296 |
Abiotrophia defectiva |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Aerococcaceae
|
2956 |
Absiella argi |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
2642 |
Absiella innocuum |
Moderate Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
1445 |
Absiella tortuosum |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
298 |
Acetanaerobacterium elongatum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2799 |
Acetatifactor muris |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2158 |
Acetitomaculum ruminis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2376 |
Acetivibrio cellulolyticus |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
558 |
Acetivibrio clariflavus |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2794 |
Acetivibrio ethanolgignens |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Ruminococcaceae
|
2382 |
Acetivibrio saccincola |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1498 |
Acetivibrio thermocellus |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
602 |
Acetoanaerobium sticklandii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1824 |
Acetobacter pasteurianus |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodospirillales |
Acetobacteraceae
|
2159 |
Acetobacterium woodii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
1562 |
Acetomicrobium hydrogeniformans |
Unlikely Coloniser |
Synergistetes | Synergistia | Synergistales |
Synergistaceae
|
299 |
Achromobacter denitrificans |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Alcaligenaceae
|
2245 |
Achromobacter insuavis |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Alcaligenaceae
|
2246 |
Achromobacter spanius |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Alcaligenaceae
|
300 |
Achromobacter xylosoxidans |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Alcaligenaceae
|
5 |
Acidaminococcus fermentans |
Widespread Coloniser |
Firmicutes | Negativicutes | Acidaminococcales |
Acidaminococcaceae
|
6 |
Acidaminococcus intestini |
Moderate Coloniser |
Firmicutes | Negativicutes | Acidaminococcales |
Acidaminococcaceae
|
1749 |
Acidaminococcus massiliensis |
Rare Coloniser |
Firmicutes | Negativicutes | Acidaminococcales |
Acidaminococcaceae
|
3060 |
Acidaminococcus provencensis |
Rare Coloniser |
Firmicutes | Negativicutes | Acidaminococcales |
Acidaminococcaceae
|
1750 |
Acidaminococcus timonensis |
Rare Coloniser |
Firmicutes | Negativicutes | Acidaminococcales |
Acidaminococcaceae
|
975 |
Acidipropionibacterium acidipropionici |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
979 |
Acidipropionibacterium jensenii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
2386 |
Acidisarcina polymorpha |
Rare Coloniser |
Acidobacteria | Acidobacteriia | Acidobacteriales |
Acidobacteriaceae
|
301 |
Acidovorax facilis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
7 |
Acidovorax sp. strain KKS102 |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
2247 |
Acidovorax temperans |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
1563 |
Acidovorax wautersii |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
302 |
Acinetobacter baumannii |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
1542 |
Acinetobacter bereziniae |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
303 |
Acinetobacter calcoaceticus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
1543 |
Acinetobacter guillouiae |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
304 |
Acinetobacter haemolyticus |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
2864 |
Acinetobacter idrijaensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
305 |
Acinetobacter johnsonii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
306 |
Acinetobacter junii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
307 |
Acinetobacter lwoffii |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
2953 |
Acinetobacter parvus |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Moraxellales |
Moraxellaceae
|
308 |
Acinetobacter pittii |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
309 |
Acinetobacter radioresistens |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
1751 |
Acinetobacter schindleri |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Moraxellales |
Moraxellaceae
|
310 |
Acinetobacter septicus |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
1825 |
Acinetobacter towneri |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Moraxellales |
Moraxellaceae
|
1544 |
Acinetobacter ursingii |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
1200 |
Acinetobacter variabilis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
2248 |
Actinobacillus capsulatus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
2970 |
Actinobacillus minor |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
311 |
Actinobacillus pleuropneumoniae |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
2354 |
Actinobacillus succinogenes |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
1826 |
Actinobacillus ureae |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
1827 |
Actinobaculum massiliense |
Minor Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1545 |
Actinomyces bouchesdurhonensis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
312 |
Actinomyces canis |
Non-coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1828 |
Actinomyces dentalis |
Non-coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
314 |
Actinomyces georgiae |
Non-coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
2855 |
Actinomyces gerencseriae |
Unlikely Coloniser |
Actinobacteria | Actinobacteria | Actinomycetales |
Actinomycetaceae
|
315 |
Actinomyces graevenitzii |
Minor Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1829 |
Actinomyces ihuae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1497 |
Actinomyces israelii |
Non-coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1830 |
Actinomyces johnsonii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1546 |
Actinomyces marseillensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
2840 |
Actinomyces massiliensis |
Rare Coloniser |
Actinobacteria | Actinobacteria | Actinomycetales |
Actinomycetaceae
|
1201 |
Actinomyces mediterranea |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1202 |
Actinomyces minihominis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
317 |
Actinomyces naeslundii |
Minor Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
319 |
Actinomyces oris |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
2387 |
Actinomyces pacaensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1203 |
Actinomyces polynesiensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1831 |
Actinomyces provencensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Acidothermaceae
|
1499 |
Actinomyces sp. ph3 |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
3011 |
Actinomyces timonensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
322 |
Actinomyces urogenitalis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
323 |
Actinomyces viscosus |
Minor Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
3023 |
Actinosynnema mirum |
Non-coloniser |
Actinobacteria | Actinomycetia | Pseudonocardiales |
Pseudonocardiaceae
|
1204 |
Actinotignum schaalii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
2388 |
Acutalibacter muris |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2726 |
Acutalibacter timonensis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Ruminococcaceae
|
2981 |
Adhaeribacter aquaticus |
Unlikely Coloniser |
Bacteroidetes | Cytophagia | Cytophagales |
Hymenobacteraceae
|
2824 |
Adlercreutzia caecimuris |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
8 |
Adlercreutzia equolifaciens |
Moderate Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
382 |
Adlercreutzia equolifaciens subsp. celatus |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
2238 |
Adlercreutzia hattorii |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
1737 |
Adlercreutzia mucosicola |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
2234 |
Adlercreutzia rubneri |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
324 |
Aeribacillus pallidus |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
2160 |
Aerococcus vaginalis |
Non-coloniser |
Firmicutes | Bacilli | Lactobacillales |
Aerococcaceae
|
325 |
Aerococcus viridans |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Aerococcaceae
|
326 |
Aeromicrobium massiliense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Nocardioidaceae
|
1832 |
Aeromicrobium tamlense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Nocardioidaceae
|
327 |
Aeromonas allosaccharophila |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
328 |
Aeromonas bestiarum |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
329 |
Aeromonas caviae |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
1205 |
Aeromonas dhakensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
1833 |
Aeromonas encheleia |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
330 |
Aeromonas enteropelogenes |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
1206 |
Aeromonas eucrenophila |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
331 |
Aeromonas hydrophila |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
1209 |
Aeromonas hydrophila subsp. hydrophila |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
332 |
Aeromonas jandaei |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
333 |
Aeromonas media |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
1834 |
Aeromonas popoffii |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
1835 |
Aeromonas salmonicida |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
1836 |
Aeromonas schubertii |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
1210 |
Aeromonas sobria |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
1837 |
Aeromonas taiwanensis |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
334 |
Aeromonas tecta |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
335 |
Aeromonas trota |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
336 |
Aeromonas veronii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Aeromonadaceae
|
2161 |
Aestuariimicrobium kwangyangense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
337 |
Afipia birgiae |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhizobiales |
Bradyrhizobiaceae
|
1564 |
Afipia broomeae |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Bradyrhizobiaceae
|
2249 |
Afipia lausannensis |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Bradyrhizobiaceae
|
3077 |
Africanella massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2830 |
Agathobacter ruminis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1211 |
Agathobaculum butyriciproducens |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
692 |
Agathobaculum desmolans |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
2250 |
Aggregatibacter actinomycetemcomitans |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
338 |
Aggregatibacter aphrophilus |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
1212 |
Aggregatibacter segnis |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
2607 |
Agrilactobacillus composti |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
339 |
Agrobacterium radiobacter |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Rhizobiaceae
|
2848 |
Agrobacterium rhizogenes |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhizobiales |
Rhizobiaceae
|
1838 |
Agrobacterium tumefaciens |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Rhizobiaceae
|
1839 |
Agrococcus casei |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
340 |
Agrococcus jejuensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
1500 |
Agrococcus jenensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
341 |
Agrococcus terreus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
2162 |
Akkermansia glycaniphila |
Rare Coloniser |
Verrucomicrobia | Verrucomicrobiae | Verrucomicrobiales |
Akkermansiaceae
|
11 |
Akkermansia muciniphila |
Widespread Coloniser |
Verrucomicrobia | Verrucomicrobiae | Verrucomicrobiales |
Akkermansiaceae
|
342 |
Alcaligenes faecalis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Alcaligenaceae
|
1213 |
Alcaligenes faecalis subsp. faecalis |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Alcaligenaceae
|
2251 |
Aliagarivorans marinus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Alteromonadales |
Alteromonadaceae
|
376 |
Aliarcobacter butzleri |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Arcobacteraceae
|
377 |
Aliarcobacter cryaerophilus |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Arcobacteraceae
|
1840 |
Aliarcobacter skirrowii |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Arcobacteriaceae
|
2392 |
Alicyclobacillus acidocaldarius |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Alicyclobacillaceae
|
2900 |
Aliiruegeria sabulilitoris |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Rhodobacteraceae
|
1215 |
Alistipes communis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
1216 |
Alistipes dispar |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
13 |
Alistipes finegoldii |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
1217 |
Alistipes ihumii |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
343 |
Alistipes indistinctus |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
1218 |
Alistipes inops |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
344 |
Alistipes marseilloanorexicus |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
1520 |
Alistipes massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
1753 |
Alistipes megaguti |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
3061 |
Alistipes montrealensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
15 |
Alistipes obesi |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
345 |
Alistipes onderdonkii |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
1219 |
Alistipes onderdonkii subsp. vulgaris |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
1752 |
Alistipes provencensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
16 |
Alistipes putredinis |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
346 |
Alistipes senegalensis |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
17 |
Alistipes shahii |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
347 |
Alistipes timonensis |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
1841 |
Alkalibacillus halophilus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1220 |
Alkalihalobacillus alcalophilus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1842 |
Alkalihalobacillus gibsonii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
402 |
Alkalihalobacillus halodurans |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1843 |
Alkalihalobacillus oshimensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2389 |
Alkaliphilus metalliredigens |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2945 |
Alkaliphilus oremlandii |
Non-coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2995 |
Alkaliphilus transvaalensis |
Non-coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1844 |
Alkanindiges illinoisensis |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Moraxellales |
Moraxellaceae
|
348 |
Allisonella histaminiformans |
Minor Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
3063 |
Allobaculum fili |
Rare Coloniser |
Firmicutes | Erysipelotrichales | Erysipelotrichia |
Erysipelotrichaceae
|
3062 |
Allobaculum mucilyticum |
Rare Coloniser |
Firmicutes | Erysipelotrichales | Erysipelotrichia |
Erysipelotrichaceae
|
2163 |
Alloprevotella rava |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
349 |
Alloprevotella tannerae |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
1566 |
Alloscardovia omnicolens |
Minor Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2385 |
Alteracholeplasma palmae |
Rare Coloniser |
Tenericutes | Mollicutes | Acholeplasmatales |
Acholeplasmataceae
|
3101 |
Alterileibacterium massiliense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales Family XIII. Incertae Sedis
|
350 |
Amaricoccus kaplicensis |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Rhodobacteraceae
|
1221 |
Amedibacillus dolichus |
Minor Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichales
|
1446 |
Amedibacterium intestinale |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
2390 |
Aminipila butyrica |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales incertae sedis |
Eubacteriales Family XIII. Incertae Sedis
|
2391 |
Aminipila terrae |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales incertae sedis |
Eubacteriales Family XIII. Incertae Sedis
|
2393 |
Aminomonas paucivorans |
Rare Coloniser |
Synergistetes | Synergistia | Synergistales |
Synergistaceae
|
2394 |
Ammonifex degensii |
Non-coloniser |
Firmicutes | Clostridia | Thermoanaerobacterales |
Thermoanaerobacteraceae
|
2809 |
Amycolatopsis alba |
Rare Coloniser |
Actinobacteria | Actinobacteria | Pseudonocardiales |
Pseudonocardiaceae
|
3025 |
Amycolatopsis mediterranei |
Rare Coloniser |
Actinobacteria | Actinomycetia | Pseudonocardiales |
Pseudonocardiaceae
|
2832 |
Amycolatopsis thailandensis |
Rare Coloniser |
Actinobacteria | Actinobacteria | Pseudonocardiales |
Pseudonocardiaceae
|
2833 |
Amycolatopsis vancoresmycina |
Unlikely Coloniser |
Actinobacteria | Actinobacteria | Pseudonocardiales |
Pseudonocardiaceae
|
351 |
Anaerobiospirillum succiniciproducens |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Succinivibrionaceae
|
352 |
Anaerobiospirillum thomasii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Succinivibrionaceae
|
1222 |
Anaerobutyricum hallii |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
1223 |
Anaerobutyricum soehngenii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
353 |
Anaerococcus hydrogenalis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
1485 |
Anaerococcus jeddahensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
2990 |
Anaerococcus lactolyticus |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
1551 |
Anaerococcus marasmi |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
2395 |
Anaerococcus mediterraneensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
1567 |
Anaerococcus murdochii |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
354 |
Anaerococcus obesiensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
355 |
Anaerococcus octavius |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
18 |
Anaerococcus prevotii |
Minor Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
1845 |
Anaerococcus provencensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
1224 |
Anaerococcus rubeinfantis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
356 |
Anaerococcus senegalensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
3012 |
Anaerococcus tetradius |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
357 |
Anaerococcus vaginalis |
Minor Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
544 |
Anaerocolumna aminovalerica |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2396 |
Anaerocolumna cellulosilytica |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2397 |
Anaerocolumna chitinilytica |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2398 |
Anaerocolumna sedimenticola |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2380 |
Anaerocolumna xylanovorans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
358 |
Anaerofilum pentosovorans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
359 |
Anaerofustis stercorihominis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
1156 |
Anaeroglobus geminatus |
Minor Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
1225 |
Anaeromassilibacillus senegalensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
360 |
Anaerorhabdus furcosa |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
1755 |
Anaerosalibacter bizertensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Tissierellaceae
|
1226 |
Anaerosalibacter massiliensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Tissierellaceae
|
1731 |
Anaerosphaera massiliensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
1846 |
Anaerospora hongkongensis |
Rare Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Sporomusaceae
|
361 |
Anaerostipes butyraticus |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
362 |
Anaerostipes caccae |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
363 |
Anaerostipes coli |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2 |
Anaerostipes hadrus |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2226 |
Anaerostipes hominis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1227 |
Anaerostipes rhamnosivorans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
364 |
Anaerostipes rhamnosus |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1228 |
Anaerotignum faecicola |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
576 |
Anaerotignum lactatifermentans |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2853 |
Anaerotignum neopropionicum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1522 |
Anaerotignum propionicum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
365 |
Anaerotruncus colihominis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1847 |
Anaerotruncus massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1756 |
Anaerotruncus rubiinfantis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1523 |
Anaerovorax odorimutans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales Family XIII. Incertae Sedis
|
366 |
Ancylobacter polymorphus |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Xanthobacteraceae
|
367 |
Aneurinibacillus aneurinilyticus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
368 |
Aneurinibacillus migulanus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2164 |
Angelakisella massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1848 |
Anoxybacillus flavithermus |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2399 |
Anoxybacillus gonensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
369 |
Anoxynatronum sibiricum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2400 |
Anseongella ginsenosidimutans |
Unlikely Coloniser |
Bacteroidetes | Sphingobacteriia | Sphingobacteriales |
Sphingobacteriaceae
|
1568 |
Aquabacterium citratiphilum |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
373 |
Aquabacterium commune |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
1569 |
Aquabacterium parvum |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
1849 |
Aquamicrobium lusatiense |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Phyllobacteriaceae
|
1570 |
Aquincola tertiaricarbonis |
Non-coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiales genera incertae sedis
|
1759 |
Arabia massiliensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
980 |
Arachnia propionica |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
374 |
Arcanobacterium haemolyticum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1850 |
Arthrobacter agilis |
Non-coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
379 |
Arthrobacter castelli |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
2401 |
Arthrobacter citreus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1851 |
Arthrobacter gandavensis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
2252 |
Arthrobacter globiformis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1852 |
Arthrobacter koreensis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1853 |
Arthrobacter luteolus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1854 |
Arthrobacter parietis |
Non-coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1855 |
Arthrobacter pigmenti |
Non-coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1571 |
Arthrobacter russicus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
575 |
Asaccharospora irregularis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2364 |
Asticcacaulis biprosthecium |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
2402 |
Asticcacaulis excentricus |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
684 |
Atlantibacter hermannii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
383 |
Atopobium minutum |
Minor Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
2917 |
Atopostipes suicloacalis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Carnobacteriaceae
|
386 |
Aureimonas altamirensis |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Aurantimonadaceae
|
1572 |
Aureimonas ureilytica |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Aurantimonadaceae
|
387 |
Averyella dalhousiensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2403 |
Azoarcus pumilus |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Rhodocyclales |
Rhodocyclaceae
|
2404 |
Azospirillum lipoferum |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodospirillales |
Azospirillaceae
|
3024 |
Azotobacter vinelandii |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
1760 |
Bacilliculturomica massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales incertae sedis |
Eubacteriales Family XIII. Incertae Sedis
|
388 |
Bacillus altitudinis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
389 |
Bacillus amyloliquefaciens |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1856 |
Bacillus andreraoultii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1158 |
Bacillus aneurinolyticus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2253 |
Bacillus anthracis |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
391 |
Bacillus atrophaeus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1447 |
Bacillus badius DSM 23T |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
392 |
Bacillus badius DSM 5610 |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1857 |
Bacillus baekryungensis |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
394 |
Bacillus benzoevorans |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1488 |
Bacillus caccae |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
395 |
Bacillus cereus |
Minor Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
396 |
Bacillus circulans |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
397 |
Bacillus clausii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
22 |
Bacillus cytotoxicus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1229 |
Bacillus dakarensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
398 |
Bacillus endophyticus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
399 |
Bacillus firmus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
401 |
Bacillus fordii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1501 |
Bacillus halotolerans |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
403 |
Bacillus idriensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
404 |
Bacillus infantis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
3090 |
Bacillus kwashiorkori |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
405 |
Bacillus licheniformis |
Minor Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1758 |
Bacillus marasmi |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
407 |
Bacillus massilioanorexius |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1230 |
Bacillus massiliogabonensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1858 |
Bacillus massilionigeriensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1547 |
Bacillus mediterraneensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
23 |
Bacillus methanolicus |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
410 |
Bacillus mojavensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
411 |
Bacillus mycoides |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1231 |
Bacillus niameyensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1859 |
Bacillus pakistanensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1232 |
Bacillus phocaeensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
415 |
Bacillus pseudofirmus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1861 |
Bacillus pseudomycoides |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
416 |
Bacillus pumilus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1233 |
Bacillus rubiinfantis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1234 |
Bacillus sinesaloumensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
420 |
Bacillus siralis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1573 |
Bacillus smithii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
421 |
Bacillus sonorensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
422 |
Bacillus subtilis |
Minor Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1862 |
Bacillus testis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
424 |
Bacillus thuringiensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
425 |
Bacillus timonensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1448 |
Bacillus tuaregi |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
426 |
Bacillus vallismortis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
414 |
Bacillus velezensis Variant polyfermenticus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2254 |
Bacillus wiedmannii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1574 |
Bacteroides acidifaciens |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1863 |
Bacteroides bouchesdurhonensis |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
24 |
Bacteroides caccae |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
25 |
Bacteroides caecimuris |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
26 |
Bacteroides cellulosilyticus |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
427 |
Bacteroides clarus |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1236 |
Bacteroides congonensis |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
2405 |
Bacteroides coprosuis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
2798 |
Bacteroides cutis |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
431 |
Bacteroides eggerthii |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1237 |
Bacteroides faecalis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1575 |
Bacteroides faecichinchillae |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
432 |
Bacteroides faecis |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
433 |
Bacteroides finegoldii |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
434 |
Bacteroides fluxus |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
30 |
Bacteroides fragilis |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
435 |
Bacteroides galacturonicus |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
2255 |
Bacteroides gallinarum |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
436 |
Bacteroides graminisolvens |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
34 |
Bacteroides helcogenes |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
2406 |
Bacteroides heparinolyticus |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1449 |
Bacteroides ihuae |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1450 |
Bacteroides ilei |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
437 |
Bacteroides intestinalis |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
2235 |
Bacteroides luhongzhouii |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
2898 |
Bacteroides luti |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1548 |
Bacteroides mediterraneensis |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
bacteroidaceae
|
1549 |
Bacteroides ndongoniae |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
bacteroidaceae
|
1238 |
Bacteroides neonati |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
439 |
Bacteroides nordii |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
440 |
Bacteroides oleiciplenus |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
36 |
Bacteroides ovatus |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
441 |
Bacteroides pectinophilus |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
2165 |
Bacteroides propionicifaciens |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
bacteroidaceae
|
443 |
Bacteroides pyogenes |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
2823 |
Bacteroides reticulotermitis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
444 |
Bacteroides salyersiae |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1452 |
Bacteroides sp. Strain D8 |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1576 |
Bacteroides stercorirosoris |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
445 |
Bacteroides stercoris |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
39 |
Bacteroides thetaiotaomicron |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
446 |
Bacteroides timonensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1451 |
Bacteroides togonis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
41 |
Bacteroides uniformis |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
44 |
Bacteroides xylanisolvens |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
2236 |
Bacteroides zhangwenhongi |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
2407 |
Bacteroides zoogleoformans |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1239 |
Bariatricus massiliensis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
48 |
Barnesiella intestinihominis |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Barnesiellaceae
|
49 |
Barnesiella viscericola |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Barnesiellaceae
|
1864 |
Bartonella vinsonii |
Non-coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Bartonellaceae
|
2166 |
Bavariicoccus seileri |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
3106 |
Bdellovibrio bacteriovorus |
Moderate Coloniser |
Bdellovibrionota | Bdellovibrionia | Bdellovibrionales |
Pseudobdellovibrionaceae
|
3089 |
Beduinella massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Beduinellaceae
|
1240 |
Beduini massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1796 |
Beduinibacterium massiliense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Christensenellaceae
|
1577 |
Belnapia soli |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodospirillales |
Acetobacteraceae
|
2408 |
Berryella intestinalis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
393 |
Bhargavaea beijingensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
1865 |
Bhargavaea cecembensis |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
50 |
Bifidobacterium adolescentis |
Widespread Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2167 |
Bifidobacterium aerophilum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
448 |
Bifidobacterium angulatum |
Moderate Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
3 |
Bifidobacterium animalis |
Moderate Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2256 |
Bifidobacterium animalis subsp. lactis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2409 |
Bifidobacterium asteroides |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2168 |
Bifidobacterium avesanii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2169 |
Bifidobacterium biavatii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
54 |
Bifidobacterium bifidum |
Widespread Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
449 |
Bifidobacterium boum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
58 |
Bifidobacterium breve |
Widespread Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2882 |
Bifidobacterium callitrichidarum |
Rare Coloniser |
Actinobacteria | Actinobacteria | Bifidobacteriales |
Bifidobacteriaceae
|
450 |
Bifidobacterium catenulatum |
Moderate Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
1241 |
Bifidobacterium catenulatum subsp. kashiwanohense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2410 |
Bifidobacterium choerinum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
451 |
Bifidobacterium coryneforme |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2893 |
Bifidobacterium cuniculi |
Rare Coloniser |
Actinobacteria | Actinobacteria | Bifidobacteriales |
Bifidobacteriaceae
|
4 |
Bifidobacterium dentium |
Moderate Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2411 |
Bifidobacterium eulemuris |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
1489 |
Bifidobacterium faecale |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
452 |
Bifidobacterium gallicum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2412 |
Bifidobacterium imperatoris |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
1866 |
Bifidobacterium indicum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2413 |
Bifidobacterium lemurum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
1242 |
Bifidobacterium longum subsp. infantis |
Moderate Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
1244 |
Bifidobacterium longum subsp. longum |
Widespread Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2362 |
Bifidobacterium longum subsp. suis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2814 |
Bifidobacterium merycicum |
Rare Coloniser |
Actinobacteria | Actinobacteria | Bifidobacteriales |
Bifidobacteriaceae
|
2822 |
Bifidobacterium minimum |
Rare Coloniser |
Actinobacteria | Actinobacteria | Bifidobacteriales |
Bifidobacteriaceae
|
453 |
Bifidobacterium mongoliense |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2836 |
Bifidobacterium moukalabense |
Rare Coloniser |
Actinobacteria | Actinobacteria | Bifidobacteriales |
Bifidobacteriaceae
|
2876 |
Bifidobacterium myosotis |
Rare Coloniser |
Actinobacteria | Actinobacteria | Bifidobacteriales |
Bifidobacteriaceae
|
454 |
Bifidobacterium pseudocatenulatum |
Widespread Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
455 |
Bifidobacterium pseudolongum |
Minor Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
1550 |
Bifidobacterium pseudolongum subsp. globosum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
1524 |
Bifidobacterium pullorum subsp. gallinarum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
1867 |
Bifidobacterium pullorum subsp. saeculare |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2170 |
Bifidobacterium ramosum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2849 |
Bifidobacterium reuteri |
Rare Coloniser |
Actinobacteria | Actinobacteria | Bifidobacteriales |
Bifidobacteriaceae
|
456 |
Bifidobacterium ruminantium |
Minor Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2414 |
Bifidobacterium saguini |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
457 |
Bifidobacterium scardovii |
Minor Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2902 |
Bifidobacterium stellenboschense |
Rare Coloniser |
Actinobacteria | Actinobacteria | Bifidobacteriales |
Bifidobacteriaceae
|
2415 |
Bifidobacterium subtile |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
458 |
Bifidobacterium thermacidophilum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
77 |
Bifidobacterium thermophilum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
459 |
Bifissio spartinae |
Rare Coloniser |
Bacteroidetes | None | None |
Bacteroidetes incertae sedis
|
78 |
Bilophila wadsworthia |
Widespread Coloniser |
Desulfobacterota | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
1765 |
Bittarella massiliensis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
460 |
Blastococcus massiliensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Geodermatophilales |
Geodermatophilaceae
|
461 |
Blastomonas natatoria |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
1490 |
Blautia brookingsii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2936 |
Blautia caecimuris |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
464 |
Blautia coccoides |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1246 |
Blautia faecicola |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
465 |
Blautia faecis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
466 |
Blautia glucerasea |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
79 |
Blautia hansenii |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1247 |
Blautia hominis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
467 |
Blautia hydrogenotrophica |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2244 |
Blautia intestinalis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2418 |
Blautia liquoris |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
468 |
Blautia luti |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1491 |
Blautia marasmi |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
462 |
Blautia massiliensis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
81 |
Blautia obeum |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1766 |
Blautia phocaeensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
469 |
Blautia producta |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1453 |
Blautia provencensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2979 |
Blautia pseudococcoides |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1195 |
Blautia schinkii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
470 |
Blautia stercoris |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
471 |
Blautia wexlerae |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1868 |
Bordetella bronchiseptica |
Non-coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Alcaligenaceae
|
472 |
Bordetella hinzii |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Alcaligenaceae
|
1869 |
Bordetella trematum |
Non-coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Alcaligenaceae
|
1578 |
Bosea massiliensis |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Boseaceae
|
2997 |
Brachybacterium conglomeratum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Dermabacteraceae
|
3026 |
Brachybacterium faecium |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Dermabacteraceae
|
1579 |
Brachybacterium ginsengisoli |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Dermabacteraceae
|
1492 |
Brachybacterium massiliense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Dermabacteraceae
|
2954 |
Brachybacterium muris |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Dermabacteraceae
|
473 |
Brachybacterium paraconglomeratum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Dermabacteraceae
|
2257 |
Brachymonas chironomi |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
474 |
Brachyspira aalborgi |
Rare Coloniser |
Spirochaetes | Spirochaetia | Brachyspirales |
Brachyspiraceae
|
2419 |
Brachyspira hyodysenteriae |
Rare Coloniser |
Spirochaetes | Spirochaetia | Brachyspirales |
Brachyspiraceae
|
475 |
Brachyspira pilosicoli |
Unlikely Coloniser |
Spirochaetes | Spirochaetia | Brachyspirales |
Brachyspiraceae
|
476 |
Bradyrhizobium denitrificans |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Bradyrhizobiaceae
|
477 |
Bradyrhizobium elkanii |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Bradyrhizobiaceae
|
2258 |
Bradyrhizobium ganzhouense |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Bradyrhizobiaceae
|
1580 |
Bradyrhizobium icense |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Bradyrhizobiaceae
|
478 |
Bradyrhizobium japonicum |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Bradyrhizobiaceae
|
1581 |
Bradyrhizobium neotropicale |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Bradyrhizobiaceae
|
1870 |
Brassicibacter mesophilus |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Thermohalobacteraceae
|
2171 |
Brenneria populi Li et al. 2015 |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Pectobacteriaceae
|
479 |
Brevibacillus agri |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
480 |
Brevibacillus borstelensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
481 |
Brevibacillus brevis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1160 |
Brevibacillus centrosporus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1871 |
Brevibacillus choshinensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1161 |
Brevibacillus formosus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1872 |
Brevibacillus laterosporus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
482 |
Brevibacillus massiliensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1873 |
Brevibacillus parabrevis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1248 |
Brevibacillus thermoruber |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2867 |
Brevibacterium aurantiacum |
Unlikely Coloniser |
Actinobacteria | Actinobacteria | Micrococcales |
Brevibacteriaceae
|
483 |
Brevibacterium casei |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
1874 |
Brevibacterium celere |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
484 |
Brevibacterium epidermidis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
3085 |
Brevibacterium ihuae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
486 |
Brevibacterium iodinum |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
487 |
Brevibacterium linens |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
1875 |
Brevibacterium luteolum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
2987 |
Brevibacterium mcbrellneri |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
1876 |
Brevibacterium otitidis |
Non-coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
1877 |
Brevibacterium paucivorans |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
489 |
Brevibacterium pityocampae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
488 |
Brevibacterium ravenspurgense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
1582 |
Brevibacterium samyangense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
2259 |
Brevibacterium sanguinis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
491 |
Brevibacterium senegalense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Brevibacteriaceae
|
1583 |
Brevundimonas aurantiaca |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
492 |
Brevundimonas bacteroides |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
1584 |
Brevundimonas bullata |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
493 |
Brevundimonas diminuta |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
2260 |
Brevundimonas intermedia |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
1525 |
Brevundimonas nasdae |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
495 |
Brevundimonas terrae |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
494 |
Brevundimonas vesicularis |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
496 |
Brochothrix thermosphacta |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Listeriaceae
|
1249 |
Brucella anthropi |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Brucellaceae
|
2261 |
Brucella cytisi |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Brucellaceae
|
1878 |
Brucella melitensis |
Non-coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Brucellaceae
|
1879 |
Brucella tritici |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Brucellaceae
|
2172 |
Buchnera aphidicola |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Erwiniaceae
|
497 |
Bulleidia extructa |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
2262 |
Burkholderia arboris |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
498 |
Burkholderia cepacia |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
2421 |
Burkholderia gladioli |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
2980 |
Burkholderia mallei |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
3049 |
Burkholderia multivorans |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
2988 |
Burkholderia pseudomallei |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
2365 |
Burkholderia pyrrocinia |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
3031 |
Burkholderia vietnamiensis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
1880 |
Buttiauxella agrestis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2971 |
Butyribacter intestini |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1250 |
Butyricicoccus faecihominis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2802 |
Butyricicoccus porcorum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
499 |
Butyricicoccus pullicaecorum |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1251 |
Butyricimonas faecalis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Odoribacteraceae
|
1252 |
Butyricimonas faecihominis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Odoribacteraceae
|
1253 |
Butyricimonas paravirosa |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Odoribacteraceae
|
1493 |
Butyricimonas phoceensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Odoribacteraceae
|
500 |
Butyricimonas synergistica |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Odoribacteraceae
|
91 |
Butyricimonas virosa |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Odoribacteraceae
|
501 |
Butyrivibrio crossotus |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
502 |
Butyrivibrio fibrisolvens |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2422 |
Butyrivibrio hungatei |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2423 |
Butyrivibrio proteoclasticus |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2878 |
Caballeronia novacaledonica |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
2835 |
Caecibacter massiliensis |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
423 |
Caldibacillus thermoamylovorans |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2424 |
Caldicellulosiruptor diazotrophicus |
Non-coloniser |
Firmicutes | Clostridia | Thermoanaerobacterales |
Thermoanaerobacterales Family III. Incertae Sedis
|
2263 |
Caldicoprobacter faecalis |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Caldicoprobacteraceae
|
2426 |
Caloranaerobacter azorensis |
Non-coloniser |
Firmicutes | Clostridia | Eubacteriales |
Thermohalobacteraceae
|
2173 |
Campylobacter avium |
Non-coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
104 |
Campylobacter coli |
Unlikely Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
503 |
Campylobacter concisus |
Minor Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
504 |
Campylobacter curvus |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
505 |
Campylobacter faecalis |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
1254 |
Campylobacter fetus subsp. fetus |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
507 |
Campylobacter gracilis |
Minor Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
105 |
Campylobacter hominis |
Minor Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
1256 |
Campylobacter hyointestinalis subsp. hyointestinalis |
Unlikely Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
1257 |
Campylobacter jejuni subsp. doylei |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
1258 |
Campylobacter jejuni subsp. jejuni |
Unlikely Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
1259 |
Campylobacter lanienae |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
1260 |
Campylobacter lari subsp. concheus |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
509 |
Campylobacter lari subsp. lari |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
1767 |
Campylobacter mucosalis |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
1261 |
Campylobacter peloridis |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
510 |
Campylobacter rectus |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
511 |
Campylobacter showae |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
1881 |
Campylobacter sputorum |
Non-coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
1768 |
Campylobacter troglodytis |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
512 |
Campylobacter upsaliensis |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
447 |
Campylobacter ureolyticus |
Minor Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
2174 |
Candidatus Babela massiliensis |
Unlikely Coloniser |
Candidatus Dependentiae | Candidatus Babeliae | Candidatus Babeliales |
Candidatus Babeliaceae
|
513 |
Candidatus Dorea massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
514 |
Candidatus Stoquefichus massiliensis |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
2432 |
Capnocytophaga canimorsus |
Unlikely Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
1883 |
Capnocytophaga gingivalis |
Non-coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
515 |
Capnocytophaga granulosa |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
2879 |
Capnocytophaga leadbetteri |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
516 |
Capnocytophaga ochracea |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
517 |
Capnocytophaga sputigena |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
2433 |
Capnocytophaga stomatis |
Unlikely Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
2434 |
Caproicibacter fermentans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1585 |
Cardiobacterium hominis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Cardiobacteriales |
Cardiobacteriaceae
|
3013 |
Cardiobacterium valvarum |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Cardiobacteriales |
Cardiobacteriaceae
|
1884 |
Carnobacterium divergens |
Non-coloniser |
Firmicutes | Bacilli | Lactobacillales |
Carnobacteriaceae
|
1586 |
Carnobacterium inhibens |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Carnobacteriaceae
|
1885 |
Carnobacterium maltaromaticum |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Carnobacteriaceae
|
1886 |
Carnobacterium mobile |
Non-coloniser |
Firmicutes | Bacilli | Lactobacillales |
Carnobacteriaceae
|
1769 |
Casaltella massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales incertae sedis |
Eubacteriales Family XIII. Incertae Sedis
|
1262 |
Catenibacillus scindens |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
519 |
Catenibacterium mitsuokai |
Moderate Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Coprobacillaceae
|
3035 |
Catenulispora acidiphila |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Catenulisporales |
Catenulisporaceae
|
2817 |
Catonella morbi |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2264 |
Caulobacter vibrioides |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
520 |
Cedecea davisae |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1746 |
Cedecea lapagei |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1747 |
Cedecea neteri |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2827 |
Cellulomonas carbonis |
Unlikely Coloniser |
Actinobacteria | Actinobacteria | Micrococcales |
Cellulomonadaceae
|
521 |
Cellulomonas composti |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Cellulomonadaceae
|
522 |
Cellulomonas denverensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Cellulomonadaceae
|
3044 |
Cellulomonas fimi |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Cellulomonadaceae
|
1887 |
Cellulomonas flavigena |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Cellulomonadaceae
|
1888 |
Cellulomonas hominis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Cellulomonadaceae
|
523 |
Cellulomonas massiliensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Cellulomonadaceae
|
524 |
Cellulomonas parahominis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Cellulomonadaceae
|
1889 |
Cellulomonas timonensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Cellulomonadaceae
|
525 |
Cellulosilyticum lentocellum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2946 |
Cellulosilyticum ruminicola |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
526 |
Cellulosimicrobium cellulans |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Promicromonosporaceae
|
2983 |
Centipeda periodontii |
Rare Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
1890 |
Cerasibacillus quisquiliarum |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
527 |
Cetobacterium somerae |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
2367 |
Chelatococcus asaccharovorans |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Chelatococcaceae
|
2435 |
Chitinophaga agri |
Unlikely Coloniser |
Bacteroidetes | Chitinophagia | Chitinophagales |
Chitinophagaceae
|
1891 |
Chlamydia trachomatis |
Non-coloniser |
Chlamydiae | Chlamydiia | Chlamydiales |
Chlamydiaceae
|
2937 |
Chloracidobacterium thermophilum |
Non-coloniser |
Acidobacteria | Blastocatellia | None |
None
|
518 |
Christensenella hongkongensis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Christensenellaceae
|
1263 |
Christensenella massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Christensenellaceae
|
528 |
Christensenella minuta |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Christensenellaceae
|
1264 |
Christensenella timonensis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Christensenellaceae
|
1892 |
Chromobacterium violaceum |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Chromobacteriaceae
|
1893 |
Chromohalobacter japonicus |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Oceanospirillales |
Halomonadaceae
|
2910 |
Chromohalobacter salexigens |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Oceanospirillales |
Halomonadaceae
|
2436 |
Chryseobacterium gallinarum |
Unlikely Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
1894 |
Chryseobacterium gleum |
Unlikely Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
529 |
Chryseobacterium hominis |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
1895 |
Chryseobacterium indologenes |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
1265 |
Chryseobacterium oranimense |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
2265 |
Chryseobacterium taklimakanense |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
2845 |
Chryseobacterium viscerum |
Non-coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
1587 |
Chryseomicrobium amylolyticum |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
530 |
Citrobacter amalonaticus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
531 |
Citrobacter braakii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1266 |
Citrobacter europaeus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
532 |
Citrobacter farmeri |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
108 |
Citrobacter freundii |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
533 |
Citrobacter gillenii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
534 |
Citrobacter intermedius |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
535 |
Citrobacter koseri |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
536 |
Citrobacter murliniae |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1267 |
Citrobacter pasteurii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2437 |
Citrobacter portucalensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2886 |
Citrobacter rodentium |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
537 |
Citrobacter sedlakii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
538 |
Citrobacter werkmanii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
539 |
Citrobacter youngae |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1152 |
Citroniella saccharovorans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptoniphilaceae
|
540 |
Cloacibacillus evryensis |
Minor Coloniser |
Synergistetes | Synergistia | Synergistales |
Synergistaceae
|
1588 |
Cloacibacillus porcorum |
Rare Coloniser |
Synergistetes | Synergistia | Synergistales |
Synergistaceae
|
541 |
Cloacibacterium normanense |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
110 |
Clostridioides difficile |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
1454 |
Clostridioides mangenotii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
542 |
Clostridium acetobutylicum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1268 |
Clostridium amazonense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1455 |
Clostridium amazonitimonense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2932 |
Clostridium aminobutyricum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2923 |
Clostridium aminophilum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1896 |
Clostridium amylolyticum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
545 |
Clostridium anorexicamassiliense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2438 |
Clostridium argentinense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1163 |
Clostridium aurantibutyricum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2439 |
Clostridium autoethanogenum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
547 |
Clostridium baratii |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
549 |
Clostridium beijerinckii |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1589 |
Clostridium boliviensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2440 |
Clostridium bornimense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
112 |
Clostridium botulinum Gp I |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1456 |
Clostridium botulinum Gp II |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1457 |
Clostridium botulinum Gp III |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1458 |
Clostridium botulinum Gp IV |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
688 |
Clostridium budayi |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
551 |
Clostridium butyricum |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
552 |
Clostridium cadaveris |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1552 |
Clostridium cagae |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1897 |
Clostridium carboxidivorans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1164 |
Clostridium carnis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
553 |
Clostridium celatum |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1732 |
Clostridium cellulosi |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2441 |
Clostridium cellulovorans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
555 |
Clostridium chartatabidum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
556 |
Clostridium chauvoei |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
560 |
Clostridium cochlearium |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
561 |
Clostridium cocleatum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2973 |
Clostridium colicanis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1526 |
Clostridium colinum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2360 |
Clostridium combesii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
3075 |
Clostridium culturomicium |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1269 |
Clostridium dakarense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1898 |
Clostridium diolis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
563 |
Clostridium disporicum |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2442 |
Clostridium drakei |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2443 |
Clostridium estertheticum |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
564 |
Clostridium fallax |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
565 |
Clostridium felsineum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1541 |
Clostridium fessum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2445 |
Clostridium gasigenes |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1165 |
Clostridium haemolyticum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
570 |
Clostridium herbivorans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
572 |
Clostridium hylemonae |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1270 |
Clostridium ihumii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
574 |
Clostridium innocuum |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1167 |
Clostridium intestinale |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2446 |
Clostridium isatidis |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1271 |
Clostridium jeddahense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
3076 |
Clostridium jeddahitimonense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2447 |
Clostridium kluyveri |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
578 |
Clostridium leptum |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2176 |
Clostridium magnum |
Rare Coloniser |
Firmicutes | Clostridia | Clostridiales |
Clostridiaceae
|
581 |
Clostridium malenominatum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2448 |
Clostridium manihotivorum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1900 |
Clostridium massiliamazoniense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1272 |
Clostridium massiliodielmoense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1901 |
Clostridium mediterraneense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1273 |
Clostridium merdae |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2377 |
Clostridium metallolevans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
582 |
Clostridium methoxybenzovorans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
583 |
Clostridium methylpentosum |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1274 |
Clostridium minihomine |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
694 |
Clostridium moniliforme |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
584 |
Clostridium neonatale |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1902 |
Clostridium niameyense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1553 |
Clostridium nigeriense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
696 |
Clostridium nitritogenes |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1487 |
Clostridium novyi A |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1169 |
Clostridium oceanicum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
586 |
Clostridium paraputrificum |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2449 |
Clostridium pasteurianum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
276 |
Clostridium perfringens |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
287 |
Clostridium phoceensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1590 |
Clostridium polyendosporum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1276 |
Clostridium polynesiense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1527 |
Clostridium polysaccharolyticum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
587 |
Clostridium populeti |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1277 |
Clostridium punense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
588 |
Clostridium putrefaciens |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1554 |
Clostridium rectalis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2950 |
Clostridium roseum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2450 |
Clostridium saccharobutylicum |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
592 |
Clostridium saccharoperbutylacetonicum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
593 |
Clostridium sardiniense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
594 |
Clostridium sartagoforme |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1278 |
Clostridium saudiense |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1172 |
Clostridium scatologenes |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1904 |
Clostridium schirmacherense |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
595 |
Clostridium scindens |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
596 |
Clostridium senegalense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
278 |
Clostridium septicum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
600 |
Clostridium sporogenes |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
601 |
Clostridium sporosphaeroides |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
603 |
Clostridium subterminale |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1528 |
Clostridium sulfidigenes |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
604 |
Clostridium symbiosum |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2451 |
Clostridium taeniosporum |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
605 |
Clostridium tertium |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
279 |
Clostridium tetani |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2452 |
Clostridium thermarum |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2861 |
Clostridium thermobutyricum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1905 |
Clostridium thiosulfatireducens |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
3099 |
Clostridium transplantifaecale |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
606 |
Clostridium tyrobutyricum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
607 |
Clostridium vincentii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
608 |
Clostridium viride |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1486 |
Colibacter massiliensis |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
1820 |
Colidextribacter massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales incertae sedis
|
120 |
Collinsella aerofaciens |
Widespread Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
1279 |
Collinsella bouchesdurhonensis |
Minor Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
1906 |
Collinsella ihumii |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
609 |
Collinsella intestinalis |
Moderate Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
1280 |
Collinsella massiliensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
1793 |
Collinsella phocaeensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
1281 |
Collinsella provencensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
610 |
Collinsella stercoris |
Minor Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
611 |
Collinsella tanakaei |
Minor Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
2847 |
Collinsella vaginalis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
2177 |
Comamonas aquatica |
Non-coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
1591 |
Comamonas denitrificans |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
612 |
Comamonas kerstersii |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
2453 |
Comamonas koreensis |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
1282 |
Comamonas terrigena |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
613 |
Comamonas testosteroni |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
2268 |
Comamonas thiooxydans |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
777 |
Companilactobacillus alimentarius |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2269 |
Companilactobacillus farciminis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1592 |
Companilactobacillus mindensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2608 |
Companilactobacillus versmoldensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2368 |
Conexibacter woesei |
Rare Coloniser |
Actinobacteria | Thermoleophilia | Solirubrobacterales |
Conexibacteraceae
|
1283 |
Congobacterium massiliense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales Family XIII. Incertae Sedis
|
614 |
Coprobacillus cateniformis |
Moderate Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Coprobacillaceae
|
121 |
Coprobacter fastidiosus |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
1284 |
Coprobacter secundus |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacillales |
Barnesiellaceae
|
2454 |
Coprobacter secundus subsp. similis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacillales |
Barnesiellaceae
|
122 |
Coprococcus catus |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
615 |
Coprococcus comes |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
123 |
Coprococcus eutactus |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
3074 |
Coprococcus phoceensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2938 |
Coraliomargarita akajimensis |
Non-coloniser |
Verrucomicrobia | Opitutae | Puniceicoccales |
Puniceicoccaceae
|
2455 |
Coriobacterium glomerans |
Unlikely Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
1770 |
Corynebacterium accolens |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
616 |
Corynebacterium afermentans |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
617 |
Corynebacterium ammoniagenes |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
618 |
Corynebacterium amycolatum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
619 |
Corynebacterium appendicis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2888 |
Corynebacterium argentoratense |
Rare Coloniser |
Actinobacteria | Actinobacteria | Corynebacteriales |
Corynebacteriaceae
|
620 |
Corynebacterium aurimucosum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1459 |
Corynebacterium bouchesdurhonense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2178 |
Corynebacterium bovis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2456 |
Corynebacterium callunae |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2862 |
Corynebacterium casei |
Rare Coloniser |
Actinobacteria | Actinobacteria | Corynebacteriales |
Corynebacteriaceae
|
621 |
Corynebacterium coyleae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2179 |
Corynebacterium cystitidis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1907 |
Corynebacterium diphtheriae |
Non-coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1908 |
Corynebacterium doosanense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
622 |
Corynebacterium durum |
Minor Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1909 |
Corynebacterium efficiens |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2180 |
Corynebacterium falsenii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1771 |
Corynebacterium flavescens |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
623 |
Corynebacterium freneyi |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
3036 |
Corynebacterium genitalium |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
624 |
Corynebacterium glaucum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
625 |
Corynebacterium glucuronolyticum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
3050 |
Corynebacterium glutamicum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1285 |
Corynebacterium ihumii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1286 |
Corynebacterium jeddahense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2924 |
Corynebacterium jeikeium |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
626 |
Corynebacterium kroppenstedtii |
Minor Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1910 |
Corynebacterium lipophiloflavum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2228 |
Corynebacterium lujinxingii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2457 |
Corynebacterium matruchotii |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
627 |
Corynebacterium minutissimum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
628 |
Corynebacterium mucifaciens |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
3098 |
Corynebacterium neomassiliense |
Rare Coloniser |
Actinobacteria | Actinomycetes | Mycobacteriales |
Corynebacteriaceae
|
1911 |
Corynebacterium otitidis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1754 |
Corynebacterium pacaense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
629 |
Corynebacterium propinquum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1494 |
Corynebacterium provencense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
630 |
Corynebacterium pseudodiphtheriticum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2270 |
Corynebacterium pseudogenitalium |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1912 |
Corynebacterium pyruviciproducens |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1913 |
Corynebacterium riegelii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
631 |
Corynebacterium sanguinis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
632 |
Corynebacterium simulans |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2951 |
Corynebacterium singulare |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1287 |
Corynebacterium stationis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
633 |
Corynebacterium striatum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1914 |
Corynebacterium suicordis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
634 |
Corynebacterium sundsvallense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
635 |
Corynebacterium tuberculostearicum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
636 |
Corynebacterium ulcerans |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
1915 |
Corynebacterium urealyticum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
637 |
Corynebacterium ureicelerivorans |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2818 |
Corynebacterium urinapleomorphum |
Rare Coloniser |
Actinobacteria | Actinobacteria | Corynebacteriales |
Corynebacteriaceae
|
1772 |
Corynebacterium variabile |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2227 |
Corynebacterium wankanglinii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
638 |
Corynebacterium xerosis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Corynebacteriaceae
|
2458 |
Crassaminicella thermophila |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2810 |
Criibacterium bergeronii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
2459 |
Cronobacter condimenti |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2940 |
Cronobacter muytjensii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
639 |
Cronobacter sakazakii |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2974 |
Cronobacter turicensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2460 |
Cruoricaptor ignavus |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
640 |
Cryptobacterium curtum |
Minor Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
1773 |
Culturomica massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Odoribacteraceae
|
641 |
Cupriavidus metallidurans |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
642 |
Curtobacterium flaccumfaciens |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
291 |
Cutibacterium acnes |
Moderate Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
2271 |
Cutibacterium acnes subsp. defendens |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
976 |
Cutibacterium avidum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
978 |
Cutibacterium granulosum |
Minor Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
1594 |
Cytophaga hutchinsonii |
Rare Coloniser |
Bacteroidetes | Cytophagia | Cytophagales |
Cytophagaceae
|
1916 |
Dakarella massiliensis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
3066 |
Dakotella fusiforme |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
2461 |
Dehalobacter restrictus |
Non-coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptococcaceae
|
2462 |
Dehalobacterium formicoaceticum |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptococcaceae
|
2463 |
Dehalococcoides mccartyi |
Unlikely Coloniser |
Chloroflexi | Dehalococcoidia | Dehalococcoidales |
Dehalococcoidaceae
|
643 |
Deinococcus aquaticus |
Unlikely Coloniser |
Deinococcus-Thermus | Deinococci | Deinococcales |
Deinococcaceae
|
1595 |
Deinococcus caeni |
Unlikely Coloniser |
Deinococcus-Thermus | Deinococci | Deinococcales |
Deinococcaceae
|
2181 |
Deinococcus geothermalis |
Non-coloniser |
Deinococcus-Thermus | Deinococci | Deinococcales |
Deinococcaceae
|
2464 |
Deinococcus proteolyticus |
Unlikely Coloniser |
Deinococcus-Thermus | Deinococci | Deinococcales |
Deinococcaceae
|
1596 |
Deinococcus reticulitermitis |
Unlikely Coloniser |
Deinococcus-Thermus | Deinococci | Deinococcales |
Deinococcaceae
|
1597 |
Deinococcus wulumuqiensis |
Unlikely Coloniser |
Deinococcus-Thermus | Deinococci | Deinococcales |
Deinococcaceae
|
644 |
Delftia acidovorans |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
2272 |
Delftia lacustris |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
1774 |
Delftia tsuruhatensis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
1512 |
Dellaglioa algida |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1739 |
Denitrobacterium detoxificans |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
645 |
Dermabacter hominis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Dermabacteraceae
|
1917 |
Dermacoccus barathri |
Non-coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Dermacoccaceae
|
646 |
Dermacoccus nishinomiyaensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Dermacoccaceae
|
1598 |
Desemzia incerta |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Carnobacteriaceae
|
1288 |
Desnuesiella massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2465 |
Desulfitobacterium dichloroeliminans |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptococcaceae
|
1289 |
Desulfitobacterium hafniense |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptococcaceae
|
2805 |
Desulfococcus multivorans |
Rare Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfobacterales |
Desulfobacteraceae
|
2466 |
Desulfocurvibacter africanus |
Unlikely Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2467 |
Desulfofarcimen acetoxidans |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptococcaceae
|
2182 |
Desulfomicrobium baculatum |
Unlikely Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2468 |
Desulfomicrobium orale |
Unlikely Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2470 |
Desulforamulus reducens |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptococcaceae
|
2427 |
Desulforudis audaxviator |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptococcaceae
|
2966 |
Desulfoscipio gibsoniae |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptococcaceae
|
2469 |
Desulfosporosinus youngiae |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptococcaceae
|
2471 |
Desulfotomaculum ruminis |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptococcaceae
|
648 |
Desulfovibrio desulfuricans |
Minor Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2359 |
Desulfovibrio diazotrophicus |
Rare Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
649 |
Desulfovibrio fairfieldensis |
Minor Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2931 |
Desulfovibrio intestinalis |
Rare Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
1599 |
Desulfovibrio legallii |
Rare Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2941 |
Desulfovibrio longreachensis |
Rare Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
650 |
Desulfovibrio piger |
Moderate Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2428 |
Desulfovibrio trichonymphae |
Non-coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
1918 |
Desulfovibrio vulgaris |
Rare Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2934 |
Desulfurispirillum indicum |
Unlikely Coloniser |
Chrysiogenetes | Chrysiogenetes | Chrysiogenales |
Chrysiogenaceae
|
2474 |
Desulfurobacterium thermolithotrophum |
Non-coloniser |
Aquificae | Aquificae | Desulfurobacteriales |
Desulfurobacteriaceae
|
1600 |
Devosia chinhatensis |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Devosiaceae
|
1601 |
Devosia limi |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Devosiaceae
|
1602 |
Devosia riboflavina |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Devosiaceae
|
1290 |
Dialister hominis |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
127 |
Dialister invisus |
Moderate Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
2475 |
Dialister massiliensis |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
2985 |
Dialister micraerophilus |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
651 |
Dialister pneumosintes |
Minor Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
2935 |
Dialister propionicifaciens |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
652 |
Dialister succinatiphilus |
Minor Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
653 |
Dielma fastidiosa |
Minor Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
2273 |
Dietzia cercidiphylli |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Dietziaceae
|
654 |
Dietzia cinnamea |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Dietziaceae
|
2274 |
Dietzia kunjamensis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Dietziaceae
|
655 |
Dietzia maris |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Dietziaceae
|
656 |
Dietzia natronolimnaea |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Dietziaceae
|
2476 |
Dolosigranulum pigrum |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Carnobacteriaceae
|
2696 |
Dorea faecis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
128 |
Dorea formicigenerans |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2834 |
Dorea hylemonae |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
129 |
Dorea longicatena |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1291 |
Dorea phocaeensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2674 |
Dorea scindens |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1292 |
Drancourtella massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Clostridiales |
Ruminococcaceae
|
2183 |
Dubosiella newyorkensis |
Rare Coloniser |
Firmicutes | Epsilonproteobacteria | Erysipelotrichales |
Erysipelotrichaceae
|
2477 |
Duncaniella dubosii |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Muribaculaceae
|
2816 |
Duncaniella muris |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Muribaculaceae
|
1821 |
Duodenibacillus massiliensis |
Minor Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
657 |
Dyadobacter beijingensis |
Unlikely Coloniser |
Bacteroidetes | Cytophagia | Cytophagales |
Cytophagaceae
|
658 |
Dyadobacter fermentans |
Unlikely Coloniser |
Bacteroidetes | Cytophagia | Cytophagales |
Cytophagaceae
|
2275 |
Dysgonomonas capnocytophagoides |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Dysgonomonadaceae
|
659 |
Dysgonomonas gadei |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Dysgonomonadaceae
|
1293 |
Dysgonomonas massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Dysgonomonadaceae
|
1603 |
Dysgonomonas mossii |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Dysgonomonadaceae
|
1294 |
Dysosmobacter welbionis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
660 |
Edwardsiella tarda |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2478 |
Eggerthella guodeyinii |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
130 |
Eggerthella lenta |
Widespread Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
1604 |
Eggerthella sinensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
1295 |
Eggerthella timonensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
661 |
Eggerthia catenaformis |
Minor Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Coprobacillaceae
|
662 |
Eikenella corrodens |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
1296 |
Eisenbergiella massiliensis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1297 |
Eisenbergiella tayi |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1298 |
Elizabethkingia meningoseptica |
Unlikely Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
1919 |
Elizabethkingia miricola |
Non-coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
1299 |
Ellagibacter isourolithinifaciens |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
2184 |
Elusimicrobium minutum |
Unlikely Coloniser |
Elusimicrobia | Elusimicrobia | Elusimicrobiales |
Elusimicrobiaceae
|
1495 |
Emergencia timonensis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales Family XIII. Incertae Sedis
|
1920 |
Empedobacter brevis |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
1300 |
Empedobacter falsenii |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
1605 |
Enhydrobacter aerosaccus |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Hyphomicrobiales incertae sedis
|
663 |
Enorma massiliensis |
Minor Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
1790 |
Enorma phocaeensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
1301 |
Enorma timonensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
1606 |
Ensifer adhaerens |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Rhizobiaceae
|
665 |
Enterobacter asburiae |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
666 |
Enterobacter cancerogenus |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
667 |
Enterobacter cloacae |
Moderate Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2276 |
Enterobacter cloacae subsp. dissolvens |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2791 |
Enterobacter himalayensis |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
668 |
Enterobacter hormaechei subsp. hormaechei |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1302 |
Enterobacter hormaechei subsp. steigerwaltii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1607 |
Enterobacter hormaechei subsp. xiangfangensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1775 |
Enterobacter kobei |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
669 |
Enterobacter ludwigii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
670 |
Enterobacter massiliensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2897 |
Enterobacter mori |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1303 |
Enterobacter roggenkampii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1743 |
Enterobacter soli |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1304 |
Enterobacter timonensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
543 |
Enterocloster aldenensis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
546 |
Enterocloster asparagiformis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
111 |
Enterocloster bolteae |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
557 |
Enterocloster citroniae |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
559 |
Enterocloster clostridioformis |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
577 |
Enterocloster lavalensis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
671 |
Enterococcus asini |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
672 |
Enterococcus avium |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
3097 |
Enterococcus burkinafasonensis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
673 |
Enterococcus caccae |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1921 |
Enterococcus canintestini |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1922 |
Enterococcus canis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
674 |
Enterococcus casseliflavus |
Moderate Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
675 |
Enterococcus cecorum |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
2629 |
Enterococcus columbae |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1776 |
Enterococcus devriesei |
Moderate Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1777 |
Enterococcus diestrammenae |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
676 |
Enterococcus dispar |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
677 |
Enterococcus durans |
Moderate Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1923 |
Enterococcus eurekensis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
133 |
Enterococcus faecalis |
Widespread Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
134 |
Enterococcus faecium |
Widespread Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
678 |
Enterococcus gallinarum |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1924 |
Enterococcus gilvus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
2631 |
Enterococcus haemoperoxidus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1925 |
Enterococcus hermanniensis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
137 |
Enterococcus hirae |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1926 |
Enterococcus italicus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
2185 |
Enterococcus lactis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1778 |
Enterococcus malodoratus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1927 |
Enterococcus massiliensis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1779 |
Enterococcus mediterraneensis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
2630 |
Enterococcus moraviensis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1173 |
Enterococcus mundtii |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
2277 |
Enterococcus pallens |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
679 |
Enterococcus phoeniculicola |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
680 |
Enterococcus pseudoavium |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1780 |
Enterococcus raffinosus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
681 |
Enterococcus saccharolyticus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
2479 |
Enterococcus saigonensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1608 |
Enterococcus sulfureus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1781 |
Enterococcus thailandicus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
3073 |
Enterococcus timonensis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1928 |
Enterococcus villorum |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1311 |
Enteroscipio rubneri |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
2278 |
Enterovibrio nigricans |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
2480 |
Ereboglobus luteus |
Unlikely Coloniser |
Verrucomicrobia | Opitutae | Opitutales |
Opitutaceae
|
1741 |
Erwinia billingiae |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Erwiniaceae
|
3021 |
Erwinia tasmaniensis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Erwiniaceae
|
2186 |
Erwinia teleogrylli |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
589 |
Erysipelatoclostridium ramosum |
Widespread Coloniser |
Firmicutes | Erysipelotrichia | Eubacteriales |
Erysipelotrichaceae
|
2697 |
Erysipelatoclostridium saccharogumia |
Minor Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
2721 |
Erysipelatoclostridium spiroforme |
Minor Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
2187 |
Erysipelothrix larvae |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
682 |
Escherichia albertii |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
141 |
Escherichia coli |
Widespread Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2741 |
Escherichia dysenteriae |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
683 |
Escherichia fergusonii |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2481 |
Escherichia marmotae |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2237 |
Escherichia ruysiae |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
154 |
Ethanoligenens harbinense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
685 |
Eubacterium barkeri |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
686 |
Eubacterium biforme |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
687 |
Eubacterium brachy |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
689 |
Eubacterium callanderi |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
690 |
Eubacterium cellulosolvens |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
1609 |
Eubacterium coprostanoligenes |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
693 |
Eubacterium dolichum |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
1610 |
Eubacterium infirmum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
156 |
Eubacterium limosum |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
1312 |
Eubacterium maltosivorans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
695 |
Eubacterium multiforme |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
1611 |
Eubacterium nodatum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales incertae sedis |
Eubacteriales Family XIII. Incertae Sedis
|
1530 |
Eubacterium oxidoreducens |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
2808 |
Eubacterium plexicaudatum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
2188 |
Eubacterium pyruvativorans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
1177 |
Eubacterium ramulus |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
157 |
Eubacterium rectale |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
697 |
Eubacterium ruminantium |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
698 |
Eubacterium saphenum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
159 |
Eubacterium siraeum |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
699 |
Eubacterium sulci |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
700 |
Eubacterium tenue |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
2837 |
Eubacterium uniforme |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
702 |
Eubacterium ventriosum |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
1612 |
Eubacterium xylanophilum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
1929 |
Eubacterium yurii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
1313 |
Ewingella americana |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
703 |
Exiguobacterium aurantiacum |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Family XI Incertae Sedis
|
1613 |
Exiguobacterium marinum |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Family XI Incertae Sedis
|
2279 |
Exiguobacterium mexicanum |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Family XI Incertae Sedis
|
1614 |
Exiguobacterium undae |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Family XI Incertae Sedis
|
428 |
Ezakiella coagulans |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
2482 |
Ezakiella massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1314 |
Ezakiella peruensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Tissierellia incertae sedis
|
1930 |
Facklamia hominis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Aerococcaceae
|
2280 |
Facklamia languida |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Aerococcaceae
|
1461 |
Faecalibacillus faecis |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
1460 |
Faecalibacillus intestinalis |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
169 |
Faecalibacterium prausnitzii |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2483 |
Faecalibaculum rodentium |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
1174 |
Faecalicatena contorta |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2633 |
Faecalicatena faecis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1931 |
Faecalicatena fissicatena |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2650 |
Faecalicatena glycyrrhizinilyticum |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2634 |
Faecalicatena gnavus |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2635 |
Faecalicatena lactaris |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1171 |
Faecalicatena orotica |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2636 |
Faecalicatena torques |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1094 |
Faecalicoccus pleomorphus |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1317 |
Faecalimonas umbilicata |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
176 |
Faecalitalea cylindroides |
Widespread Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
1615 |
Fannyhessea vaginae |
Minor Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1932 |
Fastidiosipila sanguinis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2846 |
Fenollaria massiliensis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
None
|
1933 |
Fenollaria timonensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales incertae sedis
|
177 |
Fermentimonas caenicola |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
2281 |
Ferrimonas balearica |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Alteromonadales |
Ferrimonadaceae
|
2484 |
Fibrobacter succinogenes |
Unlikely Coloniser |
Fibrobacteres | Fibrobacteria | Fibrobacterales |
Fibrobacteraceae
|
390 |
Fictibacillus arsenicus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
705 |
Filifactor alocis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
706 |
Filifactor villosus |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
707 |
Finegoldia magna |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptoniphilaceae
|
1934 |
Flaviflexus massiliensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
708 |
Flavobacterium banpakuense |
Unlikely Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
2189 |
Flavobacterium caeni |
Non-coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
709 |
Flavobacterium cheniae |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
2282 |
Flavobacterium daejeonense |
Unlikely Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
710 |
Flavobacterium lindanitolerans |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
711 |
Flavobacterium oncorhynchi |
Unlikely Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
712 |
Flavobacterium sakaeratica |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
178 |
Flavonifractor plautii |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
713 |
Flexispira rappini |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
2352 |
Flintibacter butyricus |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales incertae sedis
|
1318 |
Fournierella massiliensis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1935 |
Francisella tularensis |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Thiotrichales |
Francisellaceae
|
2190 |
Franconibacter pulveris |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1936 |
Fredinandcohnia humi |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
3014 |
Fretibacterium fastidiosum |
Rare Coloniser |
Synergistetes | Synergistia | Synergistales |
Synergistaceae
|
2609 |
Fructilactobacillus florum |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2610 |
Fructilactobacillus fructivorans |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1616 |
Fructilactobacillus sanfranciscensis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2925 |
Fucophilus fucoidanolyticus |
Rare Coloniser |
Verrucomicrobia | Verrucomicrobiae | Verrucomicrobiales |
Verrucomicrobiaceae
|
2191 |
Fundidesulfovibrio putealis |
Rare Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2611 |
Furfurilactobacillus rossiae |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
179 |
Fusicatenibacter saccharivorans |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1937 |
Fusobacterium canifelinum |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
714 |
Fusobacterium gonidiaformans |
Minor Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
1938 |
Fusobacterium massiliense |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
590 |
Fusobacterium mortiferum |
Moderate Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
716 |
Fusobacterium naviforme |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
717 |
Fusobacterium necrogenes |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
718 |
Fusobacterium necrophorum |
Minor Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
1939 |
Fusobacterium necrophorum subsp. funduliforme |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
719 |
Fusobacterium nucleatum |
Minor Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
1617 |
Fusobacterium nucleatum subsp. animalis |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
1618 |
Fusobacterium nucleatum subsp. nucleatum |
Minor Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
1619 |
Fusobacterium nucleatum subsp. polymorphum |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
1620 |
Fusobacterium nucleatum subsp. vincentii |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
2939 |
Fusobacterium perfoetens |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
720 |
Fusobacterium periodonticum |
Minor Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
2485 |
Fusobacterium pseudoperiodonticum |
Unlikely Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
721 |
Fusobacterium russii |
Minor Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
1621 |
Fusobacterium ulcerans |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
722 |
Fusobacterium varium |
Moderate Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Fusobacteriaceae
|
1474 |
Gabonia massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
1782 |
Gabonibacter massiliensis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
1462 |
Gabonibacter timonensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
2283 |
Gallibacterium anatis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
2486 |
Gardnerella leopoldii |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
180 |
Gardnerella vaginalis |
Minor Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
1622 |
Gemella asaccharolytica |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales incertae sedis |
Bacillales Family XI. Incertae Sedis
|
723 |
Gemella haemolysans |
Minor Coloniser |
Firmicutes | Bacilli | Caryophanales |
Family XI Incertae Sedis
|
724 |
Gemella morbillorum |
Minor Coloniser |
Firmicutes | Bacilli | Caryophanales |
Family XI Incertae Sedis
|
725 |
Gemella sanguinis |
Minor Coloniser |
Firmicutes | Bacilli | Caryophanales |
Family XI Incertae Sedis
|
2487 |
Gemmatimonas groenlandica |
Non-coloniser |
Gemmatimonadetes | Gemmatimonadetes | Gemmatimonadales |
Gemmatimonadaceae
|
726 |
Gemmiger formicilis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales Family XIII. Incertae Sedis
|
2647 |
Gemmiger variabile |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Ruminococcaceae
|
727 |
Geobacillus stearothermophilus |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
728 |
Geobacillus vulcani |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
3051 |
Geodermatophilus obscurus |
Non-coloniser |
Actinobacteria | Actinomycetia | Geodermatophilales |
Geodermatophilaceae
|
729 |
Georgenia muralis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Bogoriellaceae
|
2284 |
Georgenia satyanarayanai |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Bogoriellaceae
|
2488 |
Geosporobacter ferrireducens |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1940 |
Gleimia europaea |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1941 |
Globicatella sulfidifaciens |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Aerococcaceae
|
2984 |
Glutamicibacter arilaitensis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1623 |
Glutamicibacter protophormiae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1783 |
Gorbachella massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
3045 |
Gordonia alkanivorans |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Gordoniaceae
|
730 |
Gordonia rubripertincta |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Gordoniaceae
|
731 |
Gordonia terrae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Gordoniaceae
|
1761 |
Gordonibacter massiliensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
182 |
Gordonibacter pamelaeae |
Moderate Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
1319 |
Gordonibacter urolithinfaciens |
Minor Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
1464 |
Gorillibacterium timonense |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2489 |
Gottschalkia acidurici |
Unlikely Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Gottschalkiaceae
|
1942 |
Gracilibacillus dipsosauri |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1943 |
Gracilibacillus massiliensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1465 |
Gracilibacillus phocaeensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1944 |
Gracilibacillus thailandensis |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1466 |
Gracilibacillus timonensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
732 |
Granulicatella adiacens |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Carnobacteriaceae
|
733 |
Granulicatella elegans |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Carnobacteriaceae
|
1555 |
Granulicatella para-adiacens |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Carnobacteriaceae
|
734 |
Grimontia hollisae |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
2998 |
Gulosibacter bifidus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
2975 |
Haemophilus ducreyi |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
735 |
Haemophilus haemolyticus |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
736 |
Haemophilus influenzae |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
2490 |
Haemophilus parahaemolyticus |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
183 |
Haemophilus parainfluenzae |
Widespread Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
1624 |
Haemophilus paraphrohaemolyticus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
1625 |
Haemophilus pittmaniae |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
737 |
Haemophilus quentini |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
738 |
Haemophilus sputorum |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
739 |
Hafnia alvei |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1626 |
Hafnia paralvei |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Hafniaceae
|
2192 |
Hahella ganghwensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Oceanospirillales |
Hahellaceae
|
740 |
Halanaerobaculum tunisiense |
Unlikely Coloniser |
Firmicutes | Clostridia | Halanaerobiales |
Halobacteroidaceae
|
1945 |
Halobacillus dabanensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
3096 |
Halobacillus ihumii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1946 |
Halobacillus karajensis |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1463 |
Halobacillus massiliensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1947 |
Halobacillus salinus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1948 |
Halobacillus trueperi |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2491 |
Halobacteroides halobius |
Unlikely Coloniser |
Firmicutes | Clostridia | Halanaerobiales |
Halobacteroidaceae
|
2285 |
Haloferax alexandrinus |
Unlikely Coloniser |
Euryarchaeota | Halobacteria | Haloferacales |
Haloferacaceae
|
3091 |
Haloimpatiens massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1950 |
Halomonas massiliensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Oceanospirillales |
Halomonadaceae
|
2913 |
Halomonas muralis |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Oceanospirillales |
Halomonadaceae
|
1951 |
Halomonas salina |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Oceanospirillales |
Halomonadaceae
|
1952 |
Halomonas utahensis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Oceanospirillales |
Halomonadaceae
|
1953 |
Halopseudomonas bauzanensis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2548 |
Halopseudomonas pelagia |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2383 |
Haploplasma axanthum |
Unlikely Coloniser |
Tenericutes | Mollicutes | Acholeplasmatales |
Acholeplasmataceae
|
2286 |
Harryflintia acetispora |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1166 |
Hathewaya histolytica |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
579 |
Hathewaya limosa |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1503 |
Hathewaya massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1954 |
Helcobacillus massiliensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Dermabacteraceae
|
2193 |
Helcococcus sueciensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
1627 |
Helicobacter bilis |
Unlikely Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
741 |
Helicobacter canadensis |
Unlikely Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
1628 |
Helicobacter canis |
Unlikely Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
742 |
Helicobacter cinaedi |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
1955 |
Helicobacter felis |
Non-coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
1322 |
Helicobacter fennelliae |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
1956 |
Helicobacter heilmannii |
Non-coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
1629 |
Helicobacter macacae |
Unlikely Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
2287 |
Helicobacter pametensis |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
743 |
Helicobacter pullorum |
Minor Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
744 |
Helicobacter pylori |
Non-coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
2288 |
Helicobacter rodentium |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
745 |
Helicobacter winghamensis |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
2492 |
Heliomicrobium modesticaldum |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Heliobacteriaceae
|
2366 |
Herbaspirillum autotrophicum |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Oxalobacteraceae
|
1630 |
Herbaspirillum huttiense |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Oxalobacteraceae
|
2868 |
Herbinix hemicellulosilytica |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2493 |
Herbinix luporum |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1631 |
Herminiimonas contaminans |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Oxalobacteraceae
|
747 |
Hespellia porcina |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
748 |
Hespellia stercorisuis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1957 |
Heyndrickxia oleronia |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1763 |
Heyndrickxia sporothermodurans |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2494 |
Histophilus somni |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
1324 |
Holdemanella biformis |
Moderate Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
749 |
Holdemania filiformis |
Moderate Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
750 |
Holdemania massiliensis |
Minor Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
2194 |
Holophaga foetida |
Non-coloniser |
Acidobacteria | Holophagae | Holophagales |
Holophagaceae
|
751 |
Howardella ureilytica |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
3083 |
Hugonella massiliensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
2495 |
Humisphaera borealis |
Unlikely Coloniser |
Planctomycetes | Phycisphaerae | Tepidisphaerales |
Tepidisphaeraceae
|
1632 |
Hungatella effluvii |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
569 |
Hungatella hathewayi |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2676 |
Hungatella saccharolyticum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1764 |
Hungatella xylanolytica |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
417 |
Hydrogenibacillus schlegelii |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
752 |
Hydrogenoanaerobacterium saccharovorans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2289 |
Hydrogenophaga pseudoflava |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
2926 |
Hydrogenovibrio crunogenus |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Thiotrichales |
Piscirickettsiaceae
|
753 |
Hymenobacter rigui |
Rare Coloniser |
Bacteroidetes | Cytophagia | Cytophagales |
Cytophagaceae
|
2496 |
Hymenobacter russus |
Unlikely Coloniser |
Bacteroidetes | Cytophagia | Cytophagales |
Cytophagaceae
|
1633 |
Hyphomicrobium facile |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Hyphomicrobiaceae
|
1958 |
Ihubacter massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales incertae sedis |
Eubacteriales Family XIII. Incertae Sedis
|
3084 |
Ihuprevotella massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | None |
Prevotellaceae
|
2854 |
Ileibacterium valens |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
1326 |
Inediibacterium massiliense |
Rare Coloniser |
Firmicutes | Clostridia | Clostridiales |
Clostridiaceae
|
1822 |
Intestinibacillus massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
548 |
Intestinibacter bartlettii |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2497 |
Intestinibaculum porci |
Unlikely Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
185 |
Intestinimonas butyriciproducens |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
unclassified Clostridiales
|
1784 |
Intestinimonas gabonensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales incertae sedis
|
1328 |
Intestinimonas massiliensis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales incertae sedi
|
1467 |
Intestinimonas timonensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales incertae sedis
|
1959 |
Isoptericola variabilis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Promicromonosporaceae
|
1634 |
Janibacter anophelis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Intrasporangiaceae
|
1960 |
Janibacter hoylei |
Non-coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Intrasporangiaceae
|
754 |
Janibacter limosus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Intrasporangiaceae
|
755 |
Janibacter terrae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Intrasporangiaceae
|
2498 |
Jeotgalibaca arthritidis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Carnobacteriaceae
|
2499 |
Jeotgalibaca porci |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Carnobacteriaceae
|
2290 |
Jeotgalicoccus halotolerans |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
2195 |
Johnsonella ignava |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2500 |
Jonquetella anthropi |
Rare Coloniser |
Synergistetes | Synergistia | Synergistales |
Synergistaceae
|
1329 |
Kalamiella piersonii |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Erwiniaceae
|
1961 |
Kallipyga gabonensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Family XI Incertae Sedis
|
756 |
Kallipyga massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Family XI Incertae Sedis
|
757 |
Kandleria vitulina |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
758 |
Kerstersia gyiorum |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Alcaligenaceae
|
1330 |
Khelaifiella massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2871 |
Kineothrix alysoides |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1962 |
Kingella denitrificans |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
1963 |
Kingella kingae |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
759 |
Kingella oralis |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
2501 |
Kiritimatiella glycovorans |
Unlikely Coloniser |
Kiritimatiellaeota | Kiritimatiellae | Kiritimatiellales |
Kiritimatiellaceae
|
187 |
Klebsiella aerogenes |
Moderate Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2502 |
Klebsiella grimontii |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
292 |
Klebsiella michiganensis |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
189 |
Klebsiella oxytoca |
Moderate Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
190 |
Klebsiella pneumoniae |
Widespread Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1818 |
Klebsiella pneumoniae subsp. ozaenae |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2291 |
Klebsiella pneumoniae subsp. rhinoscleromatis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2292 |
Klebsiella quasipneumoniae subsp. quasipneumoniae |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2873 |
Klebsiella quasivariicola |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
191 |
Klebsiella variicola |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
760 |
Kluyvera ascorbata |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1744 |
Kluyvera cryocrescens |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1635 |
Kluyvera georgiana |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1745 |
Kluyvera intermedia |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2293 |
Kocuria carniphila |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
763 |
Kocuria marina |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
764 |
Kocuria palustris |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1964 |
Kocuria polaris |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
765 |
Kocuria rhizophila |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
766 |
Kocuria rosea |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1636 |
Kocuria salsicia |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1965 |
Kocuria varians |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1966 |
Kosakonia cowanii |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
974 |
Krasilnikoviella flava |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Promicromonosporaceae
|
767 |
Kurthia gibsonii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
768 |
Kurthia massiliensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
769 |
Kurthia senegalensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
770 |
Kurthia sp. Dielmo |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
1178 |
Kurthia zopfii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
1967 |
Kushneria sinocarnis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
771 |
Kytococcus schroeteri |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Dermacoccaceae
|
772 |
Kytococcus sedentarius |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Dermacoccaceae
|
2503 |
Labilithrix luteola |
Non-coloniser |
Proteobacteria | Deltaproteobacteria | Myxococcales |
Sorangiineae
|
1968 |
Lachnoanaerobaculum orale |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
773 |
Lachnoanaerobaculum saburreum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
774 |
Lachnoanaerobaculum umeaense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
775 |
Lachnobacterium bovis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1331 |
Lachnoclostridium bouchesdurhonense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1332 |
Lachnoclostridium edouardi |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1333 |
Lachnoclostridium massiliosenegalense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1275 |
Lachnoclostridium pacaense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2353 |
Lachnoclostridium phocaeense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
192 |
Lachnoclostridium phytofermentans |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
3067 |
Lachnoclostridium touaregense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
155 |
Lachnospira eligens |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2883 |
Lachnospira multipara |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
776 |
Lachnospira pectinoschiza |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2641 |
Lachnospira rogosae |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1969 |
Lacrimispora aerotolerans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1532 |
Lacrimispora amygdalina |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1533 |
Lacrimispora celerecrescens |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
573 |
Lacrimispora indolis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
115 |
Lacrimispora saccharolytica |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
598 |
Lacrimispora sphenoides |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
783 |
Lacticaseibacillus casei |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
200 |
Lacticaseibacillus paracasei |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2295 |
Lacticaseibacillus paracasei subsp. tolerans |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1338 |
Lacticaseibacillus paragasseri |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
201 |
Lacticaseibacillus rhamnosus |
Moderate Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
807 |
Lacticaseibacillus saniviri |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
809 |
Lacticaseibacillus sharpeae |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1970 |
Lacticaseibacillus zeae |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2196 |
Lacticigenium naphtae |
Non-coloniser |
Firmicutes | Bacilli | Lactobacillales |
Carnobacteriaceae
|
1182 |
Lactiplantibacillus paraplantarum |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
801 |
Lactiplantibacillus pentosus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
802 |
Lactiplantibacillus plantarum |
Moderate Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1637 |
Lactiplantibacillus xiangfangensis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
199 |
Lactobacillus acidophilus |
Widespread Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1638 |
Lactobacillus amylolyticus |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
778 |
Lactobacillus amylovorus |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
786 |
Lactobacillus crispatus |
Moderate Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1513 |
Lactobacillus delbrueckii subsp. bulgaricus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
788 |
Lactobacillus delbrueckii subsp. delbrueckii |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2294 |
Lactobacillus delbrueckii subsp. lactis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2612 |
Lactobacillus equicursoris |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
790 |
Lactobacillus gasseri |
Moderate Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2613 |
Lactobacillus gigeriorum |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2378 |
Lactobacillus hamsteri |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
792 |
Lactobacillus helveticus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2614 |
Lactobacillus hominis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
793 |
Lactobacillus iners |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1639 |
Lactobacillus intestinalis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
794 |
Lactobacillus jensenii |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
795 |
Lactobacillus johnsonii |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
796 |
Lactobacillus kalixensis |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
3052 |
Lactobacillus kefiranofaciens |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
797 |
Lactobacillus leichmannii |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2615 |
Lactobacillus pasteurii |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2616 |
Lactobacillus psittaci |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
804 |
Lactobacillus rogosae |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1339 |
Lactobacillus timonensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
810 |
Lactobacillus ultunensis |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1819 |
Lactococcus cremoris |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
812 |
Lactococcus garvieae |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
203 |
Lactococcus lactis subsp. lactis |
Widespread Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2825 |
Lactococcus petauri |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
813 |
Lactococcus plantarum |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
814 |
Lactococcus raffinolactis |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
815 |
Lactonifactor longoviformis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2504 |
Lacunisphaera limnophila |
Unlikely Coloniser |
Verrucomicrobia | Opitutae | Opitutales |
Opitutaceae
|
1971 |
Lagierella massiliensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
384 |
Lancefieldella parvula |
Minor Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
385 |
Lancefieldella rimae |
Minor Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
1785 |
Lapidilactobacillus dextrinicus |
Non-coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
816 |
Laribacter hongkongensis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
1972 |
Lascolabacillus massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
787 |
Latilactobacillus curvatus |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
805 |
Latilactobacillus sakei |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2907 |
Latilactobacillus sakei subsp. carnosus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
817 |
Lautropia mirabilis |
Minor Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
2197 |
Lawsonella clevelandensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Lawsonellaceae
|
2505 |
Lawsonia intracellularis |
Unlikely Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
1341 |
Lawsonibacter asaccharolyticus |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales incertae sedis
|
1342 |
Leclercia adecarboxylata |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1973 |
Lederbergia galactosidilyticus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1974 |
Lederbergia lentus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1975 |
Legionella bozemanae |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Legionellales |
Legionellaceae
|
1976 |
Legionella pneumophila |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Legionellales |
Legionellaceae
|
1742 |
Lelliottia amnigena |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2895 |
Lelliottia nimipressuralis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
818 |
Leminorella grimontii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
819 |
Leminorella richardii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1469 |
Lentibacillus massiliensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
3068 |
Lentibacillus timonensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
782 |
Lentilactobacillus buchneri subsp. buchneri |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2296 |
Lentilactobacillus diolivorans |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2617 |
Lentilactobacillus farraginis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1640 |
Lentilactobacillus hilgardii |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1977 |
Lentilactobacillus kefiri |
Non-coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2618 |
Lentilactobacillus kisonensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1978 |
Lentilactobacillus otakiensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
800 |
Lentilactobacillus parabuchneri |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2619 |
Lentilactobacillus parafarraginis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
808 |
Lentilactobacillus senioris |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1979 |
Leptospira interrogans |
Non-coloniser |
Spirochaetes | Spirochaetia | Leptospirales |
Leptospiralaceae
|
820 |
Leptotrichia amnionii |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Leptotrichiaceae
|
821 |
Leptotrichia buccalis |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Leptotrichiaceae
|
2918 |
Leptotrichia hofstadii |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Leptotrichiaceae
|
2919 |
Leptotrichia hongkongensis |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Leptotrichiaceae
|
1980 |
Leptotrichia massiliensis |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Leptotrichiaceae
|
3015 |
Leptotrichia shahii |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Leptotrichiaceae
|
2506 |
Leptotrichia wadei |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Leptotrichiaceae
|
1641 |
Leucobacter aridicollis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
1514 |
Leuconostoc carnosum |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
204 |
Leuconostoc citreum |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Leuconostocaceae
|
823 |
Leuconostoc gelidum |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Leuconostocaceae
|
2982 |
Leuconostoc gelidum subsp. gasicomitatum |
Non-coloniser |
Firmicutes | Bacilli | Lactobacillales |
Leuconostocaceae
|
2944 |
Leuconostoc holzapfelii |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1516 |
Leuconostoc inhae |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2991 |
Leuconostoc kimchii |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Leuconostocaceae
|
822 |
Leuconostoc lactis |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Leuconostocaceae
|
1981 |
Leuconostoc mesenteroides subsp. cremoris |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Leuconostocaceae
|
824 |
Leuconostoc mesenteroides subsp. mesenteroides |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Leuconostocaceae
|
1642 |
Leuconostoc pseudomesenteroides |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
781 |
Levilactobacillus brevis |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1982 |
Levilactobacillus brevis subsp. gravesensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2620 |
Levilactobacillus namurensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2621 |
Levilactobacillus parabrevis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2903 |
Levyella massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
None
|
1983 |
Ligilactobacillus acidipiscis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1179 |
Ligilactobacillus agilis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
779 |
Ligilactobacillus animalis |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2622 |
Ligilactobacillus ceti |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2623 |
Ligilactobacillus equi |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1643 |
Ligilactobacillus murinus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2624 |
Ligilactobacillus pobuzihii |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
202 |
Ligilactobacillus ruminis |
Widespread Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
806 |
Ligilactobacillus salivarius |
Widespread Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
825 |
Limnobacter thiooxidans |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
2507 |
Limnochorda pilosa |
Unlikely Coloniser |
Firmicutes | Limnochordia | Limnochordales |
Limnochordaceae
|
780 |
Limosilactobacillus antri |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
3064 |
Limosilactobacillus caccae |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
784 |
Limosilactobacillus coleohominis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
789 |
Limosilactobacillus fermentum |
Widespread Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1984 |
Limosilactobacillus frumenti |
Non-coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
791 |
Limosilactobacillus gastricus |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1985 |
Limosilactobacillus ingluviei |
Non-coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
798 |
Limosilactobacillus mucosae |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
799 |
Limosilactobacillus oris |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
803 |
Limosilactobacillus reuteri |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
811 |
Limosilactobacillus vaginalis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
3065 |
Limosilactobacillus walteri |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1986 |
Liquorilactobacillus mali |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1987 |
Liquorilactobacillus satsumensis |
Non-coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2625 |
Liquorilactobacillus vini |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2198 |
Listeria floridensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Listeriaceae
|
1184 |
Listeria grayi |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Listeriaceae
|
1185 |
Listeria innocua |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Listeriaceae
|
1186 |
Listeria ivanovii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Listeriaceae
|
2297 |
Listeria marthii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Listeriaceae
|
1187 |
Listeria monocytogenes |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Listeriaceae
|
1188 |
Listeria seeligeri |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Listeriaceae
|
1189 |
Listeria welshimeri |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Listeriaceae
|
2909 |
Litchfieldia alkalitelluris |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2606 |
Loigolactobacillus bifermentans |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
785 |
Loigolactobacillus coryniformis |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2363 |
Loigolactobacillus coryniformis subsp. torquens |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2298 |
Longicatena caecimuris |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
2904 |
Lutispora thermophila |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
3102 |
Luxibacter massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1988 |
Lysinibacillus boronitolerans |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Caryophanaceae
|
826 |
Lysinibacillus fusiformis |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Caryophanaceae
|
1989 |
Lysinibacillus macroides |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Caryophanaceae
|
1990 |
Lysinibacillus meyeri |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Caryophanaceae
|
828 |
Lysinibacillus sphaericus |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Caryophanaceae
|
1991 |
Lysinibacillus varians |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Caryophanaceae
|
1992 |
Lysinibacillus xylanilyticus |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Caryophanaceae
|
829 |
Lysobacter soli |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Lysobacterales |
Lysobacteraceae
|
1993 |
Macellibacteroides fermentans |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
1507 |
Macrococcus caseolyticus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
205 |
Mageeibacillus indolicus |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Hungateiclostridiaceae
|
2508 |
Mahella australiensis |
Unlikely Coloniser |
Firmicutes | Clostridia | Thermoanaerobacterales |
Thermoanaerobacterales Family IV. Incertae Sedis
|
1787 |
Mailhella massiliensis |
Rare Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2509 |
Mameliella alba |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Roseobacteraceae
|
2826 |
Mammaliicoccus fleurettii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1994 |
Mammaliicoccus lentus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1066 |
Mammaliicoccus sciuri |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1069 |
Mammaliicoccus vitulinus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
2299 |
Mannheimia granulomatis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
2199 |
Mannheimia haemolytica |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
2356 |
Mannheimia succiniciproducens |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
1348 |
Marasmitruncus massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1995 |
Marseilla massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
1736 |
Marseillibacter massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
830 |
Marvinbryantia formatexigens |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
831 |
Massilia aurea |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Oxalobacteraceae
|
2300 |
Massilia brevitalea |
Non-coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Oxalobacteraceae
|
1644 |
Massilia haematophila |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Oxalobacteraceae
|
1645 |
Massilia norwichensis |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Oxalobacteraceae
|
1996 |
Massilia timonae |
Non-coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Oxalobacteraceae
|
1646 |
Massilia varians |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Oxalobacteraceae
|
1349 |
Massilibacillus massiliensis |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
1350 |
Massilibacterium senegalense |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
3069 |
Massilicoli timonensis |
Rare Coloniser |
Firmicutes | Erysipelotrichales | Eubacteriales |
Erysipelotrichaceae
|
1794 |
Massiliimalia massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1351 |
Massiliimalia timonensis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1471 |
Massilimicrobiota timonensis |
Moderate Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
1823 |
Massilioclostridium coli |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1788 |
Massiliprevotella massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2510 |
Massilistercora timonensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales incertae sedis
|
1997 |
Mediterranea massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1472 |
Mediterraneibacter faecis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
568 |
Mediterraneibacter glycyrrhizinilyticus |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1496 |
Mediterraneibacter massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2472 |
Megalodesulfovibrio gigas |
Unlikely Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
832 |
Megamonas funiformis |
Minor Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
833 |
Megamonas hypermegale |
Moderate Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
1647 |
Megamonas rupellensis |
Rare Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
2877 |
Megasphaera cerevisiae |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
834 |
Megasphaera elsdenii |
Moderate Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
1353 |
Megasphaera indica |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
1354 |
Megasphaera massiliensis |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
1998 |
Megasphaera micronuciformis |
Minor Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
2511 |
Megasphaera stantonii |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
2914 |
Meiothermus silvanus |
Unlikely Coloniser |
Deinococcus-Thermus | Deinococci | Thermales |
Thermaceae
|
1730 |
Merdibacter massiliensis |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
1355 |
Merdimonas faecis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1999 |
Mesobacillus jeotgali |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2000 |
Mesobacillus subterraneus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2804 |
Mesorhizobium australicum |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhizobiales |
Phyllobacteriaceae
|
2301 |
Mesorhizobium jarvisii |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Phyllobacteriaceae
|
835 |
Mesorhizobium loti |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Phyllobacteriaceae
|
2889 |
Mesorhizobium muleiense |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhizobiales |
Phyllobacteriaceae
|
1356 |
Mesosutterella multiformis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
1648 |
Metabacillus galliciensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2302 |
Metabacillus idriensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2001 |
Metabacillus litoralis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2002 |
Metabacillus niabensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1357 |
Metakosakonia massiliensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2518 |
Metamycoplasma anseris |
Unlikely Coloniser |
Tenericutes | Mollicutes | Mycoplasmatales |
Mycoplasmataceae
|
2003 |
Metaprevotella massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2967 |
Methanococcus voltae |
Rare Coloniser |
Euryarchaeota | Methanococci | Methanococcales |
Methanococcaceae
|
2943 |
Methanomethylophilus alvus |
Rare Coloniser |
Candidatus Thermoplasmatota | Thermoplasmata | Methanomassiliicoccales |
Candidatus Methanomethylophilaceae
|
1359 |
Methanosphaera stadtmanae |
Minor Coloniser |
Euryarchaeota | Methanobacteria | Methanobacteriales |
Methanobacteriaceae
|
3046 |
Methylibium petroleiphilum |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sphaerotilaceae
|
836 |
Methylobacterium adhaesivum |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
2303 |
Methylobacterium brachiatum |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
837 |
Methylobacterium jeotgali |
Non-coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
838 |
Methylobacterium mesophilicum |
Non-coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
3009 |
Methylobacterium organophilum |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
1649 |
Methylobacterium oryzae |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
1650 |
Methylobacterium phyllosphaerae |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
840 |
Methylobacterium radiotolerans |
Non-coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
2512 |
Methylomusa anaerophila |
Unlikely Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Sporomusaceae
|
2304 |
Methylorubrum aminovorans |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
1534 |
Methylorubrum extorquens |
Non-coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
839 |
Methylorubrum populi |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
2305 |
Methylorubrum thiocyanatum |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
841 |
Methylorubrum zatmanii |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
2306 |
Methyloversatilis discipulorum |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodocyclales |
Rhodocyclaceae
|
842 |
Methyloversatilis universalis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Rhodocyclales |
Rhodocyclaceae
|
843 |
Microbacterium aurum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
844 |
Microbacterium chocolatum |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
2307 |
Microbacterium deminutum |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
2308 |
Microbacterium esteraromaticum |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
845 |
Microbacterium foliorum |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
1651 |
Microbacterium ginsengisoli |
Non-coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
846 |
Microbacterium gubbeenense |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
847 |
Microbacterium hydrocarbonoxydans |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
2008 |
Microbacterium kitamiense |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
848 |
Microbacterium lacticum |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
2009 |
Microbacterium liquefaciens |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
849 |
Microbacterium luteolum |
Non-coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
2010 |
Microbacterium maritypicum |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
1652 |
Microbacterium mitrae |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
2011 |
Microbacterium natoriense |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
850 |
Microbacterium oleivorans |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
2012 |
Microbacterium oxydans |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
851 |
Microbacterium paraoxydans |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
852 |
Microbacterium phyllosphaerae |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
2013 |
Microbacterium saccharophilum |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
853 |
Microbacterium schleiferi |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
1653 |
Microbacterium sediminicola |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
1654 |
Microbacterium testaceum |
Non-coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
2999 |
Microbispora rosea |
Rare Coloniser |
Actinobacteria | Actinomycetia | Streptosporangiales |
Streptosporangiaceae
|
1655 |
Micrococcus cohnii |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1656 |
Micrococcus endophyticus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
854 |
Micrococcus luteus |
Minor Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
855 |
Micrococcus lylae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
2200 |
Micrococcus terreus |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1657 |
Microlunatus phosphovorus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
856 |
Micromonospora aurantiaca |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micromonosporales |
Micromonosporaceae
|
2915 |
Micropruina glycogenica |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Nocardioidaceae
|
1658 |
Microvirga aerophila |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
857 |
Microvirga massiliensis |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Methylobacteriaceae
|
1360 |
Microvirgula aerodenitrificans |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Chromobacteriaceae
|
3080 |
Millionella massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
1361 |
Miniphocaeibacter massiliensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
858 |
Mitsuokella jalaludinii |
Minor Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
859 |
Mitsuokella multacida |
Moderate Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
1363 |
Mixta calida |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Erwiniaceae
|
1364 |
Mixta intestinalis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Erwiniaceae
|
1473 |
Mobilibacterium massiliense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales Family XIII. Incertae Sedis
|
1365 |
Mobilibacterium timonense |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales Family XIII. Incertae Sedis
|
2014 |
Mobilicoccus massiliensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
860 |
Mobiluncus curtisii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
861 |
Moellerella wisconsensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
862 |
Mogibacterium diversum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Mogibacteriaceae
|
863 |
Mogibacterium neglectum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Mogibacteriaceae
|
2309 |
Mogibacterium pumilum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Mogibacteriaceae
|
864 |
Mogibacterium timidum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Mogibacteriaceae
|
865 |
Mogibacterium vescum |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Mogibacteriaceae
|
1366 |
Monoglobus pectinilyticus |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2513 |
Moorella glycerini |
Unlikely Coloniser |
Firmicutes | Clostridia | Thermoanaerobacterales |
Thermoanaerobacteraceae
|
866 |
Moraxella catarrhalis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
867 |
Moraxella osloensis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Moraxellaceae
|
1789 |
Mordavella massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
868 |
Morganella morganii |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
869 |
Moryella indoligenes |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2949 |
Mucispirillum schaedleri |
Rare Coloniser |
Deferribacteres | Deferribacteres | Deferribacterales |
Mucispirillaceae
|
2015 |
Murdochiella asaccharolytica |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
2016 |
Murdochiella massiliensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
2514 |
Murdochiella vaginalis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
2515 |
Muribaculum gordoncarteri |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Muribaculaceae
|
2516 |
Muribaculum intestinale |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Muribaculaceae
|
1659 |
Murimonas intestini |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
870 |
Mycobacterium abscessus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
871 |
Mycobacterium avium |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
2017 |
Mycobacterium avium subsp. paratuberculosis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
2018 |
Mycobacterium colombiense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
872 |
Mycobacterium florentinum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
873 |
Mycobacterium fortuitum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
1369 |
Mycobacterium gastri |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
1370 |
Mycobacterium gordonae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
2019 |
Mycobacterium interjectum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
2020 |
Mycobacterium kansasii |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
2021 |
Mycobacterium lentiflavum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
2022 |
Mycobacterium simiae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
2023 |
Mycobacterium terrae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
2024 |
Mycobacterium tuberculosis |
Non-coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
2025 |
Mycobacterium tuberculosis variant africanum |
Non-coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
2026 |
Mycobacterium tuberculosis variant bovis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
2027 |
Mycobacteroides abscessus subsp. bolletii |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Mycobacteriaceae
|
1660 |
Mycolicibacterium aubagnense |
Non-coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Mycobacteriaceae
|
1368 |
Mycolicibacterium cosmeticum |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Mycobacteriaceae
|
2852 |
Mycolicibacterium houstonense |
Rare Coloniser |
Actinobacteria | Actinobacteria | Corynebacteriales |
Mycobacteriaceae
|
2517 |
Mycolicibacterium mageritense |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Mycobacteriaceae
|
2819 |
Mycolicibacterium neoaurum |
Rare Coloniser |
Actinobacteria | Actinobacteria | Corynebacteriales |
Mycobacteriaceae
|
874 |
Mycoplasma hominis |
Rare Coloniser |
Tenericutes | Mollicutes | Mycoplasmatales |
Mycoplasmataceae
|
2201 |
Mycoplasma muris |
Rare Coloniser |
Tenericutes | Mycoplasmoidales | Mycoplasmoidaceae |
Malacoplasma
|
875 |
Mycoplasma pneumoniae |
Rare Coloniser |
Tenericutes | Mollicutes | Mycoplasmatales |
Mycoplasmataceae
|
2519 |
Mycoplasmopsis arginini |
Unlikely Coloniser |
Tenericutes | Mollicutes | Mycoplasmatales |
Mycoplasmataceae
|
2520 |
Mycoplasmopsis californica |
Unlikely Coloniser |
Tenericutes | Mollicutes | Mycoplasmatales |
Mycoplasmataceae
|
2028 |
Myroides odoratimimus |
Unlikely Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
2029 |
Myroides odoratus |
Unlikely Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|
3047 |
Nakamurella multipartita |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Nakamurellales |
Nakamurellaceae
|
2430 |
Nanosynbacter lyticus |
Unlikely Coloniser |
Candidatus Saccharibacteria | Candidatus Saccharimonia | Candidatus Nanosynbacterales |
Candidatus Nanosynbacteraceae
|
2351 |
Nautilia nitratireducens |
Unlikely Coloniser |
Proteobacteria | Epsilonproteobacteria | Nautiliales |
Nautiliaceae
|
2522 |
Ndongobacter massiliensis |
Unlikely Coloniser |
Firmicutes | Firmicutes sensu stricto incertae sedis | None |
None
|
1372 |
Necropsobacter rosorum |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
1799 |
Negativibacillus massiliensis |
Minor Coloniser |
Firmicutes | Negativicutes | None |
Firmicutes sensu stricto incertae sedis
|
1373 |
Negativicoccus massiliensis |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
876 |
Negativicoccus succinicivorans |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
1374 |
Neglecta timonensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales incertae sedis
|
3053 |
Neisseria bacilliformis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
2030 |
Neisseria canis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
877 |
Neisseria cinerea |
Minor Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
878 |
Neisseria elongata |
Minor Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
879 |
Neisseria flava |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
880 |
Neisseria flavescens |
Minor Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
2031 |
Neisseria gonorrhoeae |
Non-coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
2202 |
Neisseria lactamica |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
881 |
Neisseria macacae |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
2032 |
Neisseria meningitidis |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
882 |
Neisseria mucosa |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
1661 |
Neisseria oralis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
883 |
Neisseria perflava |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
3032 |
Neisseria polysaccharea |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
2203 |
Neisseria shayeganii |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
1662 |
Neisseria sicca |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
884 |
Neisseria subflava |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
3082 |
Neoactinobaculum massilliense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
2033 |
Neobacillus bataviensis |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
2947 |
Neobacillus fumarioli |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1375 |
Neobacillus jeddahensis |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
3103 |
Neobacillus massiliamazoniensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
413 |
Neobacillus niacini |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
2034 |
Neobacillus pocheonensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
2035 |
Neobacillus soli |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
1376 |
Neobittarella massiliensis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2036 |
Neofamilia massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales incertae sedis
|
1377 |
Nesterenkonia massiliensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
885 |
Nevskia ramosa |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Nevskiales |
Nevskiaceae
|
412 |
Niallia nealsonii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1378 |
Niameybacter massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2038 |
Nigerium massiliense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
2310 |
Nitriliruptor alkaliphilus |
Unlikely Coloniser |
Actinobacteria | Nitriliruptoria | Nitriliruptorales |
Nitriliruptoraceae
|
2927 |
Nitrosomonas eutropha |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Nitrosomonadales |
Nitrosomonadaceae
|
2039 |
Nocardia asteroides |
Rare Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Nocardiaceae
|
2813 |
Nocardia brevicatena |
Rare Coloniser |
Actinobacteria | Actinobacteria | Corynebacteriales |
Nocardiaceae
|
2986 |
Nocardia cyriacigeorgica |
Rare Coloniser |
Actinobacteria | Actinobacteria | Corynebacteriales |
Nocardiaceae
|
2523 |
Nocardia mangyaensis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Nocardiaceae
|
2806 |
Nocardia otitidiscaviarum |
Rare Coloniser |
Actinobacteria | Actinobacteria | Corynebacteriales |
Nocardiaceae
|
2311 |
Nocardioides jensenii |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Nocardioidaceae
|
2369 |
Nocardioides kribbensis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Nocardioidaceae
|
1379 |
Nocardioides massiliensis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Nocardioidaceae
|
1380 |
Nosocomiicoccus massiliensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
746 |
Noviherbaspirillum massiliense |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Oxalobacteraceae
|
1663 |
Novosphingobium capsulatum |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
1382 |
Numidum massiliense |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1664 |
Obesumbacterium proteus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Hafniaceae
|
2473 |
Oceanidesulfovibrio marinus |
Unlikely Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2524 |
Oceanithermus profundus |
Unlikely Coloniser |
Deinococcus-Thermus | Deinococci | Thermales |
Thermaceae
|
886 |
Oceanobacillus caeni |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
2040 |
Oceanobacillus iheyensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
2041 |
Oceanobacillus jeddahense |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
2042 |
Oceanobacillus manasiensis |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
887 |
Oceanobacillus massiliensis |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
2043 |
Oceanobacillus oncorhynchi |
Non-coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
2044 |
Oceanobacillus picturae |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
1383 |
Oceanobacillus senegalensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
2045 |
Oceanobacillus sojae |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
1384 |
Oceanobacillus timonensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Bacillaceae
|
888 |
Ochrobactrum anthropi |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Brucellaceae
|
889 |
Ochrobactrum intermedium |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Brucellaceae
|
890 |
Odoribacter laneus |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Odoribacteraceae
|
2738 |
Odoribacter massiliensis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Odoribacteraceae
|
211 |
Odoribacter splanchnicus |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Odoribacteraceae
|
2828 |
Oenococcus oeni |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Leuconostocaceae
|
2046 |
Oerskovia turbata |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Cellulomonadaceae
|
2920 |
Okadaella gastrococcus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2870 |
Olegusella massiliensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
2355 |
Oleidesulfovibrio alaskensis |
Rare Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2942 |
Oleidesulfovibrio vietnamensis |
Rare Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2047 |
Oligella urethralis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Alcaligenaceae
|
1800 |
Olsenella congonensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
2048 |
Olsenella massiliensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
2049 |
Olsenella phocaeensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
891 |
Olsenella profusa |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
1801 |
Olsenella timonensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
892 |
Olsenella uli |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
2859 |
Olsenella urininfantis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
2841 |
Oribacterium asaccharolyticum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2958 |
Oribacterium parvum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
893 |
Oribacterium sinus |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2050 |
Ornithinibacillus contaminans |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1386 |
Ornithinibacillus massiliensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
212 |
Ornithobacterium rhinotracheale |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
1798 |
Oscillibacter massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2800 |
Oscillibacter ruminantium |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
214 |
Oscillibacter valericigenes |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1733 |
Oscillospira guillermondii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
3072 |
Ottowia massiliensis |
Rare Coloniser |
Pseudomonadota | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
894 |
Oxalobacter formigenes |
Moderate Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Oxalobacteraceae
|
2051 |
Pacaella massiliensis |
Rare Coloniser |
Synergistetes | Synergistia | Synergistales |
Synergistaceae
|
2052 |
Paenarthrobacter aurescens |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
2053 |
Paenarthrobacter ilicis |
Non-coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
895 |
Paenibacillus alvei |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2055 |
Paenibacillus amylolyticus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2056 |
Paenibacillus anaericanus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
896 |
Paenibacillus antibioticophila |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2057 |
Paenibacillus azoreducens |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
897 |
Paenibacillus barcinonensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
898 |
Paenibacillus barengoltzii |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2058 |
Paenibacillus borealis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1475 |
Paenibacillus bouchesdurhonensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2373 |
Paenibacillus chibensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1665 |
Paenibacillus chitinolyticus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2059 |
Paenibacillus cineris |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2374 |
Paenibacillus cookii |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
899 |
Paenibacillus daejeonensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2060 |
Paenibacillus dendritiformis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2526 |
Paenibacillus donghaensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
900 |
Paenibacillus durus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1387 |
Paenibacillus faecis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2061 |
Paenibacillus favisporus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
901 |
Paenibacillus glucanolyticus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
902 |
Paenibacillus graminis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2312 |
Paenibacillus ihuae |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1388 |
Paenibacillus ihumii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
903 |
Paenibacillus illinoisensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2062 |
Paenibacillus jamilae |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2313 |
Paenibacillus kribbensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
904 |
Paenibacillus lactis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2063 |
Paenibacillus larvae |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
905 |
Paenibacillus lautus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2064 |
Paenibacillus macerans |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1666 |
Paenibacillus motobuensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2527 |
Paenibacillus mucilaginosus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2065 |
Paenibacillus naphthalenovorans |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2066 |
Paenibacillus odorifer |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2067 |
Paenibacillus pabuli |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2068 |
Paenibacillus pasadenensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2069 |
Paenibacillus phocaensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1667 |
Paenibacillus polymyxa |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
906 |
Paenibacillus provencensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
907 |
Paenibacillus pueri |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
908 |
Paenibacillus rhizosphaerae |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2528 |
Paenibacillus riograndensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1476 |
Paenibacillus rubinfantis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
215 |
Paenibacillus sabinae |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
418 |
Paenibacillus senegalensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1389 |
Paenibacillus senegalimassiliensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2070 |
Paenibacillus stellifer |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
910 |
Paenibacillus thiaminolyticus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
911 |
Paenibacillus timonensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
1477 |
Paenibacillus tuaregi |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2071 |
Paenibacillus typhae |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2072 |
Paenibacillus urinalis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2073 |
Paenibacillus xylanilyticus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
566 |
Paeniclostridium ghonii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
216 |
Paeniclostridium sordellii |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
1668 |
Paenisporosarcina quisquiliarum |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
2204 |
Paludibacter jiangxiensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Paludibacteraceae
|
2529 |
Paludibacter propionicigenes |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Paludibacteraceae
|
2530 |
Paludibaculum fermentans |
Unlikely Coloniser |
Acidobacteria | Acidobacteriia | Bryobacterales |
Bryobacteraceae
|
2921 |
Paludicola psychrotolerans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1669 |
Pannonibacter phragmitetus |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Stappiaceae
|
912 |
Pantoea agglomerans |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2205 |
Pantoea conspicua |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Erwiniaceae
|
1748 |
Pantoea eucalypti |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Erwiniaceae
|
1670 |
Pantoea rodasii |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Enterobacterales |
Erwiniaceae
|
1390 |
Pantoea septica |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
3038 |
Pantoea vagans |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
913 |
Papillibacter cinnamivorans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1391 |
Parabacteroides bouchesdurhonensis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
2803 |
Parabacteroides chinchillae |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
217 |
Parabacteroides distasonis |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
1392 |
Parabacteroides faecis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
914 |
Parabacteroides goldsteinii |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
915 |
Parabacteroides gordonii |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
916 |
Parabacteroides johnsonii |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
1802 |
Parabacteroides massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
917 |
Parabacteroides merdae |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
3079 |
Parabacteroides pacaensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
3105 |
Parabacteroides pekinense |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
3078 |
Parabacteroides provencensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
1393 |
Parabacteroides timonensis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
1671 |
Paraburkholderia fungorum |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
3043 |
Paraburkholderia phytofirmans |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
2384 |
Paracholeplasma brassicae |
Unlikely Coloniser |
Tenericutes | Mollicutes | Acholeplasmatales |
Acholeplasmataceae
|
3059 |
Paraclostridium benzoelyticum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
550 |
Paraclostridium bifermentans |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
3000 |
Paracoccus aminovorans |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Rhodobacteraceae
|
918 |
Paracoccus carotinifaciens |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Rhodobacteraceae
|
2955 |
Paracoccus denitrificans |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Rhodobacteraceae
|
1672 |
Paracoccus haeundaensis |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Rhodobacteraceae
|
3001 |
Paracoccus marcusii |
Non-coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Rhodobacteraceae
|
919 |
Paracoccus marinus |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Rhodobacteraceae
|
1673 |
Paracoccus sphaerophysae |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Rhodobacteraceae
|
920 |
Paracoccus yeei |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Rhodobacteraceae
|
921 |
Paraeggerthella hongkongensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
2525 |
Parafannyhessea umbonata |
Unlikely Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
2074 |
Paraliobacillus quinghaiensis |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2820 |
Paramuribaculum intestinale |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Muribaculaceae
|
922 |
Paraprevotella clara |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
923 |
Paraprevotella xylaniphila |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2314 |
Pararheinheimera texasensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Chromatiales |
Chromatiaceae
|
2531 |
Parascardovia denticolens |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2928 |
Parasphingorhabdus flavimaris |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
924 |
Parasporobacterium paucivorans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
925 |
Parasutterella excrementihominis |
Moderate Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
926 |
Parasutterella secunda |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
1385 |
Paratractidigestivibacter faecalis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
2532 |
Paremcibacter congregatus |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Emcibacterales |
Emcibacteraceae
|
1394 |
Parolsenella catena |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
1395 |
Parolsenella massiliensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
1738 |
Parvibacter caecicola |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
220 |
Parvimonas micra |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptoniphilaceae
|
2992 |
Pasteurella aerogenes |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
2075 |
Pasteurella dagmatis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
2076 |
Pasteurella multocida |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
2077 |
Paucilactobacillus oligofermentans |
Non-coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2626 |
Paucilactobacillus suebicus |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2078 |
Paucilactobacillus vaccinostercus |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2079 |
Paucisalibacillus globulus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2742 |
Pauljensenia bouchesdurhonensis |
Minor Coloniser |
Actinobacteria | Actinobacteria | Actinomycetales |
Actinomycetaceae
|
2761 |
Pauljensenia cellulosilytica |
Rare Coloniser |
Actinobacteria | Actinobacteria | Actinomycetales |
Actinomycetaceae
|
2533 |
Pauljensenia hongkongensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
2758 |
Pauljensenia keddieii |
Minor Coloniser |
Actinobacteria | Actinobacteria | Micrococcales |
Sanguibacteraceae
|
2754 |
Pauljensenia odontolyticus |
Rare Coloniser |
Actinobacteria | Actinobacteria | Actinomycetales |
Actinomycetaceae
|
2793 |
Pauljensenia turicensis |
Rare Coloniser |
Actinobacteria | Actinobacteria | Actinomycetales |
Actinomycetaceae
|
2865 |
Pectobacterium wasabiae |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Pectobacteriaceae
|
927 |
Pediococcus acidilactici |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2628 |
Pediococcus claussenii |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
928 |
Pediococcus damnosus |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
929 |
Pediococcus pentosaceus |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2534 |
Pedobacter cryoconitis |
Non-coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingobacteriaceae
|
930 |
Pedobacter daejeonensis |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingobacteriaceae
|
2896 |
Pedobacter panaciterrae |
Unlikely Coloniser |
Bacteroidetes | Sphingobacteriia | Sphingobacteriales |
Sphingobacteriaceae
|
2206 |
Pedobacter terricola |
Non-coloniser |
Bacteroidetes | Sphingobacteriia | Sphingobacterales |
Sphingobacteriaceae
|
931 |
Pedomicrobium ferrugineum |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Hyphomicrobiaceae
|
1396 |
Pelistega indica |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Alcaligenaceae
|
3054 |
Pelobacter propionicus |
Rare Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfuromonadales |
Desulfuromonadaceae
|
1674 |
Pelomonas aquatica |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
1675 |
Pelomonas puraquae |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
932 |
Pelomonas saccharophila |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
571 |
Peptacetobacter hiranonis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2535 |
Peptoclostridium acidaminophilum |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
933 |
Peptococcus niger |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptococcaceae
|
934 |
Peptoniphilus asaccharolyticus |
Minor Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
1398 |
Peptoniphilus catoniae |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
3070 |
Peptoniphilus colimassiliensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
1676 |
Peptoniphilus duerdenii |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
2080 |
Peptoniphilus gorbachii |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
935 |
Peptoniphilus grossensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
936 |
Peptoniphilus harei |
Minor Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
937 |
Peptoniphilus indolicus |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
2536 |
Peptoniphilus ivorii |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
1803 |
Peptoniphilus koenoeneniae |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
938 |
Peptoniphilus lacrimalis |
Minor Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
1399 |
Peptoniphilus obesi |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
2081 |
Peptoniphilus pacaensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
1804 |
Peptoniphilus phoceensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
940 |
Peptoniphilus senegalensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
941 |
Peptoniphilus timonensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
942 |
Peptostreptococcus anaerobius |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
1805 |
Peptostreptococcus russellii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
943 |
Peptostreptococcus stomatis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
2315 |
Peribacillus psychrosaccharolyticus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
419 |
Peribacillus simplex |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2537 |
Petrimonas mucosa |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Dysgonomonadaceae
|
2082 |
Petrimonas sulfuriphila |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Dysgonomonadaceae
|
3002 |
Petrobacter succinatimandens |
Rare Coloniser |
Proteobacteria | Hydrogenophilalia | Hydrogenophilales |
Hydrogenophilaceae
|
2538 |
Petrocella atlantisensis |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Vallitaleaceae
|
944 |
Phascolarctobacterium faecium |
Minor Coloniser |
Firmicutes | Negativicutes | Acidaminococcales |
Acidaminococcaceae
|
945 |
Phascolarctobacterium succinatutens |
Moderate Coloniser |
Firmicutes | Negativicutes | Acidaminococcales |
Acidaminococcaceae
|
1677 |
Phenylobacterium falsum |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
946 |
Phenylobacterium haematophilum |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
2370 |
Phenylobacterium lituiforme |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Caulobacterales |
Caulobacteraceae
|
1535 |
Phocaeicola barnesiae |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
bacteroidaceae
|
429 |
Phocaeicola coprocola |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
430 |
Phocaeicola coprophilus |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
47 |
Phocaeicola dorei |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
438 |
Phocaeicola massiliensis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
2207 |
Phocaeicola paurosaccharolyticus |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
442 |
Phocaeicola plebeius |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
37 |
Phocaeicola salanitronis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1678 |
Phocaeicola sartorii |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1404 |
Phocaeicola vulgatus |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Bacteroidaceae
|
1806 |
Phocea massiliensis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1405 |
Phoenicibacter congonensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
947 |
Phyllobacterium myrsinacearum |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Phyllobacteriaceae
|
1406 |
Pigmentiphaga kullae |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Alcaligenaceae
|
2083 |
Planococcus massiliensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Caryophanaceae
|
948 |
Planococcus rifietoensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Caryophanaceae
|
949 |
Planomicrobium chinense |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Caryophanaceae
|
1679 |
Planomicrobium koreense |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
1680 |
Planomicrobium okeanokoites |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
950 |
Plesiomonas shigelloides |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1407 |
Pluralibacter gergoviae |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2831 |
Pontibacillus litoralis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
224 |
Porphyromonas asaccharolytica |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
1681 |
Porphyromonas bennonis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
2539 |
Porphyromonas cangingivalis |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
2860 |
Porphyromonas canoris |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
2540 |
Porphyromonas crevioricanis |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
951 |
Porphyromonas endodontalis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
225 |
Porphyromonas gingivalis |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
2899 |
Porphyromonas levii |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
2890 |
Porphyromonas macacae |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
952 |
Porphyromonas somerae |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
953 |
Porphyromonas uenonis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Porphyromonadaceae
|
1408 |
Pragia fontium |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Budviciaceae
|
954 |
Prevotella albensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
955 |
Prevotella amnii |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2969 |
Prevotella aurantiaca |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
1682 |
Prevotella baroniae |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
1683 |
Prevotella bergensis |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
956 |
Prevotella bivia |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
957 |
Prevotella brevis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
958 |
Prevotella bryantii |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
959 |
Prevotella buccae |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
1684 |
Prevotella buccalis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
960 |
Prevotella conceptionensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
961 |
Prevotella copri |
Widespread Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
962 |
Prevotella corporis |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
226 |
Prevotella dentalis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2838 |
Prevotella dentasini |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
227 |
Prevotella denticola |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
963 |
Prevotella disiens |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
964 |
Prevotella enoeca |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2869 |
Prevotella falsenii |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2541 |
Prevotella fusca |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2542 |
Prevotella herbatica |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2857 |
Prevotella histicola |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2815 |
Prevotella ihumii |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
228 |
Prevotella intermedia |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2084 |
Prevotella jejuni |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2795 |
Prevotella lascolaii |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
965 |
Prevotella loescheii |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2839 |
Prevotella maculosa |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
3100 |
Prevotella marseillensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2208 |
Prevotella marshii |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
230 |
Prevotella melaninogenica |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
3087 |
Prevotella merdae |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2209 |
Prevotella micans |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2844 |
Prevotella multiformis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2316 |
Prevotella multisaccharivorax |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
966 |
Prevotella nanceiensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
967 |
Prevotella nigrescens |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
275 |
Prevotella oralis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2085 |
Prevotella oris |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2858 |
Prevotella oryzae |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
968 |
Prevotella oulorum |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
969 |
Prevotella pallens |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2866 |
Prevotella paludivivens |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
1409 |
Prevotella phocaeensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
3016 |
Prevotella pleuritidis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
1410 |
Prevotella rara |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
3086 |
Prevotella rectalis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
231 |
Prevotella ruminicola |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2875 |
Prevotella saccharolytica |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
1685 |
Prevotella salivae |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2543 |
Prevotella scopos |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
2744 |
Prevotella seregens |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
970 |
Prevotella shahii |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
971 |
Prevotella stercorea |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
972 |
Prevotella timonensis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
973 |
Prevotella veroralis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
1807 |
Prevotellamassilia timonensis |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
400 |
Priestia flexa |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2086 |
Priestia koreensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
409 |
Priestia megaterium |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1686 |
Prochlorococcus marinus |
Rare Coloniser |
Cyanobacteria | Cyanobacteria | Synechococcales |
Prochlorococcaceae
|
1536 |
Prolixibacter bellariivorans |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Marinilabiliales |
Prolixibacteraceae
|
2087 |
Propionibacterium acidifaciens |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
977 |
Propionibacterium freudenreichii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
2088 |
Propionimicrobium lymphophilum |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
981 |
Prosthecobacter fluviatilis |
Rare Coloniser |
Verrucomicrobia | Verrucomicrobiae | Verrucomicrobiales |
Verrucomicrobiaceae
|
2544 |
Proteiniphilum saccharofermentans |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Dysgonomonadaceae
|
277 |
Proteus mirabilis |
Moderate Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Morganellaceae
|
982 |
Proteus penneri |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Morganellaceae
|
983 |
Proteus vulgaris |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Morganellaceae
|
1797 |
Provencibacterium massiliense |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
984 |
Providencia alcalifaciens |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1808 |
Providencia heimbachae |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Morganellaceae
|
985 |
Providencia rettgeri |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
986 |
Providencia rustigianii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
987 |
Providencia stuartii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
380 |
Pseudarthrobacter oxydans |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
381 |
Pseudarthrobacter polychromogenes |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1411 |
Pseudescherichia vulneris |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2933 |
Pseudobutyrivibrio ruminis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2545 |
Pseudobutyrivibrio xylanivorans |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2089 |
Pseudochrobactrum asaccharolyticum |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Brucellaceae
|
2317 |
Pseudochrobactrum saccharolyticum |
Rare Coloniser |
Proteobacteria | None | Hyphomicrobiales |
Brucellaceae
|
1479 |
Pseudocitrobacter anthropi |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1412 |
Pseudocitrobacter faecalis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2090 |
Pseudoclavibacter alba |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
2318 |
Pseudoclavibacter helvolus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
988 |
Pseudoclavibacter sp. Timone |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
1537 |
Pseudoclostridium thermosuccinogenes |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2546 |
Pseudodesulfovibrio aespoeensis |
Unlikely Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
2547 |
Pseudodesulfovibrio indicus |
Unlikely Coloniser |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales |
Desulfovibrionaceae
|
989 |
Pseudoflavonifractor capillosus |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
378 |
Pseudoglutamicibacter albus |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
2091 |
Pseudoglutamicibacter cumminsii |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
274 |
Pseudomonas aeruginosa |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2092 |
Pseudomonas alcaligenes |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
990 |
Pseudomonas alcaliphila |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
1413 |
Pseudomonas asiatica |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2796 |
Pseudomonas asplenii |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2093 |
Pseudomonas boreopolis |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Xanthomonadales |
Xanthomonadaceae incertae sedis
|
2094 |
Pseudomonas caricapapayae |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2095 |
Pseudomonas chlororaphis |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
1414 |
Pseudomonas citronellolis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
991 |
Pseudomonas fluorescens |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
1508 |
Pseudomonas fragi |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
1809 |
Pseudomonas fulva |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2096 |
Pseudomonas gessardii |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2097 |
Pseudomonas japonica |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2098 |
Pseudomonas libanensis |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
1810 |
Pseudomonas lundensis |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
1687 |
Pseudomonas luteola |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2099 |
Pseudomonas massiliensis |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2319 |
Pseudomonas mendocina |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2100 |
Pseudomonas migulae |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
992 |
Pseudomonas monteilii |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2101 |
Pseudomonas mosselii |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
993 |
Pseudomonas nitroreducens |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
994 |
Pseudomonas oleovorans |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
1415 |
Pseudomonas oryzihabitans |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
1688 |
Pseudomonas parafulva |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
3055 |
Pseudomonas protegens |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
995 |
Pseudomonas putida Biovar A |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
1478 |
Pseudomonas putida Biovar B |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2102 |
Pseudomonas rhodesiae |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2320 |
Pseudomonas saudiphocaensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2371 |
Pseudomonas straminea |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
996 |
Pseudomonas stutzeri |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2103 |
Pseudomonas taetrolens |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
234 |
Pseudomonas tolaasii |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2957 |
Pseudomonas veronii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2821 |
Pseudomonas weihenstephanensis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2104 |
Pseudomonas xanthomarina |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2321 |
Pseudomonas yamanorum |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
2322 |
Pseudomonas zhaodongensis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Pseudomonadales |
Pseudomonadaceae
|
3039 |
Pseudonocardia dioxanivorans |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Pseudonocardiales |
Pseudonocardiaceae
|
2549 |
Pseudoprevotella muciniphila |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Prevotellaceae
|
3081 |
Pseudopropionibacterium massiliense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
997 |
Pseudoramibacter alactolyticus |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriaceae
|
2210 |
Pseudoruegeria marinistellae |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Roseobacteraceae
|
1811 |
Pseudoruminococcus massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1689 |
Pseudoxanthomonas broegbernensis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Xanthomonadales |
Xanthomonadaceae
|
2323 |
Pseudoxanthomonas japonensis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Xanthomonadales |
Xanthomonadaceae
|
998 |
Pseudoxanthomonas mexicana |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Lysobacterales |
Lysobacteraceae
|
3033 |
Pseudoxanthomonas spadix |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Lysobacterales |
Lysobacteraceae
|
3027 |
Pseudoxanthomonas suwonensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Lysobacterales |
Lysobacteraceae
|
3005 |
Pseudoxanthomonas taiwanensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Lysobacterales |
Lysobacteraceae
|
1690 |
Psychrobacter alimentarius |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Moraxellales |
Moraxellaceae
|
999 |
Psychrobacter arenosus |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Moraxellales |
Moraxellaceae
|
1691 |
Psychrobacter cibarius |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Moraxellales |
Moraxellaceae
|
1812 |
Psychrobacter faecalis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Moraxellales |
Moraxellaceae
|
2948 |
Psychrobacter fulvigenes |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Moraxellales |
Moraxellaceae
|
1692 |
Psychrobacter maritimus |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Moraxellales |
Moraxellaceae
|
1693 |
Psychrobacter namhaensis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Moraxellales |
Moraxellaceae
|
2105 |
Psychrobacter phenylpyruvicus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Moraxellales |
Moraxellaceae
|
2106 |
Psychrobacter pulmonis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Moraxellales |
Moraxellaceae
|
2229 |
Pusillimonas faecalis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1416 |
Pygmaiobacter massiliensis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1000 |
Pyramidobacter piscolens |
Minor Coloniser |
Synergistetes | Synergistia | Synergistales |
Synergistaceae
|
1509 |
Rahnella aquatilis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1001 |
Ralstonia mannitolilytica |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
1417 |
Ralstonia pickettii Biovar Va-1&2 |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiaceae
|
235 |
Raoultella ornithinolytica |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1002 |
Raoultella planticola |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1003 |
Raoultella terrigena |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1480 |
Raoultibacter massiliensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
1418 |
Raoultibacter timonensis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
2325 |
Rheinheimera perlucida |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Chromatiales |
Chromatiaceae
|
1694 |
Rhizobium metallidurans |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Rhizobiaceae
|
2850 |
Rhizorhabdus wittichii |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
1004 |
Rhodanobacter ginsenosidimutans |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Lysobacterales |
Rhodanobacteraceae
|
1006 |
Rhodococcus erythropolis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Nocardiaceae
|
1005 |
Rhodococcus hoagii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Nocardiaceae
|
3029 |
Rhodococcus jostii |
Non-coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Nocardiaceae
|
3034 |
Rhodococcus opacus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Nocardiaceae
|
2326 |
Rhodococcus qingshengii |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Nocardiaceae
|
1007 |
Rhodococcus rhodochrous |
Rare Coloniser |
Actinobacteria | Actinomycetia | Mycobacteriales |
Nocardiaceae
|
2327 |
Rhodoplanes serenus |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Hyphomicrobiaceae
|
2551 |
Rhodothermus marinus |
Non-coloniser |
Bacteroidetes | None | Bacteroidetes Order II. Incertae sedis |
Rhodothermaceae
|
2328 |
Riemerella columbina |
Rare Coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Weeksellaceae
|
2807 |
Rikenella microfusus |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
1419 |
Risungbinella massiliensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Thermoactinomycetaceae
|
2107 |
Robertmurraya andreesenii |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2108 |
Robertmurraya kyonggiensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
408 |
Robertmurraya massiliosenegalensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1008 |
Robinsoniella peoriensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2552 |
Romboutsia hominis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
1695 |
Romboutsia ilealis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
580 |
Romboutsia lituseburensis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
2901 |
Romboutsia maritimum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
236 |
Romboutsia timonensis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
2874 |
Romboutsia weinsteinii |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
295 |
Roseburia faecis |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
237 |
Roseburia hominis |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
238 |
Roseburia intestinalis |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
240 |
Roseburia inulinivorans |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
3020 |
Roseobacter denitrificans |
Non-coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Roseobacteraceae
|
2109 |
Roseomonas gilardii |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodospirilliales |
Acetobacteraceae
|
1009 |
Roseomonas mucosa |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodospirilliales |
Acetobacteraceae
|
1762 |
Rossellomorea aquimaris |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
406 |
Rossellomorea marisflavi |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2110 |
Rossellomorea vietnamensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1010 |
Rothia aeria |
Minor Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1011 |
Rothia dentocariosa |
Minor Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
761 |
Rothia halotolerans |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
2329 |
Rothia koreensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
762 |
Rothia kristinae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
1012 |
Rothia mucilaginosa |
Moderate Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
2111 |
Rothia terrae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Micrococcaceae
|
2112 |
Rubeoparvulum massiliense |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
293 |
Rubinisphaera brasiliensis |
Non-coloniser |
Planctomycetes | Planctomycetia | Planctomycetales |
Planctomycetaceae
|
1420 |
Rubneribacter badeniensis |
Minor Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
2912 |
Rubrobacter xylanophilus |
Non-coloniser |
Actinobacteria | Rubrobacteria | Rubrobacterales |
Rubrobacteraceae
|
1013 |
Rudanella lutea |
Unlikely Coloniser |
Bacteroidetes | Cytophagia | Cytophagales |
Cytophagaceae
|
554 |
Ruminiclostridium cellobioparum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2553 |
Ruminiclostridium cellulolyticum |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2554 |
Ruminiclostridium herbifermentans |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2330 |
Ruminiclostridium josui |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1014 |
Ruminococcus albus |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
242 |
Ruminococcus bicirculans |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2555 |
Ruminococcus bovis |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
243 |
Ruminococcus bromii |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1015 |
Ruminococcus callidus |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
244 |
Ruminococcus champanellensis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1016 |
Ruminococcus flavefaciens |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1017 |
Ruminococcus gauvreauii |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1018 |
Ruminococcus gnavus |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1192 |
Ruminococcus lactaris |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
3071 |
Ruminococcus phoceensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
246 |
Ruminococcus torques |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2113 |
Rummeliibacillus pycnus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
2331 |
Rummeliibacillus stabekisii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
1813 |
Rummeliibacillus suwonensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
704 |
Ruoffia tabacinasalis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Aerococcaceae
|
1421 |
Ruthenibacterium lactatiformans |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2556 |
Saccharibacillus brassicae |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
2211 |
Saccharofermentans acetigenes |
Non-coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2114 |
Salimicrobium jeotgali |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2557 |
Salinicoccus halodurans |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
2115 |
Salinisphaera halophila |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Salinisphaerales |
Salinisphaeraceae
|
2116 |
Salinivibrio costicola |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
1505 |
Salmonella bongori |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
273 |
Salmonella enterica |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2117 |
Salmonella enterica subsp. arizonae |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2357 |
Salmonella enterica subsp. enterica serovar Choleraesuis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2332 |
Salmonella enterica subsp. enterica serovar Enteritidis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2118 |
Salmonella enterica subsp. enterica serovar Paratyphi A |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2333 |
Salmonella enterica subsp. enterica serovar Typhi |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2119 |
Salmonella enterica subsp. enterica serovar Typhimurium |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1422 |
Sanguibacter massiliensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Sanguibacteraceae
|
1019 |
Sarcina maxima |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1504 |
Sarcina ventriculi |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1021 |
Scardovia inopinata |
Rare Coloniser |
Actinobacteria | Actinomycetia | Bifidobacteriales |
Bifidobacteriaceae
|
2884 |
Scardovia wiggsiae |
Minor Coloniser |
Actinobacteria | Actinobacteria | Bifidobacteriales |
Bifidobacteriaceae
|
313 |
Schaalia cardiffensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
2911 |
Schaalia hyovaginalis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
2560 |
Schaalia meyeri |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
318 |
Schaalia odontolytica |
Moderate Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
320 |
Schaalia radingae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
321 |
Schaalia turicensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1786 |
Schleiferilactobacillus harbinensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2120 |
Schleiferilactobacillus perolens |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
2627 |
Schleiferilactobacillus shenzhenensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1022 |
Schlesneria paludicola |
Unlikely Coloniser |
Planctomycetes | Planctomycetia | Planctomycetales |
Planctomycetaceae
|
2561 |
Schnuerera ultunensis |
Unlikely Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Tissierellaceae
|
2562 |
Sebaldella termitidis |
Unlikely Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Leptotrichiaceae
|
1481 |
Sediminibacillus massiliensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2563 |
Sediminispirochaeta smaragdinae |
Unlikely Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Spirochaetaceae
|
2989 |
Selenomonas artemidis |
Rare Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
2894 |
Selenomonas bovis |
Rare Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
3017 |
Selenomonas flueggei |
Rare Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
3018 |
Selenomonas infelix |
Rare Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
1696 |
Selenomonas noxia |
Rare Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
1023 |
Selenomonas ruminantium |
Minor Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
2121 |
Selenomonas sputigena |
Rare Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
2564 |
Selenomonas timonae |
Unlikely Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Selenomonadaceae
|
1423 |
Sellimonas intestinalis |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1424 |
Senegalia massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1425 |
Senegalimassilia anaerobia |
Minor Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
1482 |
Senegalimassilia faecalis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Coriobacteriaceae
|
1025 |
Serratia ficaria |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1026 |
Serratia fonticola |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1027 |
Serratia liquefaciens |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1028 |
Serratia marcescens |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1426 |
Serratia odorifera |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
2334 |
Serratia quinivorans |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
2122 |
Serratia ureilytica |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
2812 |
Sharpea azabuensis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1510 |
Shewanella algae |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Alteromonadales |
Shewanellaceae
|
1483 |
Shewanella carassii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Alteromonadales |
Shewanellaceae
|
2797 |
Shewanella decolorationis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Alteromonadales |
Shewanellaceae
|
2123 |
Shewanella xiamenensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Alteromonadales |
Shewanellaceae
|
1506 |
Shigella boydii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1029 |
Shigella dysenteriae |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1030 |
Shigella flexneri |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1031 |
Shigella sonnei |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2887 |
Shuttleworthia satelles |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
1032 |
Silanimonas lenta |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Lysobacterales |
Lysobacteraceae
|
1033 |
Skermanella aerolata |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodospirillales |
Azospirillaceae
|
1034 |
Slackia equolifaciens |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
1035 |
Slackia exigua |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
1740 |
Slackia faecicanis |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
2212 |
Slackia heliotrinireducens |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
1036 |
Slackia isoflavoniconvertens |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
1037 |
Slackia piriformis |
Minor Coloniser |
Actinobacteria | Coriobacteriia | Eggerthellales |
Eggerthellaceae
|
1697 |
Sneathia sanguinegens |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Leptotrichiaceae
|
2905 |
Sneathia vaginalis |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Leptotrichiaceae
|
2565 |
Sodaliphilus pleomorphus |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Muribaculaceae
|
1038 |
Soleaferrea massiliensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2124 |
Solibacillus silvestris |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
2605 |
Solibaculum mannosilyticum |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1039 |
Solobacterium moorei |
Minor Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
2566 |
Sorangium cellulosum |
Rare Coloniser |
Proteobacteria | Deltaproteobacteria | Myxococcales |
Sorangiineae
|
1698 |
Sphaerotilus natans |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiales genera incertae sedis
|
1699 |
Sphingobacterium alimentarium |
Unlikely Coloniser |
Bacteroidetes | Sphingobacteriia | Sphingobacterales |
Sphingobacteriaceae
|
252 |
Sphingobacterium faecium |
Rare Coloniser |
Bacteroidetes | Sphingobacteriia | Sphingobacteriales |
Sphingobacteriaceae
|
1700 |
Sphingobacterium mizutaii |
Unlikely Coloniser |
Bacteroidetes | Sphingobacteriia | Sphingobacterales |
Sphingobacteriaceae
|
1040 |
Sphingobacterium multivorum |
Rare Coloniser |
Bacteroidetes | Sphingobacteriia | Sphingomonadales |
Sphingobacteriaceae
|
1701 |
Sphingobacterium nematocida |
Unlikely Coloniser |
Bacteroidetes | Sphingobacteriia | Sphingobacterales |
Sphingobacteriaceae
|
2993 |
Sphingobacterium siyangense |
Rare Coloniser |
Bacteroidetes | Sphingobacteriia | Sphingobacterales |
Sphingobacteriaceae
|
2964 |
Sphingobacterium spiritivorum |
Rare Coloniser |
Bacteroidetes | Sphingobacteriia | Sphingobacteriales |
Sphingobacteriaceae
|
2567 |
Sphingobacterium thalpophilum |
Unlikely Coloniser |
Bacteroidetes | Sphingobacteriia | Sphingobacterales |
Sphingobacteriaceae
|
1702 |
Sphingobium xenophagum |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
1041 |
Sphingomonas adhaesiva |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
2125 |
Sphingomonas aerolata |
Non-coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
1703 |
Sphingomonas aestuarii |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
3006 |
Sphingomonas azotifigens |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
2372 |
Sphingomonas bisphenolicum |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
1704 |
Sphingomonas echinoides |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
1705 |
Sphingomonas glacialis |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
2335 |
Sphingomonas hankookensis |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
1706 |
Sphingomonas koreensis |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
2336 |
Sphingomonas melonis |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
1042 |
Sphingomonas panni |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
1043 |
Sphingomonas paucimobilis |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
1044 |
Sphingomonas pseudosanguinis |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
2568 |
Sphingomonas sinipercae |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
3007 |
Sphingomonas yabuuchiae |
Rare Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
1707 |
Sphingopyxis bauzanensis |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Sphingomonadales |
Sphingomonadaceae
|
2569 |
Spiribacter roseus |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Chromatiales |
Ectothiorhodospiraceae
|
2963 |
Spirochaeta coccoides |
Rare Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Sphaerochaetaceae
|
2570 |
Spirochaeta thermophila |
Non-coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Spirochaetaceae
|
1045 |
Spirosoma linguale |
Unlikely Coloniser |
Bacteroidetes | Cytophagia | Cytophagales |
Cytophagaceae
|
1734 |
Sporobacter termitidis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2126 |
Sporolactobacillus laevolacticus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Sporolactobacillaceae
|
2952 |
Sporolactobacillus nakayamae subsp. racemicus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Sporolactobacillaceae
|
2571 |
Sporomusa termitida |
Unlikely Coloniser |
Firmicutes | Negativicutes | Selenomonadales |
Sporomusaceae
|
2127 |
Sporosarcina aquimarina |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
1046 |
Sporosarcina koreensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
2128 |
Sporosarcina luteola |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
1708 |
Sporosarcina siberiensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Planococcaceae
|
2572 |
Stackebrandtia nassauensis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Glycomycetales |
Glycomycetaceae
|
1047 |
Staphylococcus arlettae |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1048 |
Staphylococcus aureus subsp. aureus |
Minor Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1049 |
Staphylococcus auricularis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1050 |
Staphylococcus capitis subsp. capitis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1051 |
Staphylococcus caprae |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
2129 |
Staphylococcus carnosus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1052 |
Staphylococcus cohnii subsp. cohnii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1053 |
Staphylococcus condimenti |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
2130 |
Staphylococcus devriesei |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1054 |
Staphylococcus epidermidis |
Widespread Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1055 |
Staphylococcus equorum subsp. equorum |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
2338 |
Staphylococcus gallinarum |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1056 |
Staphylococcus haemolyticus |
Minor Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1057 |
Staphylococcus hominis subsp. hominis |
Minor Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
2131 |
Staphylococcus hyicus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1058 |
Staphylococcus intermedius |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1059 |
Staphylococcus kloosii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1060 |
Staphylococcus lugdunensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1709 |
Staphylococcus nepalensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1061 |
Staphylococcus pasteuri |
Minor Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
2132 |
Staphylococcus petrasii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1062 |
Staphylococcus pettenkoferi |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1710 |
Staphylococcus pseudintermedius |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1063 |
Staphylococcus saccharolyticus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1064 |
Staphylococcus saprophyticus subsp. saprophyticus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1065 |
Staphylococcus schleiferi subsp. schleiferi |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
2916 |
Staphylococcus simiae |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1067 |
Staphylococcus simulans |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1068 |
Staphylococcus succinus subsp. succinus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1070 |
Staphylococcus warneri |
Minor Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
1071 |
Staphylococcus xylosus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Staphylococcaceae
|
3040 |
Starkeya novella |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Hyphomicrobiales |
Xanthobacteraceae
|
1814 |
Stenotrophomonas acidaminiphila |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Xanthomonadales |
Xanthomonadaceae
|
2881 |
Stenotrophomonas bentonitica |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Xanthomonadales |
Xanthomonadaceae
|
1072 |
Stenotrophomonas maltophilia |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Xanthomonadales |
Xanthomonadaceae
|
1073 |
Stenotrophomonas rhizophila |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Xanthomonadales |
Xanthomonadaceae
|
1711 |
Stomatobaculum longum |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2213 |
Streptobacillus hongkongensis |
Rare Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Leptotrichiaceae
|
2573 |
Streptobacillus moniliformis |
Unlikely Coloniser |
Fusobacteria | Fusobacteriia | Fusobacteriales |
Leptotrichiaceae
|
2574 |
Streptococcus acidominimus |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1074 |
Streptococcus agalactiae |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1075 |
Streptococcus alactolyticus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1076 |
Streptococcus anginosus |
Widespread Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2339 |
Streptococcus anginosus subsp. whileyi |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1077 |
Streptococcus australis |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2340 |
Streptococcus caballi |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2575 |
Streptococcus canis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2133 |
Streptococcus castoreus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1079 |
Streptococcus constellatus subsp. constellatus |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1080 |
Streptococcus cristatus |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2214 |
Streptococcus danieliae |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2215 |
Streptococcus didelphis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2341 |
Streptococcus downei |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1081 |
Streptococcus dysgalactiae |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2361 |
Streptococcus dysgalactiae subsp. equisimilis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1082 |
Streptococcus equi subsp. equi |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1083 |
Streptococcus equinus |
Moderate Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2216 |
Streptococcus ferus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1084 |
Streptococcus gallolyticus subsp. gallolyticus |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1085 |
Streptococcus gordonii |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2576 |
Streptococcus gwangjuense |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2342 |
Streptococcus henryi |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2343 |
Streptococcus hyovaginalis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2577 |
Streptococcus ilei |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1086 |
Streptococcus infantarius |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1429 |
Streptococcus infantarius subsp. infantarius |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1087 |
Streptococcus infantis |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1088 |
Streptococcus intermedius |
Moderate Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2578 |
Streptococcus koreensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
3108 |
Streptococcus lactarius |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1089 |
Streptococcus lutetiensis |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2579 |
Streptococcus macedonicus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2344 |
Streptococcus merionis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
253 |
Streptococcus mitis |
Moderate Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1090 |
Streptococcus mutans |
Moderate Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1091 |
Streptococcus oralis |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2134 |
Streptococcus oralis subsp. tigurinus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2891 |
Streptococcus orisratti |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2345 |
Streptococcus ovis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2217 |
Streptococcus pantholopis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
254 |
Streptococcus parasanguinis |
Widespread Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2218 |
Streptococcus parasuis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1092 |
Streptococcus parauberis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
294 |
Streptococcus pasteurianus |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2581 |
Streptococcus periodonticum |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1093 |
Streptococcus peroris |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2582 |
Streptococcus pluranimalium |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2346 |
Streptococcus plurextorum |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1095 |
Streptococcus pneumoniae |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2347 |
Streptococcus porci |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1096 |
Streptococcus pseudopneumoniae |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2135 |
Streptococcus pseudoporcinus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1097 |
Streptococcus pyogenes |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2348 |
Streptococcus rubneri |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
257 |
Streptococcus salivarius |
Widespread Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1098 |
Streptococcus sanguinis |
Moderate Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2219 |
Streptococcus sinensis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2136 |
Streptococcus sobrinus |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
262 |
Streptococcus suis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
263 |
Streptococcus thermophilus |
Widespread Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1099 |
Streptococcus thoraltensis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
2137 |
Streptococcus timonensis |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1100 |
Streptococcus uberis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1101 |
Streptococcus vestibularis |
Moderate Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1102 |
Streptococcus viridans |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Streptococcaceae
|
1712 |
Streptomyces albus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Streptomycetales |
Streptomycetaceae
|
3022 |
Streptomyces flavogriseus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Streptomycetales |
Streptomycetaceae
|
3048 |
Streptomyces hygroscopicus |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Streptomycetales |
Streptomycetaceae
|
2138 |
Streptomyces koyangensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Streptomycetales |
Streptomycetaceae
|
3057 |
Streptomyces lividans |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Streptomycetales |
Streptomycetaceae
|
1103 |
Streptomyces massiliensis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Streptomycetales |
Streptomycetaceae
|
1104 |
Streptomyces misionensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Streptomycetales |
Streptomycetaceae
|
2978 |
Streptomyces specialis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Streptomycetales |
Streptomycetaceae
|
1105 |
Streptomyces thermoviolaceus |
Rare Coloniser |
Actinobacteria | Actinomycetia | Streptomycetales |
Streptomycetaceae
|
1106 |
Streptomyces thermovulgaris |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Streptomycetales |
Streptomycetaceae
|
3028 |
Streptomyces violaceusniger |
Unlikely Coloniser |
Actinobacteria | None | Streptomycetales |
Streptomycetaceae
|
3058 |
Streptosporangium roseum |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Streptosporangiales |
Streptosporangiaceae
|
265 |
Subdoligranulum formicile |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1107 |
Subdoligranulum variabile |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1108 |
Succinatimonas hippei |
Minor Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Succinivibrionaceae
|
1109 |
Succinivibrio dextrinosolvens |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Aeromonadales |
Succinivibrionaceae
|
2220 |
Sulfurospirillum deleyianum |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Campylobacteraceae
|
1159 |
Sutcliffiella cohnii |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2583 |
Sutterella faecalis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
1792 |
Sutterella massiliensis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
1430 |
Sutterella megalosphaeroides |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
1110 |
Sutterella parvirubra |
Minor Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
1484 |
Sutterella seckii |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
1111 |
Sutterella stercoricanis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
1791 |
Sutterella timonensis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
1112 |
Sutterella wadsworthensis |
Widespread Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
2584 |
Symbiobacterium thermophilum |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Symbiobacteriaceae
|
2929 |
Symbiobacterium toebii |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Symbiobacteriaceae
|
2585 |
Syntrophobotulus glycolicus |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptococcaceae
|
2922 |
Syntrophococcus sucromutans |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Lachnospiraceae
|
2892 |
Syntrophomonas zehnderi |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Syntrophomonadaceae
|
268 |
Tannerella forsythia |
Minor Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
2586 |
Tannerella serpentiformis |
Unlikely Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Tannerellaceae
|
1713 |
Taonella mepensis |
Unlikely Coloniser |
Proteobacteria | Alphaproteobacteria | Rhodospirillales |
Rhodospirillaceae
|
1113 |
Tatumella ptyseos |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
2587 |
Tepidanaerobacter acetatoxydans |
Rare Coloniser |
Firmicutes | Clostridia | Thermosediminibacterales |
Tepidanaerobacteraceae
|
2588 |
Tepiditoga spiralis |
Unlikely Coloniser |
Thermotogae | Thermotogae | Petrotogales |
Petrotogaceae
|
1539 |
Terrahaemophilus aromaticivorans |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Pasteurellales |
Pasteurellaceae
|
2139 |
Terribacillus aidingensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2140 |
Terribacillus halophilus |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
567 |
Terrisporobacter glycolicus |
Minor Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1714 |
Terrisporobacter mayombei |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
2811 |
Terrisporobacter othiniensis |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
3010 |
Terrisporobacter petrolearius |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Peptostreptococcaceae
|
1431 |
Tessaracoccus massiliensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
1715 |
Tetragenococcus halophilus |
Unlikely Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
2141 |
Tetragenococcus koreensis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1114 |
Tetragenococcus solitarius |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1716 |
Thalassobacillus devorans |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1717 |
Thauera terpenica |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Rhodocyclales |
Zoogloeaceae
|
2589 |
Thermaerobacter marianensis |
Non-coloniser |
Firmicutes | Clostridia | Eubacteriales |
Eubacteriales Family XVII. Incertae Sedis
|
2968 |
Thermoanaerobacterium thermosaccharolyticum |
Rare Coloniser |
Firmicutes | Clostridia | Thermoanaerobacterales |
Thermoanaerobacterales Family III. Incertae Sedis
|
2590 |
Thermobacillus composti |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Paenibacillaceae
|
3041 |
Thermobispora bispora |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Streptosporangiales |
Streptosporangiaceae
|
1735 |
Thermoclostridium stercorarium |
Unlikely Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2930 |
Thermolithobacter ferrireducens |
Non-coloniser |
Firmicutes | Thermolithobacteria | Thermolithobacterales |
Thermolithobacteraceae
|
1718 |
Thermomonas carbonis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Xanthomonadales |
Xanthomonadaceae
|
3042 |
Thermomonospora curvata |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Streptosporangiales |
Thermomonosporaceae
|
2591 |
Thermophilibacter immobilis |
Unlikely Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
2856 |
Thermophilibacter mediterraneus |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
2143 |
Thermophilibacter provencensis |
Minor Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
1719 |
Thermus scotoductus |
Unlikely Coloniser |
Deinococcus-Thermus | Deinococci | Thermales |
Thermaceae
|
2994 |
Thiomonas islandica |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Burkholderiales genera incertae sedis
|
591 |
Thomasclavelia saccharogumia |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
599 |
Thomasclavelia spiroformis |
Moderate Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
2707 |
Tidjanibacter inops |
Moderate Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
1815 |
Tidjanibacter massiliensis |
Rare Coloniser |
Bacteroidetes | Bacteroidia | Bacteroidales |
Rikenellaceae
|
1115 |
Timonella senegalensis |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Jonesiaceae
|
1116 |
Tissierella praeacuta |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Tissierellaceae
|
1117 |
Trabulsiella guamensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1720 |
Tractidigestivibacter scatoligenes |
Rare Coloniser |
Actinobacteria | Coriobacteriia | Coriobacteriales |
Atopobiaceae
|
2801 |
Traorella massiliensis |
Rare Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
1118 |
Treponema berlinense |
Rare Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
2592 |
Treponema brennaborense |
Unlikely Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
2961 |
Treponema denticola |
Rare Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
2593 |
Treponema medium |
Unlikely Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
2375 |
Treponema parvum |
Unlikely Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
2221 |
Treponema pectinovorum |
Rare Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
2594 |
Treponema pedis |
Unlikely Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
2233 |
Treponema peruense |
Rare Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
2595 |
Treponema phagedenis |
Unlikely Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
2596 |
Treponema primitia |
Unlikely Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
2597 |
Treponema ruminis |
Unlikely Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
2598 |
Treponema socranskii |
Unlikely Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
270 |
Treponema succinifaciens |
Rare Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
3019 |
Treponema vincentii |
Rare Coloniser |
Spirochaetes | Spirochaetia | Spirochaetales |
Treponemataceae
|
1119 |
Tropheryma whipplei |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Tropherymataceae
|
1120 |
Trueperella bernardiae |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
375 |
Trueperella pyogenes |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1721 |
Tsukamurella pulmonis |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Corynebacteriales |
Tsukamurellaceae
|
2599 |
Tumebacillus avium |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Alicyclobacillaceae
|
1121 |
Tumebacillus permanentifrigoris |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Alicyclobacillaceae
|
1122 |
Turicibacter sanguinis |
Moderate Coloniser |
Firmicutes | Erysipelotrichia | Erysipelotrichales |
Erysipelotrichaceae
|
2600 |
Turicimonas muris |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Sutterellaceae
|
585 |
Tyzzerella nexilis |
Widespread Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Clostridiaceae
|
1123 |
Ureaplasma parvum |
Rare Coloniser |
Tenericutes | Mollicutes | Mycoplasmatales |
Mycoplasmataceae
|
1124 |
Ureaplasma urealyticum |
Rare Coloniser |
Tenericutes | Mollicutes | Mycoplasmatales |
Mycoplasmataceae
|
827 |
Ureibacillus massiliensis |
Rare Coloniser |
Firmicutes | Bacilli | Caryophanales |
Caryophanaceae
|
1125 |
Ureibacillus suwonensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Caryophanales |
Caryophanaceae
|
1126 |
Ureibacillus thermosphaericus |
Non-coloniser |
Firmicutes | Bacilli | Caryophanales |
Caryophanaceae
|
3095 |
Urinicoccus timonensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Peptoniphilaceae
|
1757 |
Urmitella timonensis |
Rare Coloniser |
Firmicutes | Tissierellia | Tissierellales |
Tissierellaceae
|
1722 |
Uruburuella suis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
2601 |
Vaginimicrobium propionicum |
Unlikely Coloniser |
Actinobacteria | Actinomycetia | Propionibacteriales |
Propionibacteriaceae
|
2350 |
Vagococcus carniphilus |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1816 |
Vagococcus fluvialis |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1817 |
Vagococcus lutrae |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
2144 |
Vagococcus penaei |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
2145 |
Vagococcus teuberi |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Enterococcaceae
|
1723 |
Vampirovibrio chlorellavorus |
Unlikely Coloniser |
Cyanobacteria | Candidatus Melainabacteria | Vampirovibrionales |
None
|
1127 |
Varibaculum cambriense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
2906 |
Varibaculum timonense |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
1128 |
Variovorax boronicumulans |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
1540 |
Variovorax ginsengisoli |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
1724 |
Variovorax paradoxus |
Unlikely Coloniser |
Proteobacteria | Betaproteobacteria | Burkholderiales |
Comamonadaceae
|
1129 |
Veillonella atypica |
Widespread Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
2146 |
Veillonella denticariosi |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
1130 |
Veillonella dispar |
Moderate Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
2829 |
Veillonella infantium |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
2222 |
Veillonella magna |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
1432 |
Veillonella montpellierensis |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
2602 |
Veillonella nakazawae |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
271 |
Veillonella parvula |
Widespread Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
1131 |
Veillonella ratti |
Rare Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
2603 |
Veillonella rodentium |
Unlikely Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
1132 |
Veillonella rogosae |
Minor Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
2843 |
Veillonella tobetsuensis |
Minor Coloniser |
Firmicutes | Negativicutes | Veillonellales |
Veillonellaceae
|
2231 |
Vescimonas coprocola |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
2230 |
Vescimonas fastidiosa |
Rare Coloniser |
Firmicutes | Clostridia | Eubacteriales |
Oscillospiraceae
|
1433 |
Vibrio alginolyticus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
1511 |
Vibrio cholerae |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Veillonellales |
Veillonellaceae
|
1434 |
Vibrio cincinnatiensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
1133 |
Vibrio fluvialis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
1134 |
Vibrio furnissii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
2147 |
Vibrio metoecus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
2148 |
Vibrio metschnikovii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
1135 |
Vibrio mimicus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
1725 |
Vibrio natriegens |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
2223 |
Vibrio neptunius |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
1136 |
Vibrio parahaemolyticus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
2224 |
Vibrio proteolyticus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
3008 |
Vibrio rumoiensis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
2149 |
Vibrio vulnificus |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Vibrionales |
Vibrionaceae
|
1137 |
Victivallis vadensis |
Minor Coloniser |
Lentisphaerae | Lentisphaeria | Victivallales |
Victivallaceae
|
1435 |
Virgibacillus dakarensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2150 |
Virgibacillus dokdonensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
3093 |
Virgibacillus doumboii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2151 |
Virgibacillus halodenitrificans |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
3094 |
Virgibacillus ihumii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1436 |
Virgibacillus massiliensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1437 |
Virgibacillus ndiopensis |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2152 |
Virgibacillus pantothenticus |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2842 |
Virgibacillus profundi |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1138 |
Virgibacillus proomii |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1726 |
Virgibacillus salexigens |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2153 |
Virgibacillus senegalensis |
Non-coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
2154 |
Virgibacillus siamensis |
Unlikely Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1438 |
Vitreoscilla massiliensis |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
2225 |
Vitreoscilla stercoraria |
Rare Coloniser |
Proteobacteria | Betaproteobacteria | Neisseriales |
Neisseriaceae
|
2155 |
Weeksella virosa |
Rare Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Leuconostocaceae
|
1140 |
Weissella cibaria |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Leuconostocaceae
|
1141 |
Weissella confusa |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Leuconostocaceae
|
1142 |
Weissella paramesenteroides |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Leuconostocaceae
|
1515 |
Weissella viridescens |
Minor Coloniser |
Firmicutes | Bacilli | Lactobacillales |
Lactobacillaceae
|
1727 |
Weizmannia coagulans |
Rare Coloniser |
Firmicutes | Bacilli | Bacillales |
Bacillaceae
|
1728 |
Winkia neuii |
Rare Coloniser |
Actinobacteria | Actinomycetia | Actinomycetales |
Actinomycetaceae
|
2358 |
Wolinella succinogenes |
Rare Coloniser |
Proteobacteria | Epsilonproteobacteria | Campylobacterales |
Helicobacteraceae
|
1439 |
Xanthomonas massiliensis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Xanthomonadales |
Xanthomonadaceae
|
3030 |
Xylanimonas cellulosilytica |
Rare Coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Promicromonosporaceae
|
2558 |
Yangia pacifica |
Non-coloniser |
Proteobacteria | Alphaproteobacteria | Rhodobacterales |
Roseobacteraceae
|
1440 |
Yersinia aldovae |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1143 |
Yersinia aleksiciae |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
2241 |
Yersinia alsatica |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
2239 |
Yersinia artesiana |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1144 |
Yersinia bercovieri |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1145 |
Yersinia enterocolitica subsp. enterocolitica |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1146 |
Yersinia frederiksenii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
2156 |
Yersinia intermedia |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
2157 |
Yersinia kristensenii subsp. kristensenii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1147 |
Yersinia kristensenii subsp. rochesterensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1443 |
Yersinia massiliensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1444 |
Yersinia mollaretii |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
2243 |
Yersinia occitanica |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
2604 |
Yersinia pestis |
Non-coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
2240 |
Yersinia proxima |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1148 |
Yersinia pseudotuberculosis |
Unlikely Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1149 |
Yersinia rohdei |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
2242 |
Yersinia vastinensis |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Yersiniaceae
|
1150 |
Yokenella regensburgei |
Rare Coloniser |
Proteobacteria | Gammaproteobacteria | Enterobacterales |
Enterobacteriaceae
|
1151 |
Yonghaparkia alkaliphila |
Non-coloniser |
Actinobacteria | Actinomycetia | Micrococcales |
Microbacteriaceae
|
2962 |
Zunongwangia profunda |
Non-coloniser |
Bacteroidetes | Flavobacteriia | Flavobacteriales |
Flavobacteriaceae
|