Pseudomonas asplenii

Bacteria
General | Carbohydrate O/F | Substrate utilisation | Enzymes | Metabolites | Antibiotics

Overview

  • Pseudomonas asplenii is a Gram-negative, non-spore-forming, aerobic, motile, rod-shaped bacterium. It has been detected in at least 1 gut microbiome compilation study or metastudy. Pseudomonas asplenii is likely to be transient and not a long-term gut coloniser. (Tvrzova2006)



  • This organism has been recovered from bird's nest fern (pathogen). The risk classification (www.baua.de) for this organism is 1, i.e., low risk of infection and spread (notes: plant pathogen). Pathogenicity status unknown, or very unlikely to be pathogenic. Likely to be transient and not a long-term gut commensal.
    • QUIRKS
  • Unlikely gut coloniser.
    • GENERAL CHARACTERISTICS (Tvrzova2006);
    Character Response
  • H+
  • Acid from carbohydrates usually produced:
  • L-arabinose; fructose; glucose; mannose; trehalose; D-arabitol; glycerol; mannitol; gluconate;
  • ±
  • Strain-dependent acid from carbs:
  • galactose; ribose; xylose;
  • ⥅
  • Substrates assimilated or utilised:
  • d_arabitol; gluconate; alanine; D-alanine; γ-aminobutyrate; aspartate; glutamate; histidine; proline; serine; aconitate; caprate; citrate; formate; 3-hydroxybutyrate; 2-ketoglutarate; DL-lactate; malate; quinate; saccharate; glutamine; L-hydroxyproline; D-glucuronate; methyl pyruvate; inosine; p-hydroxyphenylacetate; DL-carnitine;
  • Active enzymes:
  • arginine dihydrolase; oxidase;
    • SPECIAL FEATURES (Tvrzova2006);
    Character Response
  • ✗
  • Metabolites not produced:
  • indole;
  • ✗
  • Nitrate:
  • not reduced
  • Pigments:
  • Fluorescent

    • Details

    GENERAL
    Lineage Physiology General Growth Tolerances Hydrol./digest./degr.
    Phylum:  Proteobacteria Class:  Gammaproteobacteria Order:  Pseudomonadales Family:  Pseudomonadaceae Genus:  Pseudomonas Gram stain:  neg O2 Relation.:  aerobic Spore:  No spore Motility:  Swimming Morphology:  Rod Pigment:  Fluorescent
    Health:  Unknown
    Source:  bird's nest fern (pathogen)
    		Aesculin:  neg Gelatin:  neg Starch:  neg
    CARBOHYDRATE ACID FORMATION
    Monosaccharide O/F Oligosaccharide O/F Polysaccharide O/F Polyol O/F Other O/F
    D-Arabinose:  neg L-Arabinose:  + Fructose:  + Fucose:  neg D-Fucose:  neg Galactose:  d(neg) Glucose:  + Mannose:  + D-Lyxose:  neg Rhamnose:  neg Ribose:  d(neg) Sorbose:  neg D-Tagatose:  neg Xylose:  d(neg) L-Xylose:  neg Cellubiose:  neg Gentiobiose:  neg Lactose:  neg Maltose:  neg Melezitose:  neg Melibiose:  neg Sucrose:  neg Trehalose:  + Turanose:  neg Amygdalin:  neg Aesculin:  neg Glycogen:  neg Inulin:  neg Starch:  neg Adonitol:  neg D-Arabitol:  + L-Arabitol:  neg Dulcitol:  neg Erythritol:  neg Glycerol:  + Inositol:  neg Mannitol:  + Sorbitol:  neg Xylitol:  neg Arbutin:  neg Gluconate:  + 2-Ketogluconate:  neg 5-Ketogluconate:  neg Me-α-D-Glc:  neg Me-α-D-Mann:  neg Me-Xyloside:  neg NAc-α-GA:  neg Salicin:  neg
    SUBSTRATE ASSIMILATION & UTILISATION
    Monosaccharide util/assim Oligosaccharide util/assim Other carboh. util/assim Amino acid util/assim Organic acid util/assim
    Fucose:  neg Rhamnose:  neg Cellubiose:  neg Gentiobiose:  neg Lactose:  neg Maltose:  neg Melibiose:  neg Raffinose:  neg Sucrose:  neg D-Turanose:  neg Trehalose:  neg Adonitol:  neg D-Arabitol:  + Dextrin:  neg Erythritol:  neg Ethanolamine:  neg Gluconate:  + Glycogen:  neg Inositol:  neg Sorbitol:  neg Xylitol:  neg Ala:  + D-Ala:  + 4-Aminobutyrate:  + Asp:  + Glu:  + His:  + Leu:  neg Phe:  neg Pro:  + Ser:  + Aconitate:  cis(+) Adipate:  neg Caprate:  + Citrate:  + Formate:  + 3-Hydroxybutyrate:  + Itaconate:  neg DL-Lactate:  + Malate:  + Malonate:  w Quinate:  + Saccharate:  + Sebacate:  neg
    ENZYME ACTIVITY
    Enzymes: General Enzymes: Carbohydrate Enzymes: Protein Enzymes: Arylamidases Enzymes: Esters/fats
    Oxidase:  + β-Galactosidase:  neg ArgDH:  +
    METABOLITES - PRODUCTION & USE
    Fuel Usable Metabolites Metabolites Released Special Products Compounds Produced

    		Indole:  neg Pigment:  Fluorescent

    References

    SPECIFIC REFERENCES FOR PSEUDOMONAS ASPLENII
  • Tvrzova2006 - Pseudomonas moraviensis sp. nov. and Pseudomonas vranovensis sp. nov., soil bacteria isolated on nitroaromatic compounds, and emended description of Pseudomonas asplenii.
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    • GUT MICROBIOME COMPILATIONS AND METASTUDIES FOR PSEUDOMONAS ASPLENII
  • Byrd2020 - Stability and dynamics of the human gut microbiome and its association with systemic immune traits.
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    • Added: May 15, 2022