Sphingomonas yabuuchiae

Bacteria
General | Carbohydrate O/F | Substrate utilisation | Enzymes | Metabolites | Antibiotics

Overview

  • Sphingomonas yabuuchiae is a Gram-negative, non-spore-forming, aerobic, rod-shaped bacterium. It has been detected in at least 1 gut microbiome compilation study or metastudy. The DNA G+C content is 66.1%. Sphingomonas yabuuchiae is probably a rare gut coloniser. (Li2004a)



  • This organism has been recovered from an air sample. The risk classification (www.baua.de) for this organism is 1, i.e., low risk of infection and spread. Pathogenicity status unknown, or very unlikely to be pathogenic. A possible gut commensal.
    • GENERAL CHARACTERISTICS (Li2004a);
    Character Response
  • Substrates hydrolysed or digested:
  • starch;
  • 🌡
  • Temperature tolerance:
  • grows at 30℃;
  • ⥅
  • Substrates assimilated or utilised:
  • L-arabinose; cellubiose; fructose; galactose; glucose; glycerol; lactose; maltose; mannose; melibiose; raffinose; sucrose; trehalose;
  • Active enzymes:
  • catalase;
    • SPECIAL FEATURES (Li2004a);
    Character Response
  • ✗
  • Nitrate:
  • not reduced
  • ±
  • Pigments:
  • deep yellow

    • Details

    GENERAL
    Lineage Physiology General Growth Tolerances Hydrol./digest./degr.
    Phylum:  Proteobacteria Class:  Alphaproteobacteria Order:  Sphingomonadales Family:  Sphingomonadaceae Genus:  Sphingomonas Gram stain:  neg O2 Relation.:  aerobic Spore:  No spore Morphology:  Rod Pigment:  deep yellow
    Health:  Unknown
    Source:  an air sample
    DNA G+C(%):  66.1
    Lower T(℃):  30(+)
    		Gelatin:  neg Starch:  + Tween:  80(+)
    CARBOHYDRATE ACID FORMATION
    Monosaccharide O/F Oligosaccharide O/F Polysaccharide O/F Polyol O/F Other O/F
    Glucose:  neg
    SUBSTRATE ASSIMILATION & UTILISATION
    Monosaccharide util/assim Oligosaccharide util/assim Other carboh. util/assim Amino acid util/assim Organic acid util/assim
    L-Arabinose:  + Fructose:  + Galactose:  + Glucose:  + Mannose:  + Rhamnose:  neg Cellubiose:  + Lactose:  + Maltose:  + Melibiose:  + Raffinose:  + Sucrose:  + D-Turanose:  neg Trehalose:  + N_Acetyl_glucosamine:  w Adonitol:  neg Erythritol:  neg Gluconate:  w Glycerol:  + Inositol:  neg Mannitol:  neg Sorbitol:  neg D-Ala:  neg Adipate:  w Caprate:  neg Citrate:  w Formate:  neg Itaconate:  neg Propionate:  neg
    ENZYME ACTIVITY
    Enzymes: General Enzymes: Carbohydrate Enzymes: Protein Enzymes: Arylamidases Enzymes: Esters/fats
    Oxidase:  neg Catalase:  +
    METABOLITES - PRODUCTION & USE
    Fuel Usable Metabolites Metabolites Released Special Products Compounds Produced

    		Pigment:  deep yellow

    References

    SPECIFIC REFERENCES FOR SPHINGOMONAS YABUUCHIAE
  • Li2004a - Sphingomonas yabuuchiae sp. nov. and Brevundimonas nasdae sp. nov., isolated from the Russian space laboratory Mir.
  • ...............................
    • GUT MICROBIOME COMPILATIONS AND METASTUDIES FOR SPHINGOMONAS YABUUCHIAE
  • PerezBrocal2015 - Metagenomic Analysis of Crohn's Disease Patients Identifies Changes in the Virome and Microbiome Related to Disease Status and Therapy, and Detects Potential Interactions and Biomarkers
  • ...............................
    • Added: October 10, 2022