Pantoea septica

Bacteria
General | Carbohydrate O/F | Substrate utilisation | Enzymes | Metabolites | Antibiotics

Overview

  • Pantoea septica is a Gram-negative, non-spore-forming, facultatively anaerobic, motile, rod-shaped bacterium. It has been detected in at least 1 gut microbiome compilation study or metastudy. The DNA G+C content is 59.3%. Pantoea septica is probably a rare gut coloniser. (Brady2010)



  • This organism has been recovered from human faeces (CCUG), and clinical sources (blood, urine - CCUG). Is a known human pathogen. A possible gut commensal.
    • GENERAL CHARACTERISTICS (Brady2010);
    Character Response
  • 🌡
  • Temperature tolerance:
  • Grows optimally at 28-30℃.
  • H+
  • Acid from carbohydrates usually produced:
  • L-arabinose; fructose; galactose; rhamnose; ribose; xylose; maltose; trehalose; mannitol; N-Ac glucosamine;
  • ±
  • Strain-dependent acid from carbs:
  • cellubiose; lactose; glycerol; inositol;
  • ⥅
  • Substrates assimilated or utilised:
  • N-acetylglucosamine; L-arabinose; cellubiose; fructose; galactose; gluconate; glucose; glycerol; inositol; mannitol; mannose; methyl-α-glucoside; rhamnose; trehalose; xylose; alanine; aspartate; glutamate; histidine; serine; aconitate; DL-lactate; methyl-β-glucoside; glutamine; D-glucuronate; D-malate;
  • ±
  • Strain-dependent substrate utilisation:
  • d_arabitol; dulcitol; fucose; gentiobiose; lactose; maltose; maltotriose; melibiose; raffinose; sorbitol; sucrose; xylitol; citrate; L-tartrate; meso-tartrate; lactulose;
  • Active enzymes:
  • phenylalanine deaminase;
    • SPECIAL FEATURES (Brady2010);
    Character Response
  • ✗
  • Metabolites not produced:
  • H₂S; indole;
  • ✗
  • VP test:
  • not active
  • ✗
  • Thiosulfate:
  • not reduced
  • ✗
  • Pigments:
  • not produced
    • RESPONSE TO ANTIBIOTICS
    Class Active Resistant
  • Cephalosporins:
  • cefdinir; cefixime; cefotaxime; cefpodoxime; ceftazidime; ceftizoxime;
  • Quinolines:
  • ciprofloxacin;
  • Miscellaneous antibiotics:
  • colistin;

    • Details

    GENERAL
    Lineage Physiology General Growth Tolerances Hydrol./digest./degr.
    Phylum:  Proteobacteria Class:  Gammaproteobacteria Order:  Enterobacterales Family:  Enterobacteriaceae Genus:  Pantoea Gram stain:  neg O2 Relation.:  facultatively anaerobic Spore:  No spore Motility:  Swimming Morphology:  Rod Pigment:  neg
    Health:  Unknown
    Source:  human faeces (CCUG), and clinical sources (blood, urine - CCUG)
    DNA G+C(%):  59.3
    Opt. T:  28-30℃
    		Urea:  neg Pectin:  neg
    CARBOHYDRATE ACID FORMATION
    Monosaccharide O/F Oligosaccharide O/F Polysaccharide O/F Polyol O/F Other O/F
    L-Arabinose:  + Fructose:  + Galactose:  + Rhamnose:  + Ribose:  + Xylose:  + Cellubiose:  d Lactose:  d Maltose:  + Trehalose:  + Dulcitol:  neg Glycerol:  d Inositol:  d Mannitol:  + NAc-α-GA:  +
    SUBSTRATE ASSIMILATION & UTILISATION
    Monosaccharide util/assim Oligosaccharide util/assim Other carboh. util/assim Amino acid util/assim Organic acid util/assim
    L-Arabinose:  + Fructose:  + Fucose:  d Galactose:  + Glucose:  + Mannose:  + Rhamnose:  + Sorbose:  neg D-Tagatose:  neg Xylose:  + Cellubiose:  + Gentiobiose:  d Lactose:  d Maltose:  d Maltotriose:  d Melezitose:  neg Melibiose:  d Raffinose:  d Sucrose:  d D-Turanose:  neg Trehalose:  + N_Acetyl_glucosamine:  + Adonitol:  neg D-Arabitol:  d L-Arabitol:  neg Dulcitol:  d(w) Erythritol:  neg Ethanolamine:  neg Gluconate:  + Glycerol:  + Inositol:  + Mannitol:  + Me-α-D-Glc:  + Sorbitol:  d Xylitol:  d Ala:  + Asp:  + Betaine:  neg Glu:  + Histamine:  neg His:  + Ser:  + Tryptamine:  neg Tyr:  neg Aconitate:  cis(+) Benzoate:  neg Caprate:  neg Caprylate:  neg Citrate:  d Glutarate:  neg 3-Hydroxybutyrate:  neg 3-Hydroxybenzoate:  neg 4-Hydroxybenzoate:  neg DL-Lactate:  + Phenylacetate:  neg Phenylpropionate:  neg Propionate:  neg Quinate:  neg D-Tartrate:  neg L-Tartrate:  d Valerate:  neg
    ENZYME ACTIVITY
    Enzymes: General Enzymes: Carbohydrate Enzymes: Protein Enzymes: Arylamidases Enzymes: Esters/fats
    Oxidase:  neg Urease:  neg LysDC:  neg OrnDC:  neg Phe deaminase:  +
    METABOLITES - PRODUCTION & USE
    Fuel Usable Metabolites Metabolites Released Special Products Compounds Produced

    		H2S:  neg Indole:  neg Pigment:  neg
    ANTIBIOTICS ℞
    Penicillins & Penems (μg/mL) Cephalosporins (μg/mL) Aminoglycosides (μg/mL) Macrolides (μg/mL) Quinolones (μg/mL)
    cefdinir:  S(clinic)
    cefixime:  S(clinic)
    cefotaxime:  S(clinic)
    cefpodoxime:  S(clinic)
    ceftazidime:  S(clinic)
    ceftizoxime:  S(clinic)
    ciprofloxacin:  S(clinic)
    Tetracyclines (μg/mL) Vancomycin Class (μg/mL) Polypep/ketides (μg/mL) Heterocycles (μg/mL) Other (μg/mL)
    colistin:  S(clinic)

    References

    SPECIFIC REFERENCES FOR PANTOEA SEPTICA
  • Brady2010 - Emended description of the genus Pantoea, description of four species from human clinical samples, Pantoea septica sp. nov., Pantoea eucrina sp. nov., Pantoea brenneri sp. nov. and Pantoea conspicua sp. nov., and transfer of Pectobacterium cypripedii (Hori 1911) Brenner et al. 1973 emend. Hauben et al. 1998 to the genus as Pantoea cypripedii comb. nov.
  • Walterson2015 - Pantoea: insights into a highly versatile and diverse genus within the Enterobacteriaceae.
  • ...............................
    • GUT MICROBIOME COMPILATIONS AND METASTUDIES FOR PANTOEA SEPTICA
  • Lagier2016 - Culture of previously uncultured members of the human gut microbiota by culturomics.
  • ...............................
    • GENERAL REFERENCES FOR PANTOEA SEPTICA
  • CCUG - Culture Collection University of Gothenburg - Entire Collection
    • Added: July 12, 2021