Rhodanobacter ginsenosidimutans

Bacteria
General | Carbohydrate O/F | Substrate utilisation | Enzymes | Metabolites | Antibiotics

Overview

  • Rhodanobacter ginsenosidimutans is a Gram-negative, non-spore-forming, aerobic, non-motile, rod-shaped bacterium. It has been detected in at least 1 gut microbiome compilation study or metastudy. The DNA G+C content is 65.5%. Rhodanobacter ginsenosidimutans is likely to be transient and not a long-term gut coloniser. (An2009)



  • This organism has been recovered from human faeces, and soil. Pathogenicity status unknown, or very unlikely to be pathogenic. Likely to be transient and not a long-term gut commensal.
    • GENERAL CHARACTERISTICS (An2009);
    Character Response
  • 🧂
  • Salt tolerance:
  • tolerates 5% salt; Grows optimally with 0% salt.
  • pH
  • Acidity tolerance:
  • Grows optimally at pH 7.0.
  • 🌡
  • Temperature tolerance:
  • grows at 15℃; grows at 37℃; doesn't grow at 42℃;
  • ⥅
  • Substrates assimilated or utilised:
  • N-acetylglucosamine; glucose; inositol; maltose; mannose; melibiose; salicin; sucrose; alanine; histidine; valerate;
  • Active enzymes:
  • acid phosphatase; N-Ac β-glucosaminidase; catalase; esterase C4; esterase lipase C8; α-galactosidase; β-galactosidase; α-glucosidase; β-glucosidase; β-glucuronidase; Leu arylamidase; α-mannosidase; oxidase; Val arylamidase;
    • SPECIAL FEATURES (An2009);
    Character Response
  • ✗
  • Metabolites not produced:
  • indole;
  • ✗
  • Nitrate:
  • not reduced

  • Wang, X., Heazlewood, S. P., Krause, D. O., & Florin, T. H. J. (2003). Molecular characterization of the microbial species that colonize human ileal and colonic mucosa by using 16S rDNA sequence analysis. Journal of Applied Microbiology, 95(3), 508–520.

    • Details

    GENERAL
    Lineage Physiology General Growth Tolerances Hydrol./digest./degr.
    Phylum:  Proteobacteria Class:  Gammaproteobacteria Order:  Lysobacterales Family:  Rhodanobacteraceae Genus:  Rhodanobacter Gram stain:  neg O2 Relation.:  aerobic Spore:  No spore Motility:  Sessile Morphology:  Rod
    Health:  Unknown
    Source:  human faeces, and soil
    DNA G+C(%):  65.5
    Low T(℃):  15(+)
    Mid T(℃):  37(+)
    High T(℃):  42(neg)
    NaCl 3-5%:  5(+)
    Opt. pH:  7.0
    		Urea:  neg Gelatin:  neg
    CARBOHYDRATE ACID FORMATION
    Monosaccharide O/F Oligosaccharide O/F Polysaccharide O/F Polyol O/F Other O/F
    Glucose:  neg
    SUBSTRATE ASSIMILATION & UTILISATION
    Monosaccharide util/assim Oligosaccharide util/assim Other carboh. util/assim Amino acid util/assim Organic acid util/assim
    L-Arabinose:  neg Fucose:  neg Glucose:  + Mannose:  + Rhamnose:  neg Ribose:  neg Maltose:  + Melibiose:  + Sucrose:  + N_Acetyl_glucosamine:  + Gluconate:  neg Glycogen:  neg Inositol:  + Mannitol:  neg Salicin:  + Sorbitol:  neg Ala:  + His:  + Pro:  neg Ser:  neg Acetate:  neg Adipate:  neg Caprate:  neg Citrate:  neg 3-Hydroxybutyrate:  neg 3-Hydroxybenzoate:  neg 4-Hydroxybenzoate:  neg Itaconate:  neg 2-Ketogluconate:  neg 5-Ketogluconate:  neg DL-Lactate:  neg Malate:  neg Malonate:  neg Propionate:  neg Suberate:  neg Valerate:  +
    ENZYME ACTIVITY
    Enzymes: General Enzymes: Carbohydrate Enzymes: Protein Enzymes: Arylamidases Enzymes: Esters/fats
    Oxidase:  + Catalase:  + Urease:  neg Ac-β-glcamnd:  + α-Fucosidase:  neg α-Galactosidase:  + β-Galactosidase:  + α-Glucosidase:  + β-Glucosidase:  + β-Glucuronidase:  + α-Mannosidase:  + ArgDH:  neg Chymotrypsin:  neg Trypsin:  neg CystineAA:  neg LeuAA:  + ValAA:  + AcidP:  + Esterase(C4):  + EstLip(C8):  + Lipase(C14):  neg
    METABOLITES - PRODUCTION & USE
    Fuel Usable Metabolites Metabolites Released Special Products Compounds Produced

    		Indole:  neg

    References

    SPECIFIC REFERENCES FOR RHODANOBACTER GINSENOSIDIMUTANS
  • An2009 - Rhodanobacter ginsenosidimutans sp. nov., isolated from soil of a ginseng field in South Korea.
  • ...............................
    • GUT MICROBIOME COMPILATIONS AND METASTUDIES FOR RHODANOBACTER GINSENOSIDIMUTANS
  • RajilicStojanovic2014 - The first 1000 cultured species of the human gastrointestinal microbiota.
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    • Added: April 08, 2021