Pseudomonas parafulva

Bacteria
General | Carbohydrate O/F | Substrate utilisation | Enzymes | Metabolites | Antibiotics

Overview

  • Pseudomonas parafulva is a Gram-negative, non-spore-forming, aerobic, motile, rod-shaped bacterium. It has been detected in at least 1 gut microbiome compilation study or metastudy. The DNA G+C content is 60%. Pseudomonas parafulva is likely to be transient and not a long-term gut coloniser. (Uchino2001)



  • This organism has been recovered from human faeces and rice paddies. The risk classification (www.baua.de) for this organism is 1, i.e., low risk of infection and spread. Pathogenicity status unknown, or very unlikely to be pathogenic. Likely to be transient and not a long-term gut commensal.
    • GENERAL CHARACTERISTICS (Uchino2001);
    Character Response
  • 🌡
  • Temperature tolerance:
  • strain-variable at 4(d); grows at 37℃; doesn't grow at 41℃;
  • ⥅
  • Substrates assimilated or utilised:
  • adonitol; ethanol; fructose; gluconate; glucose; mannose; propanol; ribose; β-alanine; γ-aminobutyrate; betaine; glycine; isoleucine; leucine; lysine; ornithine; phenylalanine; serine; trigonelline; tyrosine; valine; acetate; butyrate; caprate; citrate; fumarate; glycerate; 4-hydroxybenzoate; isobutyrate; isovalerate; 2-ketogluconate; 5-ketogluconate; mucate; propionate; pyruvate; succinate; valerate; 1,2-propanediol; inosine; D-malate; L-lactate; butylamine;
  • ±
  • Strain-dependent substrate utilisation:
  • L-arabinose; glucosamine; histidine; tryptamine; 3-hydroxybutyrate; malonate;
  • Active enzymes:
  • arginine dihydrolase; catalase; oxidase;
    • SPECIAL FEATURES (Uchino2001);
    Character Response
  • ✗
  • NO3➔NO2:
  • not reduced
  • Pigments:
  • pale yellow

    • Details

    GENERAL
    Lineage Physiology General Growth Tolerances Hydrol./digest./degr.
    Phylum:  Proteobacteria Class:  Gammaproteobacteria Order:  Pseudomonadales Family:  Pseudomonadaceae Genus:  Pseudomonas Gram stain:  neg O2 Relation.:  aerobic Spore:  No spore Motility:  Swimming Morphology:  Rod Pigment:  pale yellow
    Health:  Unknown
    Source:  human faeces and rice paddies
    DNA G+C(%):  60
    Low T(℃):  4(d)
    Mid T(℃):  37(+)
    High T(℃):  41(neg)
    		Starch:  neg Casein:  neg
    SUBSTRATE ASSIMILATION & UTILISATION
    Monosaccharide util/assim Oligosaccharide util/assim Other carboh. util/assim Amino acid util/assim Organic acid util/assim
    Arabinose:  neg L-Arabinose:  d Fructose:  + Fucose:  neg Galactose:  neg Glucose:  + Mannose:  + Rhamnose:  neg Ribose:  + Xylose:  neg Cellubiose:  neg Lactose:  neg Maltose:  neg Melibiose:  neg Raffinose:  neg Sucrose:  neg Trehalose:  neg Adonitol:  + D-Arabitol:  neg L-Arabitol:  neg Erythritol:  neg Ethanol:  + Gluconate:  + Glucosamine:  d Inositol:  neg Inulin:  neg Mannitol:  neg Propanol:  + Sorbitol:  neg Starch:  neg Xylitol:  neg β-Ala:  + 4-Aminobutyrate:  + Asp:  neg Betaine:  + L-Citrulline:  neg Gly:  + His:  d Ile:  + Leu:  + Lys:  + Orn:  + Phe:  + Ser:  + Thr:  neg Trigonelline:  + Tryptamine:  d Trp:  neg Tyr:  + Val:  + Acetate:  + Adipate:  neg Azelate:  neg Benzoate:  neg Butyrate:  + Caprate:  + Citraconate:  neg Citrate:  + Fumarate:  + Glycerate:  + Glycolate:  neg 3-Hydroxybutyrate:  d 3-Hydroxybenzoate:  neg 4-Hydroxybenzoate:  + Isobutyrate:  + Isovalerate:  + Itaconate:  neg 2-Ketogluconate:  + 5-Ketogluconate:  + Levulinate:  neg Malonate:  d L-Mandelate:  neg Mucate:  + Phenol:  neg Phenylacetate:  neg Propionate:  + Pyruvate:  + Sebacate:  neg Succinate:  + D-Tartrate:  neg L-Tartrate:  neg Valerate:  +
    ENZYME ACTIVITY
    Enzymes: General Enzymes: Carbohydrate Enzymes: Protein Enzymes: Arylamidases Enzymes: Esters/fats
    Oxidase:  + Catalase:  + ArgDH:  +
    METABOLITES - PRODUCTION & USE
    Fuel Usable Metabolites Metabolites Released Special Products Compounds Produced

    		Pigment:  pale yellow

    References

    SPECIFIC REFERENCES FOR PSEUDOMONAS PARAFULVA
  • Uchino2001 - Recharacterization of Pseudomonas fulva Iizuka and Komagata 1963, and proposals of Pseudomonas parafulva sp. nov. and Pseudomonas cremoricolorata sp. nov.
  • ...............................
    • GUT MICROBIOME COMPILATIONS AND METASTUDIES FOR PSEUDOMONAS PARAFULVA
  • Yang2020 - Species-Level Analysis of Human Gut Microbiota With Metataxonomics.
  • Yang2020a - Establishing high-accuracy biomarkers for colorectal cancer by comparing fecal microbiomes in patients with healthy families
  • ...............................
    • Added: December 15, 2021