Pseudomonas chlororaphis

Bacteria
General | Carbohydrate O/F | Substrate utilisation | Enzymes | Metabolites | Antibiotics

Overview

  • Pseudomonas chlororaphis is a Gram-negative, non-spore-forming, aerobic, motile, rod-shaped bacterium. It has been detected in at least 1 gut microbiome compilation study or metastudy. The DNA G+C content is 63%. Pseudomonas chlororaphis is unlikely to be a gut coloniser. (Palleroni2005bBergey; Peix2007)



  • This organism has been recovered from clay and dead beetle larvae. The risk classification (www.baua.de) for this organism is 1, i.e., low risk of infection and spread. Pathogenicity status unknown, or very unlikely to be pathogenic. Likely to be transient and not a long-term gut commensal.
    • GENERAL CHARACTERISTICS (Palleroni2005bBergey); (Peix2007);
    Character Response
  • Substrates hydrolysed or digested:
  • gelatin;
  • 🌡
  • Temperature tolerance:
  • grows at 4℃; doesn't grow at 41℃; Grows optimally at 30℃.
  • ⥅
  • Substrates assimilated or utilised:
  • N-acetylglucosamine; d_arabitol; gluconate; glucose; glycerol; inositol; mannose; ribose; raffinose; sucrose; trehalose; alanine; D-alanine; β-alanine; γ-aminobutyrate; arginine; aspartate; betaine; glutamate; histidine; isoleucine; DL-kynurenine; proline; tryptophan; tyrosine; valine; acetate; benzoate; butyrate; caprate; caprylate; citrate; fumarate; glutarate; glycerate; heptanoate; 3-hydroxybutyrate; 4-hydroxybenzoate; isovalerate; itaconate; 2-ketogluconate; DL-lactate; levulinate; L-malate; mesaconate; mucate; nonanoate; propionate; pyruvate; quinate; saccharate; succinate; valerate; glutamine;
  • ±
  • Strain-dependent substrate utilisation:
  • L-arabinose; ethanol; ethanolamine; fructose; galactose; propanol; δ-aminovalerate; L-citrulline; histamine; leucine; lysine; ornithine; phenylalanine; sarcosine; serine; aconitate; caproate; 3-hydroxybenzoate; 5-ketogluconate; malate; malonate; phenylacetate; L-tartrate;
  • Active enzymes:
  • catalase; lecithinase; lipase;
    • SPECIAL FEATURES (Palleroni2005bBergey); (Peix2007);
    Character Response
  • ✓
  • Nitrite:
  • reduced
  • Pigments:
  • green

    • Details

    GENERAL
    Lineage Physiology General Growth Tolerances Hydrol./digest./degr.
    Phylum:  Proteobacteria Class:  Gammaproteobacteria Order:  Pseudomonadales Family:  Pseudomonadaceae Genus:  Pseudomonas Gram stain:  neg O2 Relation.:  aerobic Spore:  No spore Motility:  Swimming Morphology:  Rod Pigment:  green
    Health:  Unknown
    Source:  clay and dead beetle larvae
    DNA G+C(%):  63
    Opt. T:  30℃
    Low T(℃):  4(+)
    High T(℃):  41(neg)
    		Gelatin:  +
    SUBSTRATE ASSIMILATION & UTILISATION
    Monosaccharide util/assim Oligosaccharide util/assim Other carboh. util/assim Amino acid util/assim Organic acid util/assim
    Arabinose:  neg L-Arabinose:  d Fructose:  d Fucose:  neg D-Fucose:  neg Galactose:  d Glucose:  + D-Lyxose:  neg Mannose:  + Rhamnose:  neg Ribose:  + Sorbose:  neg D-Tagatose:  neg Xylose:  neg Cellubiose:  neg Gentiobiose:  neg Lactose:  neg Maltose:  neg Melezitose:  neg Melibiose:  neg Raffinose:  + Sucrose:  + D-Turanose:  neg Trehalose:  + N_Acetyl_glucosamine:  + Adonitol:  neg Amygdalin:  neg D-Arabitol:  + L-Arabitol:  neg Arbutin:  neg Dulcitol:  neg Erythritol:  neg Ethanol:  d Ethanolamine:  d Gluconate:  + Glycerol:  + Glycogen:  neg Inositol:  + Inulin:  neg Mannitol:  neg Me-α-D-Glc:  neg Methanol:  neg Propanol:  d Salicin:  neg Sorbitol:  neg Starch:  neg Xylitol:  neg Ala:  + D-Ala:  + β-Ala:  + 4-Aminobutyrate:  + 5-Aminovalerate:  d Arg:  + Asp:  + Betaine:  + L-Citrulline:  d Glu:  + Gly:  neg Hippurate:  neg Histamine:  d His:  + Ile:  + DL-Kynurenine:  d(+) Leu:  d Lys:  d Norleucine:  neg Orn:  d Phe:  d Pro:  + Sarcosine:  d Ser:  d Thr:  neg Trigonelline:  neg Tryptamine:  neg Trp:  + Tyr:  + Val:  + Acetate:  + Aconitate:  cis(d) Adipate:  neg Azelate:  neg Benzoate:  + Butyrate:  + Caprate:  + Caproate:  d Caprylate:  + Citraconate:  neg Citrate:  + Fumarate:  + Glutarate:  + Glycerate:  + Glycolate:  neg Heptanoate:  + 3-Hydroxybutyrate:  + 3-Hydroxybenzoate:  d 4-Hydroxybenzoate:  + Isobutyrate:  neg Isovalerate:  + Itaconate:  + 2-Ketogluconate:  + 5-Ketogluconate:  d DL-Lactate:  + Levulinate:  + Malate:  d L-Malate:  + Maleate:  neg Malonate:  d L-Mandelate:  neg Mesaconate:  + Mucate:  + Nonanoate:  + Phenol:  neg Phenylacetate:  d Pimelate:  neg Propionate:  + Pyruvate:  + Quinate:  + Saccharate:  + Sebacate:  neg Suberate:  neg Succinate:  + D-Tartrate:  neg L-Tartrate:  d Valerate:  +
    ENZYME ACTIVITY
    Enzymes: General Enzymes: Carbohydrate Enzymes: Protein Enzymes: Arylamidases Enzymes: Esters/fats
    Catalase:  + Lecithinase:  + Lipase:  +
    METABOLITES - PRODUCTION & USE
    Fuel Usable Metabolites Metabolites Released Special Products Compounds Produced

    		Pigment:  green

    References

    SPECIFIC REFERENCES FOR PSEUDOMONAS CHLORORAPHIS
  • Palleroni2005bBergey - Bergey's manual of systematic bacteriology. Vol. 2, The Gammaproteobacteria Part B. Family Pseudomonadaceae, Genus I. Pseudomonas
  • Peix2007 - Reclassification of Pseudomonas aurantiaca as a synonym of Pseudomonas chlororaphis and proposal of three subspecies, P. chlororaphis subsp. chlororaphis subsp. nov., P. chlororaphis subsp. aureofaciens subsp. nov., comb. nov. and P. chlororaphis subsp. aurantiaca subsp. nov., comb. nov.
  • ...............................
    • GUT MICROBIOME COMPILATIONS AND METASTUDIES FOR PSEUDOMONAS CHLORORAPHIS
  • Lagier2016 - Culture of previously uncultured members of the human gut microbiota by culturomics.
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    • Added: January 14, 2022