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Lagier, J.-C., Armougom, F., Million, M., Hugon, P., Pagnier, I., Robert, C., Bittar, F., Fournous, G., Gimenez, G., Maraninchi, M., Trape, J.-F., Koonin, E. V., La Scola, B., & Raoult, D. (2012). Microbial culturomics: paradigm shift in the human gut microbiome study. Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases, 18(12), 1185–1193.
Lineage | Physiology | General | Growth Tolerances | Hydrol./digest./degr. |
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Health: Unknown
Source: human faeces, and wetlands
DNA G+C(%): 54.4-56.5
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Opt. T: 15-26℃
Low T(℃): 4(+)
Mid T(℃): 32(+)
NaCl 0.5-2%: 0.5(neg)
Opt. pH: 5.0-6.2
pH 4.2-5.9: 4.2(+)
pH 6.0-8.0: 7.5(+)
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Monosaccharide O/F | Oligosaccharide O/F | Polysaccharide O/F | Polyol O/F | Other O/F |
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Monosaccharide util/assim | Oligosaccharide util/assim | Other carboh. util/assim | Amino acid util/assim | Organic acid util/assim |
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Enzymes: General | Enzymes: Carbohydrate | Enzymes: Protein | Enzymes: Arylamidases | Enzymes: Esters/fats |
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Penicillins & Penems (μg/mL) | Cephalosporins (μg/mL) | Aminoglycosides (μg/mL) | Macrolides (μg/mL) | Quinolones (μg/mL) |
ampicillin: R(10; disc)
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gentamicin: S(10; disc)
kanamycin: S(30; disc)
neomycin: S(10; disc)
streptomycin: R(10; disc)
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Tetracyclines (μg/mL) | Vancomycin Class (μg/mL) | Polypep/ketides (μg/mL) | Heterocycles (μg/mL) | Other (μg/mL) |
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chloramphenicol: R(30; disc)
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lincomycin: R(10; disc)
novobiocin: R(30; disc)
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