Pseudomonas caricapapayae

Bacteria
General | Carbohydrate O/F | Substrate utilisation | Enzymes | Metabolites | Antibiotics

Overview

  • Pseudomonas caricapapayae is a Gram-negative, non-spore-forming, aerobic, motile, rod-shaped bacterium. It has been detected in at least 1 gut microbiome compilation study or metastudy. The DNA G+C content is 63.5-63.6%. Pseudomonas caricapapayae is unlikely to be a gut coloniser. (Palleroni2005bBergey)



  • This organism has been recovered from clay and dead beetle larvae. The risk classification (www.baua.de) for this organism is 1, i.e., low risk of infection and spread (notes: plant pathogen). Pathogenicity status unknown, or very unlikely to be pathogenic. Likely to be transient and not a long-term gut commensal.
    • GENERAL CHARACTERISTICS (Palleroni2005bBergey);
    Character Response
  • Substrates hydrolysed or digested:
  • gelatin;
  • 🌡
  • Temperature tolerance:
  • grows at 4℃; doesn't grow at 41℃; Grows optimally at 30℃.
  • ⥅
  • Substrates assimilated or utilised:
  • N-acetylglucosamine; d_arabitol; gluconate; glucose; glycerol; inositol; mannitol; mannose; ribose; raffinose; sucrose; trehalose; alanine; β-alanine; γ-aminobutyrate; arginine; aspartate; betaine; glutamate; histidine; isoleucine; DL-kynurenine; leucine; proline; tryptophan; tyrosine; valine; acetate; benzoate; butyrate; caprate; caprylate; citrate; fumarate; glutarate; glycerate; heptanoate; 3-hydroxybutyrate; 4-hydroxybenzoate; isovalerate; itaconate; 2-ketogluconate; 5-ketogluconate; DL-lactate; L-malate; malonate; mesaconate; mucate; nonanoate; propionate; pyruvate; quinate; saccharate; succinate; valerate; glutamine;
  • ±
  • Strain-dependent substrate utilisation:
  • ethanol; ethanolamine; fructose; galactose; propanol; δ-aminovalerate; L-citrulline; histamine; lysine; ornithine; phenylalanine; sarcosine; serine; aconitate; caproate; 3-hydroxybenzoate; levulinate; malate; phenylacetate; L-tartrate;
  • Active enzymes:
  • catalase; lecithinase; lipase;
    • SPECIAL FEATURES (Palleroni2005bBergey);
    Character Response
  • ✗
  • Metabolites not produced:
  • indole;
  • ✓
  • Nitrate:
  • reduced
  • ✓
  • Nitrite:
  • reduced
  • Pigments:
  • green

    • Details

    GENERAL
    Lineage Physiology General Growth Tolerances Hydrol./digest./degr.
    Phylum:  Proteobacteria Class:  Gammaproteobacteria Order:  Pseudomonadales Family:  Pseudomonadaceae Genus:  Pseudomonas Gram stain:  neg O2 Relation.:  aerobic Spore:  No spore Motility:  Swimming Morphology:  Rod Pigment:  green
    Health:  Unknown
    Source:  clay and dead beetle larvae
    DNA G+C(%):  63.5-63.6
    Opt. T:  30℃
    Low T(℃):  4(+)
    High T(℃):  41(neg)
    		Aesculin:  neg Gelatin:  +
    SUBSTRATE ASSIMILATION & UTILISATION
    Monosaccharide util/assim Oligosaccharide util/assim Other carboh. util/assim Amino acid util/assim Organic acid util/assim
    Arabinose:  neg L-Arabinose:  neg Fructose:  d Fucose:  neg D-Fucose:  neg Galactose:  d Glucose:  + D-Lyxose:  neg Mannose:  + Rhamnose:  neg Ribose:  + Sorbose:  neg D-Tagatose:  neg Xylose:  neg Cellubiose:  neg Gentiobiose:  neg Lactose:  neg Maltose:  neg Melezitose:  neg Melibiose:  neg Raffinose:  + Sucrose:  + D-Turanose:  neg Trehalose:  + N_Acetyl_glucosamine:  + Adonitol:  neg Amygdalin:  neg D-Arabitol:  + L-Arabitol:  neg Arbutin:  neg Dulcitol:  neg Erythritol:  neg Ethanol:  d Ethanolamine:  d Gluconate:  + Glycerol:  + Glycogen:  neg Inositol:  + Inulin:  neg Mannitol:  + Me-α-D-Glc:  neg Methanol:  neg Propanol:  d Salicin:  neg Sorbitol:  neg Starch:  neg Xylitol:  neg Ala:  + β-Ala:  + 4-Aminobutyrate:  + 5-Aminovalerate:  d Arg:  + Asp:  + Betaine:  + L-Citrulline:  d Glu:  + Gly:  neg Hippurate:  neg Histamine:  d His:  + Ile:  + DL-Kynurenine:  + Leu:  + Lys:  d Norleucine:  neg Orn:  d Phe:  d Pro:  + Sarcosine:  d Ser:  d Thr:  neg Trigonelline:  neg Tryptamine:  neg Trp:  + Tyr:  + Val:  + Acetate:  + Aconitate:  cis(d) Adipate:  neg Azelate:  neg Benzoate:  + Butyrate:  + Caprate:  + Caproate:  d Caprylate:  + Citraconate:  neg Citrate:  + Fumarate:  + Glutarate:  + Glycerate:  + Glycolate:  neg Heptanoate:  + 3-Hydroxybutyrate:  + 3-Hydroxybenzoate:  d 4-Hydroxybenzoate:  + Isobutyrate:  neg Isovalerate:  + Itaconate:  + 2-Ketogluconate:  + 5-Ketogluconate:  + DL-Lactate:  + Levulinate:  d Malate:  d L-Malate:  + Maleate:  neg Malonate:  + L-Mandelate:  neg Mesaconate:  + Mucate:  + Nonanoate:  + Phenol:  neg Phenylacetate:  d Pimelate:  neg Propionate:  + Pyruvate:  + Quinate:  + Saccharate:  + Sebacate:  neg Suberate:  neg Succinate:  + D-Tartrate:  neg L-Tartrate:  d Valerate:  +
    ENZYME ACTIVITY
    Enzymes: General Enzymes: Carbohydrate Enzymes: Protein Enzymes: Arylamidases Enzymes: Esters/fats
    Catalase:  + Urease:  neg β-Galactosidase:  neg Lecithinase:  + Lipase:  +
    METABOLITES - PRODUCTION & USE
    Fuel Usable Metabolites Metabolites Released Special Products Compounds Produced

    		Indole:  neg Pigment:  green

    References

    SPECIFIC REFERENCES FOR PSEUDOMONAS CARICAPAPAYAE
  • Palleroni2005bBergey - Bergey's manual of systematic bacteriology. Vol. 2, The Gammaproteobacteria Part B. Family Pseudomonadaceae, Genus I. Pseudomonas
  • ...............................
    • GUT MICROBIOME COMPILATIONS AND METASTUDIES FOR PSEUDOMONAS CARICAPAPAYAE
  • Lagier2016 - Culture of previously uncultured members of the human gut microbiota by culturomics.
  • ...............................
    • Added: January 14, 2022