Galactose:  + Glucose:  + Mannose:  + Rhamnose:  + Cellubiose:  + Gentiobiose:  + Lactose:  d Melibiose:  d Sucrose:  + Trehalose:  + N_Acetyl_glucosamine:  + Adonitol:  + D-Arabitol:  + Erythritol:  + Gluconate:  + Glucosamine:  + Glycerol:  + Inositol:  + Mannitol:  + Me-α-D-Glc:  + Sorbitol:  + Xylitol:  neg Ala:  + D-Ala:  + Asp:  + Glu:  + His:  + Pro:  + Ser:  + Acetate:  + Citrate:  neg Formate:  + DL-Lactate:  + Quinate:  + Saccharate:  + Succinate:  +
    ENZYME ACTIVITY
    Enzymes: General Enzymes: Carbohydrate Enzymes: Protein Enzymes: Arylamidases Enzymes: Esters/fats
    Oxidase:  neg Catalase:  + Urease:  neg β-Galactosidase:  + ArgDH:  neg LysDC:  neg OrnDC:  neg
    METABOLITES - PRODUCTION & USE
    Fuel Usable Metabolites Metabolites Released Special Products Compounds Produced

    		H2S:  neg Indole:  neg

    References

    SPECIFIC REFERENCES FOR PANTOEA RODASII
  • Brady2012 - Pantoea rodasii sp. nov., Pantoea rwandensis sp. nov. and Pantoea wallisii sp. nov., isolated from Eucalyptus.
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    • GUT MICROBIOME COMPILATIONS AND METASTUDIES FOR PANTOEA RODASII
  • Yang2020 - Species-Level Analysis of Human Gut Microbiota With Metataxonomics.
  • Yang2020a - Establishing high-accuracy biomarkers for colorectal cancer by comparing fecal microbiomes in patients with healthy families
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    • Added: December 15, 2021