All but a few species have been isolated from, or detected in, human faeces, intestinal mucosa or other parts of the GI tract. Only organisms that have been cultured and characterised to some degree have been included.
Bacteria | Phylum | O2 Tol | Pathogenicity | Studies | Num Studies |
---|---|---|---|---|---|
Acidaminococcus fermentans | Firmicutes | ANA | Known Pathogen | Moore1974, Finegold1974, Holdeman1976, Finegold1977, Benno1984, Benno1989, MacFarlane2004, Zupancic2012, Nielsen2014, RajilicStojanovic2014, Lagier2016, Forster2019, King2019, Byrd2020, Yang2020, New2022, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Vachida2019, Minerbi2019 | 23 |
Akkermansia muciniphila | Verrucomicrobia | SANA | Non/unknown Pathogen | Walker2011, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, King2019, Byrd2020, De2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, Minerbi2019, Li2019b, Karlsson2013, PerezBrocal2015 | 26 |
Alistipes putredinis | Bacteroidetes | SANA | Opportunistic Pathogen | Finegold1974, Finegold1977, Benno1989, Mangin2004, Walker2011, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Lagier2016, Rothschild2018, Forster2019, Byrd2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Karlsson2013 | 26 |
Alistipes shahii | Bacteroidetes | SANA | Rare Opportunist | Tyakht2013, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, Chung2019, Forster, King2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Karlsson2013 | 23 |
Anaerobutyricum hallii | Firmicutes | SANA | Non/unknown Pathogen | Moore1974, Holdeman1976, Finegold1977, Walker2011, deGoffau2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, Karlsson2013 | 27 |
Bacteroides caccae | Bacteroidetes | ANA | Opportunistic Pathogen | Benno1989, Favier2002, MacFarlane2004, Woodmansey2004, McLaughlin2010, Walker2011, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Chung2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Chung2019, Forster2019, King2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Moore1995, Li2019b, LeChatelier2013, Karlsson2013, PerezBrocal2015 | 38 |
Bacteroides eggerthii | Bacteroidetes | SANA | Opportunistic Pathogen | Benno1984, Benno1986, Benno1989, Woodmansey2004, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Chung2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, Byrd2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Li2019b, Karlsson2013, PerezBrocal2015 | 29 |
Bacteroides finegoldii | Bacteroidetes | SANA | Non/unknown Pathogen | McLaughlin2010, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Lagier2016, Rothschild2018, Forster2019, Byrd2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, LeChatelier2013, Karlsson2013 | 24 |
Bacteroides fragilis | Bacteroidetes | SANA | Opportunistic Pathogen | Finegold1974, Holdeman1976, Finegold1977, Benno1984, Benno1986, Benno1989, Mangin2004, MacFarlane2004, Woodmansey2004, Wang2005, McLaughlin2010, Walker2011, Zupancic2012, deGoffau2013, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Chung2019, Forster2019, King2019, Byrd2020, De2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Qin2012, Minerbi2019, Moore1995, Li2019b, LeChatelier2013, Karlsson2013, PerezBrocal2015 | 47 |
Bacteroides intestinalis | Bacteroidetes | SANA | Rare Opportunist | Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Cassir2015, Lagier2016, Rothschild2018, Zou2019, Forster2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Zeller2014, Wang2018, Vachida2019, Urban2020, Minerbi2019, Karlsson2013 | 23 |
Bacteroides ovatus | Bacteroidetes | ANA | Rare Opportunist | Finegold1974, Holdeman1976, Finegold1977, Benno1984, Benno1986, Benno1989, Mangin2004, MacFarlane2004, Woodmansey2004, McLaughlin2010, Walker2011, Zupancic2012, deGoffau2013, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Browne2016, Chung2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Chung2019, Forster2019, King2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Moore1995, Li2019b, LeChatelier2013, Karlsson2013, PerezBrocal2015 | 46 |
Bacteroides stercoris | Bacteroidetes | ANA | Rare Opportunist | Benno1989, Mangin2004, MacFarlane2004, McLaughlin2010, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Chung2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Chung2019, Forster2019, Byrd2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Moore1995, Karlsson2013 | 31 |
Bacteroides thetaiotaomicron | Bacteroidetes | SANA | Opportunistic Infection | Finegold1974, Holdeman1976, Finegold1977, Benno1984, Benno1986, Benno1989, Mangin2004, MacFarlane2004, Woodmansey2004, Wang2005, Frank2007, McLaughlin2010, Walker2011, deGoffau2013, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Cassir2015, Browne2016, Chung2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, King2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Moore1995, LeChatelier2013 | 43 |
Bacteroides uniformis | Bacteroidetes | ANA | Rare Opportunist | Benno1984, Benno1986, Benno1989, Mangin2004, MacFarlane2004, Woodmansey2004, Wang2005, McLaughlin2010, PerisBondia2011, Walker2011, Zupancic2012, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Browne2016, Chung2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Chung2019, Forster2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Moore1995, Li2019b, LeChatelier2013, Karlsson2013, PerezBrocal2015 | 43 |
Bacteroides xylanisolvens | Bacteroidetes | SANA | Non/unknown Pathogen | McLaughlin2010, Walker2011, Tyakht2013, RajilicStojanovic2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Chung2019, Forster2019, King2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, LeChatelier2013 | 25 |
Bifidobacterium adolescentis | Actinobacteria | ANA | Opportunistic Infection | Moore1974, Finegold1974, Holdeman1976, Finegold1977, Benno1984, Benno1986, Benno1989, MacFarlane2004, Woodmansey2004, deGoffau2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, King2019, Byrd2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Minerbi2019, Moore1995, Li2019b, Karlsson2013 | 35 |
Bifidobacterium bifidum | Actinobacteria | ANA | Non/unknown Pathogen | Moore1974, Finegold1974, Benno1984, Benno1986, Benno1989, MacFarlane2004, Woodmansey2004, Pandey2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, King2019, Byrd2020, De2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Minerbi2019, Karlsson2013 | 31 |
Bifidobacterium breve | Actinobacteria | ANA | Rare Opportunist | Finegold1974, Benno1984, Favier2002, MacFarlane2004, Woodmansey2004, Pandey2012, Tyakht2013, Aujoulat2014, Nielsen2014, RajilicStojanovic2014, Cassir2015, Lagier2016, Almeida2019, Forster2019, King2019, Byrd2020, New2022, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Vachida2019, Wang2020a | 23 |
Bifidobacterium longum subsp. longum | Actinobacteria | ANA | Rare Opportunist | Moore1974, Finegold1974, Holdeman1976, Finegold1977, Benno1984, Benno1986, Benno1989, MacFarlane2004, Woodmansey2004, Tyakht2013, Aujoulat2014, Nielsen2014, RajilicStojanovic2014, Cassir2015, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, King2019, Byrd2020, De2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Moore1995, Li2019b, LeChatelier2013, Karlsson2013, PerezBrocal2015 | 39 |
Bifidobacterium pseudocatenulatum | Actinobacteria | ANA | Non/unknown Pathogen | Favier2002, MacFarlane2004, Woodmansey2004, deGoffau2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Chung2016, Lagier2016, Rothschild2018, Zou2019, Forster2019, Byrd2020, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Vachida2019, Wang2020a, Minerbi2019, Karlsson2013 | 26 |
Bilophila wadsworthia | Desulfobacterota | SANA | Opportunistic Pathogen | McLaughlin2010, Walker2011, Zupancic2012, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, Chung2019, Forster2019, Byrd2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019 | 25 |
Blautia obeum | Firmicutes | SANA | Non/unknown Pathogen | Mangin2004, Woodmansey2004, Walker2011, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Forster2019, King2019, Byrd2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Moore1995, LeChatelier2013, Karlsson2013, PerezBrocal2015 | 31 |
Blautia producta | Firmicutes | SANA | Non/unknown Pathogen | Moore1974, Finegold1974, Holdeman1976, Finegold1977, Benno1984, Benno1986, Benno1989, Woodmansey2004, Walker2011, Zupancic2012, RajilicStojanovic2014, Lagier2016, Forster2019, Byrd2020, New2022, Dubinkina2017, Hu2019, Jie2017, Vachida2019, Wang2020a, Moore1995, Li2019b, PerezBrocal2015 | 23 |
Butyrivibrio crossotus | Firmicutes | SANA | Non/unknown Pathogen | Walker2011, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Lagier2016, Rothschild2018, Forster2019, Byrd2020, De2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Qin2012, Minerbi2019, Moore1995, LeChatelier2013, Karlsson2013 | 23 |
Clostridioides difficile | Firmicutes | SANA | Causes Illness | Finegold1974, Benno1984, Benno1989, Woodmansey2004, Walker2011, Pandey2012, Zupancic2012, Tyakht2013, Aujoulat2014, RajilicStojanovic2014, Salonen2014, Cassir2015, Lagier2016, Almeida2019, Forster2019, King2019, Byrd2020, Byrd2020, De2020, New2022, Dubinkina2017, Hu2019, Zeller2014, Vachida2019, Wang2020a, LeChatelier2013, PerezBrocal2015 | 27 |
Clostridium butyricum | Firmicutes | ANA | Opportunistic Pathogen | Finegold1977, Benno1984, Benno1986, Woodmansey2004, McLaughlin2010, Walker2011, Zupancic2012, Pfleiderer2013, Aujoulat2014, RajilicStojanovic2014, Cassir2015, Lagier2016, Zou2019, Almeida2019, Byrd2020, Yang2020, New2022, Dubinkina2017, Hu2019, Jeong2021, Zeller2014, Vachida2019, PerezBrocal2015 | 23 |
Clostridium innocuum | Firmicutes | SANA | Opportunistic Pathogen | Moore1974, Holdeman1976, Finegold1974, Finegold1977, Benno1984, Benno1986, Benno1989, Mangin2004, MacFarlane2004, Woodmansey2004, Nam2008a, Walker2011, Zupancic2012, Pfleiderer2013, Aujoulat2014, Nielsen2014, RajilicStojanovic2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Yang2020, New2022, Chen2020, Hu2019, Vachida2019 | 26 |
Clostridium leptum | Firmicutes | SANA | Non/unknown Pathogen | McLaughlin2010, Walker2011, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Lagier2016, Rothschild2018, Zou2019, Byrd2020, De2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Qin2012, Minerbi2019, Karlsson2013 | 26 |
Clostridium perfringens | Firmicutes | SANA | Known Pathogen | Finegold1974, Finegold1977, Benno1984, Taylor1985, Benno1986, Benno1989, Mangin2004, Woodmansey2004, McLaughlin2010, Walker2011, Zupancic2012, deGoffau2013, Pfleiderer2013, Tyakht2013, Aujoulat2014, RajilicStojanovic2014, Cassir2015, Browne2016, Lagier2016, Zou2019, Almeida2019, Byrd2020, Yang2020, New2022, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Vachida2019, Wang2020a, Moore1995, Li2019b, PerezBrocal2015 | 33 |
Clostridium symbiosum | Firmicutes | SANA | Opportunistic Pathogen | Walker2011, Pfleiderer2013, Tyakht2013, Aujoulat2014, Nielsen2014, RajilicStojanovic2014, Salonen2014, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Byrd2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Qin2012, LeChatelier2013, Karlsson2013 | 25 |
Collinsella aerofaciens | Actinobacteria | SANA | Opportunistic Pathogen | Moore1974, Holdeman1976, Finegold1974, Finegold1977, Benno1984, Benno1986, Benno1989, MacFarlane2004, Woodmansey2004, McLaughlin2010, Walker2011, Zupancic2012, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Chung2019, Forster2019, King2019, Byrd2020, De2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Vachida2019, Wang2020a, Minerbi2019, Moore1995, Li2019b, Karlsson2013, PerezBrocal2015 | 39 |
Coprococcus catus | Firmicutes | SANA | Non/unknown Pathogen | Moore1974, PerisBondia2011, Walker2011, Zupancic2012, Tyakht2013, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, Chung2019, Forster2019, King2019, De2020, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, LeChatelier2013, Karlsson2013, PerezBrocal2015 | 24 |
Coprococcus comes | Firmicutes | SANA | Opportunistic Infection | Moore1974, Holdeman1976, Finegold1977, Benno1986, Benno1989, McLaughlin2010, PerisBondia2011, Walker2011, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Chung2019, Forster2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Qin2012, Minerbi2019, Moore1995, LeChatelier2013, Karlsson2013 | 35 |
Coprococcus eutactus | Firmicutes | SANA | Non/unknown Pathogen | Moore1974, Benno1986, PerisBondia2011, Walker2011, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Forster2019, Byrd2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Minerbi2019, Li2019b, LeChatelier2013, Karlsson2013, PerezBrocal2015 | 28 |
Dorea formicigenerans | Firmicutes | SANA | Non/unknown Pathogen | Moore1974, McLaughlin2010, Walker2011, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Lagier2016, Rothschild2018, Zou2019, Forster2019, Byrd2020, De2020, Yang2020, Chen2020, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, Minerbi2019, Li2019b, LeChatelier2013, PerezBrocal2015 | 28 |
Dorea longicatena | Firmicutes | SANA | Non/unknown Pathogen | McLaughlin2010, Walker2011, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, Byrd2020, De2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, Minerbi2019, LeChatelier2013, Karlsson2013 | 26 |
Eggerthella lenta | Actinobacteria | SANA | Known Pathogen | Finegold1974, Finegold1977, Benno1984, Benno1986, Benno1989, Woodmansey2004, McLaughlin2010, Walker2011, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Cassir2015, Lagier2016, Rothschild2018, Zou2019, Forster2019, King2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, Minerbi2019, Li2019b, LeChatelier2013, PerezBrocal2015 | 35 |
Enterocloster bolteae | Firmicutes | SANA | Opportunistic Pathogen | McLaughlin2010, Walker2011, Zupancic2012, deGoffau2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, Almeida2019, King2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, LeChatelier2013 | 26 |
Enterocloster clostridioformis | Firmicutes | SANA | Opportunistic Pathogen | Moore1974, Finegold1974, Holdeman1976, Finegold1977, Benno1984, Taylor1985, Benno1986, MacFarlane2004, Woodmansey2004, McLaughlin2010, Walker2011, deGoffau2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Lagier2016, Almeida2019, Byrd2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Vachida2019, Qin2012, LeChatelier2013, Karlsson2013 | 27 |
Enterococcus faecalis | Firmicutes | FANA | Opportunistic Pathogen | Finegold1977, Benno1986, Benno1989, Mangin2004, MacFarlane2004, Woodmansey2004, Pfleiderer2013, Tyakht2013, Aujoulat2014, RajilicStojanovic2014, Cassir2015, Lagier2016, Zou2019, Almeida2019, Chung2019, Forster2019, King2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Vachida2019, Wang2020a, Urban2020, Karlsson2013 | 29 |
Enterococcus faecium | Firmicutes | Micr | Opportunistic Pathogen | Finegold1977, Benno1984, Benno1986, Benno1989, Woodmansey2004, McLaughlin2010, Hoyles2012, Dubourg2013, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Cassir2015, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, King2019, Byrd2020, De2020, Yang2020, New2022, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Vachida2019, Wang2020a, Moore1995 | 30 |
Erysipelatoclostridium ramosum | Firmicutes | SANA | Opportunistic Infection | Moore1974, Holdeman1976, Finegold1977, Benno1984, Taylor1985, Benno1986, Benno1989, Mangin2004, MacFarlane2004, Woodmansey2004, McLaughlin2010, Walker2011, Zupancic2012, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Chung2016, Lagier2016, Zou2019, Forster2019, Byrd2020, Yang2020, New2022, Chen2020, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, Minerbi2019, Moore1995, LeChatelier2013, Karlsson2013 | 38 |
Escherichia coli | Proteobacteria | FANA | Opportunistic Pathogen | Moore1974, Holdeman1976, Finegold1977, Benno1984, Benno1986, Benno1989, Favier2002, Mangin2004, MacFarlane2004, Woodmansey2004, Wang2005, Bik2006, Frank2007, McLaughlin2010, Walker2011, Pandey2012, Dubourg2013, Pfleiderer2013, Tyakht2013, Aujoulat2014, Nielsen2014, RajilicStojanovic2014, Salonen2014, Cassir2015, Lagier2016, Rothschild2018, Zou2019, Forster2019, King2019, Byrd2020, De2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Qin2012, Moore1995 | 44 |
Eubacterium rectale | Firmicutes | SANA | Non/unknown Pathogen | Finegold1974, Holdeman1976, Finegold1977, Benno1984, Benno1986, Benno1989, Mangin2004, MacFarlane2004, Woodmansey2004, McLaughlin2010, Walker2011, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Browne2016, Chung2016, Lagier2016, Rothschild2018, Zou2019, Forster2019, King2019, Yang2020, Chen2020, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Qin2012, Moore1995, LeChatelier2013, Karlsson2013 | 36 |
Eubacterium siraeum | Firmicutes | SANA | Non/unknown Pathogen | Walker2011, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, King2019, De2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Qin2012, LeChatelier2013, Karlsson2013 | 25 |
Eubacterium ventriosum | Firmicutes | SANA | Opportunistic Pathogen | Moore1974, Finegold1974, Holdeman1976, Finegold1977, Woodmansey2004, Walker2011, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Lagier2016, Rothschild2018, Zou2019, Byrd2020, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, Moore1995, Karlsson2013 | 25 |
Faecalibacterium prausnitzii | Firmicutes | SANA | Opportunistic Pathogen | Benno1986, Benno1989, Woodmansey2004, Wang2005, Nam2008a, McLaughlin2010, PerisBondia2011, Walker2011, Zupancic2012, deGoffau2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Cassir2015, Browne2016, Chung2016, Lagier2016, Rothschild2018, Zou2019, Chung2019, Forster2019, King2019, Byrd2020, De2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Qin2012, Minerbi2019, Moore1995, LeChatelier2013, Karlsson2013, PerezBrocal2015 | 43 |
Faecalitalea cylindroides | Firmicutes | SANA | Non/unknown Pathogen | Finegold1974, Holdeman1976, Finegold1977, Benno1989, Woodmansey2004, Tyakht2013, RajilicStojanovic2014, Salonen2014, Lagier2016, Forster2019, King2019, Byrd2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Li2019b, LeChatelier2013, Karlsson2013 | 23 |
Finegoldia magna | Firmicutes | SANA | Opportunistic Pathogen | Finegold1974, Holdeman1976, Finegold1977, Benno1984, Benno1986, Benno1989, Walker2011, Dubourg2013, Pfleiderer2013, Tyakht2013, RajilicStojanovic2014, Cassir2015, Lagier2016, Rothschild2018, Almeida2019, Forster2019, Byrd2020, Yang2020, New2022, Dubinkina2017, Hu2019, Zeller2014, Vachida2019 | 23 |
Flavonifractor plautii | Firmicutes | SANA | Non/unknown Pathogen | Mangin2004, Woodmansey2004, Wang2005, McLaughlin2010, Walker2011, Zupancic2012, Pfleiderer2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Browne2016, Lagier2016, Rothschild2018, Chung2019, Forster2019, King2019, Byrd2020, De2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Vachida2019, Wang2020a, Minerbi2019 | 27 |
Haemophilus parainfluenzae | Proteobacteria | FANA | Opportunistic Pathogen | Wang2005, McLaughlin2010, Zupancic2012, Nielsen2014, RajilicStojanovic2014, Cassir2015, Lagier2016, Rothschild2018, Almeida2019, King2019, Byrd2020, De2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Qin2012, Minerbi2019, Li2019b, PerezBrocal2015 | 26 |
Hungatella hathewayi | Firmicutes | SANA | Rare Opportunist | McLaughlin2010, Walker2011, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Forster2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Vachida2019, Qin2012, Minerbi2019, LeChatelier2013, PerezBrocal2015 | 23 |
Intestinibacter bartlettii | Firmicutes | SANA | Non/unknown Pathogen | McLaughlin2010, Walker2011, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Chung2016, Lagier2016, Rothschild2018, Forster2019, Byrd2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, Minerbi2019, Karlsson2013 | 24 |
Klebsiella pneumoniae | Proteobacteria | Micr | Opportunistic Pathogen | Finegold1977, Benno1984, Taylor1985, Benno1986, Benno1989, Mangin2004, Woodmansey2004, McLaughlin2010, Pandey2012, Pfleiderer2013, Tyakht2013, Aujoulat2014, RajilicStojanovic2014, Salonen2014, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, King2019, Byrd2020, De2020, Yang2020, New2022, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Vachida2019, Wang2020a, Minerbi2019 | 31 |
Lachnospira eligens | Firmicutes | SANA | Non/unknown Pathogen | Moore1974, Holdeman1976, Finegold1977, Mangin2004, Woodmansey2004, Nam2008a, McLaughlin2010, Walker2011, Hoyles2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Chung2016, Lagier2016, Rothschild2018, Zou2019, King2019, Byrd2020, De2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, Minerbi2019, Moore1995, LeChatelier2013, Karlsson2013 | 36 |
Lactobacillus acidophilus | Firmicutes | FANA | Rare Opportunist | Moore1974, Finegold1974, Finegold1977, Benno1984, Heilig2002, Woodmansey2004, Zupancic2012, deGoffau2013, Tyakht2013, RajilicStojanovic2014, Lagier2016, Rothschild2018, Almeida2019, Forster2019, King2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Zeller2014, Vachida2019, Moore1995 | 23 |
Lactococcus lactis subsp. lactis | Firmicutes | FANA | Opportunistic Infection | Finegold1974, Finegold1977, Taylor1985, Mangin2004, Woodmansey2004, Zupancic2012, Pfleiderer2013, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, Almeida2019, King2019, Byrd2020, Yang2020, New2022, Chen2020, Hu2019, Jie2017, Zeller2014, Vachida2019, Urban2020, Karlsson2013 | 23 |
Ligilactobacillus ruminis | Firmicutes | ANA | Non/unknown Pathogen | Heilig2002, Walker2011, Pandey2012, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, King2019, Byrd2020, Yang2020, New2022, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Vachida2019, Minerbi2019, Li2019b | 23 |
Ligilactobacillus salivarius | Firmicutes | FANA | Opportunistic Pathogen | Benno1984, Benno1986, Benno1989, Heilig2002, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Lagier2016, Zou2019, Almeida2019, Forster2019, Byrd2020, Yang2020, New2022, Dubinkina2017, Hu2019, Zeller2014, Vachida2019, Wang2020a, Urban2020, Qin2012, Moore1995, PerezBrocal2015 | 25 |
Limosilactobacillus fermentum | Firmicutes | FANA | Opportunistic Pathogen | Moore1974, Finegold1974, Finegold1977, Benno1984, Heilig2002, Bik2006, McLaughlin2010, Zupancic2012, Tyakht2013, RajilicStojanovic2014, Lagier2016, Zou2019, Almeida2019, Forster2019, Byrd2020, New2022, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Vachida2019, Wang2020a, Urban2020 | 23 |
Odoribacter splanchnicus | Bacteroidetes | SANA | Opportunistic Pathogen | Holdeman1976, Finegold1977, Benno1986, Benno1989, Mangin2004, MacFarlane2004, McLaughlin2010, Walker2011, Nielsen2014, RajilicStojanovic2014, Salonen2014, Lagier2016, Rothschild2018, Zou2019, Chung2019, Forster2019, King2019, Byrd2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Minerbi2019 | 29 |
Parabacteroides distasonis | Bacteroidetes | SANA | Rare Opportunist | Finegold1974, Holdeman1976, Finegold1977, Benno1984, Benno1986, Benno1989, Mangin2004, MacFarlane2004, Woodmansey2004, Wang2005, McLaughlin2010, Walker2011, Zupancic2012, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Chung2019, Forster2019, King2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Qin2012, Minerbi2019, Moore1995, Li2019b, PerezBrocal2015 | 43 |
Parabacteroides merdae | Bacteroidetes | ANA | Rare Opportunist | Benno1989, McLaughlin2010, Walker2011, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, Byrd2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Karlsson2013 | 27 |
Phocaeicola coprocola | Bacteroidetes | SANA | Non/unknown Pathogen | McLaughlin2010, Walker2011, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, Byrd2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Vachida2019, Wang2020a, Urban2020, Qin2012, Minerbi2019, Karlsson2013 | 22 |
Phocaeicola coprophilus | Bacteroidetes | ANA | Non/unknown Pathogen | Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, Forster2019, Byrd2020, Yang2020, New2022, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Li2019b, PerezBrocal2015 | 21 |
Phocaeicola dorei | Bacteroidetes | ANA | Rare Opportunist | McLaughlin2010, PerisBondia2011, Walker2011, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, King2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, LeChatelier2013, Karlsson2013 | 28 |
Phocaeicola plebeius | Bacteroidetes | SANA | Non/unknown Pathogen | Walker2011, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Lagier2016, Rothschild2018, Zou2019, Forster2019, Byrd2020, De2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Li2019b, Karlsson2013, PerezBrocal2015 | 26 |
Phocaeicola vulgatus | Bacteroidetes | SANA | Opportunistic Infection | Finegold1974, Holdeman1976, Finegold1977, Benno1984, Benno1986, Benno1989, Mangin2004, MacFarlane2004, Woodmansey2004, McLaughlin2010, Walker2011, Zupancic2012, deGoffau2013, Pfleiderer2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, King2019, Byrd2020, De2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Moore1995, LeChatelier2013, Karlsson2013 | 43 |
Prevotella copri | Bacteroidetes | SANA | Non/unknown Pathogen | McLaughlin2010, Walker2011, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Forster2019, Byrd2020, De2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Minerbi2019, Li2019b, Karlsson2013, PerezBrocal2015 | 28 |
Roseburia faecis | Firmicutes | SANA | Non/unknown Pathogen | McLaughlin2010, PerisBondia2011, Walker2011, Zupancic2012, deGoffau2013, RajilicStojanovic2014, Browne2016, Lagier2016, Zou2019, Forster2019, Byrd2020, Yang2020, Jeong2021, Minerbi2019, Li2019b, PerezBrocal2015 | 16 |
Roseburia hominis | Firmicutes | SANA | Non/unknown Pathogen | PerisBondia2011, Walker2011, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, King2019, Byrd2020, De2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, Minerbi2019 | 25 |
Roseburia intestinalis | Firmicutes | SANA | Non/unknown Pathogen | McLaughlin2010, PerisBondia2011, Walker2011, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Forster2019, King2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, Minerbi2019, LeChatelier2013, Karlsson2013 | 29 |
Roseburia inulinivorans | Firmicutes | SANA | Non/unknown Pathogen | McLaughlin2010, PerisBondia2011, Walker2011, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Forster2019, Byrd2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, Minerbi2019, LeChatelier2013, Karlsson2013 | 26 |
Ruminococcus bromii | Firmicutes | SANA | Non/unknown Pathogen | Finegold1974, Holdeman1976, Finegold1977, Benno1986, Benno1989, Mangin2004, PerisBondia2011, Walker2011, Zupancic2012, Tyakht2013, RajilicStojanovic2014, Salonen2014, Browne2016, Lagier2016, Rothschild2018, Zou2019, Chung2019, Forster2019, Byrd2020, De2020, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Qin2012, Minerbi2019, Moore1995, Li2019b, LeChatelier2013, Karlsson2013, PerezBrocal2015 | 37 |
Ruminococcus callidus | Firmicutes | SANA | Non/unknown Pathogen | Moore1974, Benno1984, Benno1986, Benno1989, McLaughlin2010, Walker2011, Zupancic2012, deGoffau2013, RajilicStojanovic2014, Salonen2014, Lagier2016, Rothschild2018, Zou2019, Forster2019, Byrd2020, Yang2020, Chen2020, Hu2019, Jeong2021, Vachida2019, Minerbi2019, Moore1995, PerezBrocal2015 | 23 |
Ruminococcus gnavus | Firmicutes | SANA | Opportunistic Pathogen | Benno1986, Benno1989, Mangin2004, McLaughlin2010, Walker2011, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Cassir2015, Browne2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Qin2012, Moore1995, Li2019b, LeChatelier2013, Karlsson2013, PerezBrocal2015 | 33 |
Ruminococcus lactaris | Firmicutes | SANA | Non/unknown Pathogen | Benno1986, Benno1989, Nam2008a, Walker2011, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Lagier2016, Rothschild2018, Zou2019, Forster2019, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Minerbi2019, LeChatelier2013, Karlsson2013 | 24 |
Ruminococcus torques | Firmicutes | SANA | Non/unknown Pathogen | Nam2008a, Walker2011, Zupancic2012, Dubourg2013, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Cassir2015, Browne2016, Lagier2016, Rothschild2018, Zou2019, Forster2019, King2019, Yang2020, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020, Qin2012, Moore1995, Li2019b, LeChatelier2013, Karlsson2013, PerezBrocal2015 | 31 |
Staphylococcus epidermidis | Firmicutes | FANA | Opportunistic Pathogen | Moore1974, Finegold1974, Holdeman1976, Finegold1977, Benno1984, Taylor1985, Benno1986, Benno1989, Woodmansey2004, McLaughlin2010, Dubourg2013, Pfleiderer2013, Aujoulat2014, RajilicStojanovic2014, Cassir2015, Lagier2016, Zou2019, Almeida2019, Forster2019, Byrd2020, New2022, Zeller2014, PerezBrocal2015 | 23 |
Streptococcus anginosus | Firmicutes | ANA | Opportunistic Pathogen | Wang2005, McLaughlin2010, Walker2011, Zupancic2012, Tyakht2013, Aujoulat2014, RajilicStojanovic2014, Lagier2016, Rothschild2018, Almeida2019, Forster2019, De2020, Yang2020, New2022, Byrd2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Vachida2019, Li2019b, PerezBrocal2015 | 24 |
Streptococcus parasanguinis | Firmicutes | FANA | Opportunistic Pathogen | Mangin2004, MacFarlane2004, Woodmansey2004, Wang2005, Bik2006, McLaughlin2010, Walker2011, Pandey2012, Zupancic2012, Dubourg2013, Pfleiderer2013, Aujoulat2014, Nielsen2014, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, King2019, Byrd2020, De2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Vachida2019 | 31 |
Streptococcus salivarius | Firmicutes | FANA | Opportunistic Pathogen | Finegold1974, Finegold1977, Benno1984, Benno1986, Benno1989, Favier2002, Mangin2004, MacFarlane2004, Woodmansey2004, Wang2005, Bik2006, McLaughlin2010, Walker2011, Pandey2012, Zupancic2012, Dubourg2013, Pfleiderer2013, Aujoulat2014, Nielsen2014, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, King2019, Byrd2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Urban2020 | 38 |
Streptococcus thermophilus | Firmicutes | FANA | Non/unknown Pathogen | Favier2002, McLaughlin2010, Zupancic2012, Tyakht2013, Aujoulat2014, Nielsen2014, RajilicStojanovic2014, Cassir2015, Lagier2016, Rothschild2018, Almeida2019, King2019, Byrd2020, Byrd2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a | 23 |
Sutterella wadsworthensis | Proteobacteria | Micr | Possible Pathogen | Wang2005, McLaughlin2010, Walker2011, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Chung2016, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Chung2019, Forster2019, Byrd2020, Yang2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Wang2018, Vachida2019, Wang2020a, Minerbi2019 | 27 |
Tyzzerella nexilis | Firmicutes | SANA | Non/unknown Pathogen | Moore1974, Finegold1977, Mangin2004, Frank2007, McLaughlin2010, Walker2011, Zupancic2012, Tyakht2013, Nielsen2014, RajilicStojanovic2014, Salonen2014, Lagier2016, Rothschild2018, Zou2019, Byrd2020, Chen2020, Dubinkina2017, Hu2019, Jie2017, Vachida2019, Qin2012, LeChatelier2013, Karlsson2013 | 23 |
Veillonella atypica | Firmicutes | SANA | Rare Opportunist | Mangin2004, MacFarlane2004, Woodmansey2004, Wang2005, Bik2006, DalBello2006, McLaughlin2010, Walker2011, Nielsen2014, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Forster2019, Byrd2020, De2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Jie2017, Zeller2014, Vachida2019, Wang2020a | 26 |
Veillonella parvula | Firmicutes | SANA | Known Pathogen | Finegold1974, Finegold1977, Benno1984, Taylor1985, Benno1986, Benno1989, MacFarlane2004, McLaughlin2010, Dubourg2013, Aujoulat2014, Nielsen2014, RajilicStojanovic2014, Lagier2016, Rothschild2018, Zou2019, Almeida2019, Chung2019, Forster2019, King2019, Byrd2020, New2022, Chen2020, Dubinkina2017, Hu2019, Jeong2021, Zeller2014, Wang2018, Vachida2019, Wang2020a, Li2019b | 30 |