Pu•biome

FILTERS

Coloniser

Gram Stain

Oxygen tolerance

Total 2651

Current 2651

Bacteria	Phylum	Coloniser	Gram	Cata	Oxid	Urea	ArDH	CbAh	Coag	DNA	Fibr	γ-GT	GluD	G6P+	HSNu	Haem	Hyal	LysD	OrnD
Abiotrophia defectiva	Firmicutes	Minor	+	neg	neg	neg	neg						neg
Absiella argi	Firmicutes	Rare	+			neg								+
Absiella innocuum	Firmicutes	Moderate
Absiella tortuosum	Firmicutes	Rare	+	neg
Acetanaerobacterium elongatum	Firmicutes	Rare	+	neg	neg	neg	+
Acetatifactor muris	Firmicutes	Rare	+			neg
Acetitomaculum ruminis	Firmicutes	Rare	+	neg
Acetivibrio cellulolyticus	Firmicutes	Rare	neg	neg		neg
Acetivibrio clariflavus	Firmicutes	Unlikely	vr			neg	neg						neg
Acetivibrio ethanolgignens	Firmicutes	Minor	neg
Acetivibrio saccincola	Firmicutes	Unlikely	+	neg														neg	neg
Acetivibrio thermocellus	Firmicutes	Unlikely	neg
Acetoanaerobium sticklandii	Firmicutes	Rare	+
Acetobacter pasteurianus	Proteobacteria	Unlikely	neg	d(w)	neg
Acetobacterium woodii	Firmicutes	Rare	+	neg
Acetomicrobium hydrogeniformans	Synergistetes	Unlikely	neg	neg	neg
Achromobacter denitrificans	Proteobacteria	Unlikely	neg	+	+	neg	neg			neg								neg	neg
Achromobacter insuavis	Proteobacteria	Unlikely	neg		+
Achromobacter spanius	Proteobacteria	Unlikely	neg	+	+	d	neg			neg								neg	neg
Achromobacter xylosoxidans	Proteobacteria	Rare	neg	+	+	neg	neg			neg								neg	neg
Acidaminococcus fermentans	Firmicutes	Widespread	neg	neg	neg	neg	neg						neg
Acidaminococcus intestini	Firmicutes	Moderate	neg	neg	neg	neg	neg						neg
Acidaminococcus massiliensis	Firmicutes	Rare	neg	neg	neg
Acidaminococcus provencensis	Firmicutes	Rare	neg	neg	neg
Acidaminococcus timonensis	Firmicutes	Rare	neg	neg	neg
Acidipropionibacterium acidipropionici	Actinobacteria	Rare	+	neg
Acidipropionibacterium jensenii	Actinobacteria	Rare	+	vr
Acidisarcina polymorpha	Acidobacteria	Rare	neg	neg		neg	neg
Acidovorax facilis	Proteobacteria	Rare	neg	+	+	d	neg											neg	neg
Acidovorax sp. strain KKS102	Proteobacteria	Rare	neg	+	+
Acidovorax temperans	Proteobacteria	Rare	neg	d(+)	+	d	neg											neg	neg
Acidovorax wautersii	Proteobacteria	Rare	neg	+	+	+	neg											neg	neg
Acinetobacter baumannii	Proteobacteria	Unlikely	neg	+	neg	neg	neg					+						neg	neg
Acinetobacter bereziniae	Proteobacteria	Unlikely	neg	+	neg
Acinetobacter calcoaceticus	Proteobacteria	Rare	neg	+	neg	neg	neg					+						neg	neg
Acinetobacter guillouiae	Proteobacteria	Rare	neg	+	neg
Acinetobacter haemolyticus	Proteobacteria	Unlikely	neg	+	neg	neg	neg					neg
Acinetobacter idrijaensis	Proteobacteria	Rare
Acinetobacter johnsonii	Proteobacteria	Rare	neg		neg	neg	neg					neg						neg	neg
Acinetobacter junii	Proteobacteria	Rare	neg		neg	neg	neg					neg
Acinetobacter lwoffii	Proteobacteria	Unlikely	neg	+	neg	+	neg			neg		neg						neg	neg
Acinetobacter parvus	Proteobacteria	Unlikely	neg		neg
Acinetobacter pittii	Proteobacteria	Unlikely	neg	+	neg	neg	neg											neg	neg
Acinetobacter radioresistens	Proteobacteria	Rare	neg	+	neg	neg	neg											neg	neg
Acinetobacter schindleri	Proteobacteria	Unlikely	neg		neg
Acinetobacter septicus	Proteobacteria	Unlikely	neg	+	neg	neg	neg
Acinetobacter towneri	Proteobacteria	Unlikely	neg		neg
Acinetobacter ursingii	Proteobacteria	Unlikely	neg		neg
Acinetobacter variabilis	Proteobacteria	Unlikely	neg	+	neg
Actinobacillus capsulatus	Proteobacteria	Rare	neg	d(+)	d(+)	+	neg											neg	neg
Actinobacillus minor	Proteobacteria	Unlikely	neg	neg		+												neg	neg
Actinobacillus pleuropneumoniae	Proteobacteria	Rare	neg	d	d	+	neg					neg						neg	neg
Actinobacillus succinogenes	Proteobacteria	Rare	neg	+	+	neg												neg	neg
Actinobacillus ureae	Proteobacteria	Non	neg	+	+	+
Actinobaculum massiliense	Actinobacteria	Minor	+	neg	neg	neg	neg
Actinomyces bouchesdurhonensis	Actinobacteria	Unlikely	+	neg	neg	neg
Actinomyces canis	Actinobacteria	Non	+	+
Actinomyces dentalis	Actinobacteria	Non	+	neg			neg						neg
Actinomyces georgiae	Actinobacteria	Non	+	neg		neg
Actinomyces gerencseriae	Actinobacteria	Unlikely	+	neg		neg
Actinomyces graevenitzii	Actinobacteria	Minor	+	neg		neg	neg					neg	neg						neg
Actinomyces ihuae	Actinobacteria	Rare	+	neg	neg	neg
Actinomyces israelii	Actinobacteria	Non	+	neg
Actinomyces johnsonii	Actinobacteria	Rare	+	d		d	neg						neg
Actinomyces marseillensis	Actinobacteria	Rare	+	neg	neg	+
Actinomyces massiliensis	Actinobacteria	Rare	+	neg	neg	neg	neg						neg
Actinomyces mediterranea	Actinobacteria	Rare	+	neg	neg
Actinomyces minihominis	Actinobacteria	Rare	+	neg	neg
Actinomyces naeslundii	Actinobacteria	Minor	+	neg		neg	neg					neg	neg	neg					neg
Actinomyces oris	Actinobacteria	Rare	+	vr		neg	neg						neg	neg
Actinomyces pacaensis	Actinobacteria	Rare	+	+	neg
Actinomyces polynesiensis	Actinobacteria	Rare	+	+	neg
Actinomyces provencensis	Actinobacteria	Rare	+	+	neg
Actinomyces sp. ph3	Actinobacteria	Rare	+
Actinomyces timonensis	Actinobacteria	Rare	+	neg	neg	neg	neg						neg	neg
Actinomyces urogenitalis	Actinobacteria	Rare	+	neg		neg	neg						neg
Actinomyces viscosus	Actinobacteria	Minor	+	+		neg	neg						neg
Actinosynnema mirum	Actinobacteria	Non	+
Actinotignum schaalii	Actinobacteria	Rare	+	neg		neg	neg
Acutalibacter muris	Firmicutes	Rare	+
Acutalibacter timonensis	Firmicutes	Minor
Adhaeribacter aquaticus	Bacteroidetes	Unlikely	neg	+	+
Adlercreutzia caecimuris	Actinobacteria	Rare	+				+						+
Adlercreutzia equolifaciens	Actinobacteria	Moderate	+				+
Adlercreutzia equolifaciens subsp. celatus	Actinobacteria	Rare	+	neg
Adlercreutzia hattorii	Actinobacteria	Rare	+	neg		neg	w
Adlercreutzia mucosicola	Actinobacteria	Rare	+	neg	neg		+		neg
Adlercreutzia rubneri	Actinobacteria	Rare	+	neg	neg	neg	+						neg
Aeribacillus pallidus	Firmicutes	Unlikely	+	+	+
Aerococcus vaginalis	Firmicutes	Non	+			neg
Aerococcus viridans	Firmicutes	Rare	+	neg	neg	neg							neg						neg
Aeromicrobium massiliense	Actinobacteria	Rare	+	+	neg	neg
Aeromicrobium tamlense	Actinobacteria	Rare	+	+	neg		neg											neg	neg
Aeromonas allosaccharophila	Proteobacteria	Rare	neg	+	+	neg	d											+	d
Aeromonas bestiarum	Proteobacteria	Rare	neg	+	+	neg	+											+	neg
Aeromonas caviae	Proteobacteria	Unlikely	neg	+	+	neg	+											neg	neg
Aeromonas dhakensis	Proteobacteria	Rare	neg	+	+	neg	+											+	neg
Aeromonas encheleia	Proteobacteria	Unlikely	neg	+	+	neg	+			+								neg	neg
Aeromonas enteropelogenes	Proteobacteria	Rare	neg		+	neg	+												neg
Aeromonas eucrenophila	Proteobacteria	Non	neg	+	+		+			+			neg
Aeromonas hydrophila	Proteobacteria	Unlikely	neg	+	+	neg	+											+	neg
Aeromonas hydrophila subsp. hydrophila	Proteobacteria	Unlikely	neg	+	+	neg	+											+	neg
Aeromonas jandaei	Proteobacteria	Rare	neg		+	neg	+						neg					+	neg
Aeromonas media	Proteobacteria	Rare	neg	+	+	neg	+											neg	neg
Aeromonas popoffii	Proteobacteria	Unlikely	neg	+	+	neg	+			+			neg					neg	neg
Aeromonas salmonicida	Proteobacteria	Unlikely	neg	+	+	neg	neg			d								+	neg
Aeromonas schubertii	Proteobacteria	Non	neg		+	neg	+			+								+	neg
Aeromonas sobria	Proteobacteria	Rare	neg	+	+	neg	+			+								neg	neg
Aeromonas taiwanensis	Proteobacteria	Non	neg	+	+	neg	+											neg	neg
Aeromonas tecta	Proteobacteria	Rare	neg	+	+	neg	+											vr	neg
Aeromonas trota	Proteobacteria	Rare	neg		+													+	neg
Aeromonas veronii	Proteobacteria	Rare	neg		+	neg	vr			+								+	+
Aestuariimicrobium kwangyangense	Actinobacteria	Rare	+	+	neg	neg
Afipia birgiae	Proteobacteria	Unlikely	neg	w	+	+	neg
Afipia broomeae	Proteobacteria	Rare	neg	+	+	+
Afipia lausannensis	Proteobacteria	Unlikely	neg	neg	+	neg	neg
Africanella massiliensis	Firmicutes	Rare	+	+	+
Agathobacter ruminis	Firmicutes	Rare	+	neg		neg
Agathobaculum butyriciproducens	Firmicutes	Moderate	+	neg	neg	neg
Agathobaculum desmolans	Firmicutes	Minor	+	neg	neg
Aggregatibacter actinomycetemcomitans	Proteobacteria	Rare	neg	+	+	neg	neg											neg	neg
Aggregatibacter aphrophilus	Proteobacteria	Minor	neg	neg	d(neg)	neg	neg					vr						neg	neg
Aggregatibacter segnis	Proteobacteria	Minor	neg	w	neg	neg										neg		neg	neg
Agrilactobacillus composti	Firmicutes	Unlikely	+	neg
Agrobacterium radiobacter	Proteobacteria	Unlikely	neg	+	+	+	+
Agrobacterium rhizogenes	Proteobacteria	Unlikely	neg	+		+	neg
Agrobacterium tumefaciens	Proteobacteria	Unlikely	neg	+	+	+
Agrococcus casei	Actinobacteria	Rare	+
Agrococcus jejuensis	Actinobacteria	Rare	+	+	neg	neg	neg
Agrococcus jenensis	Actinobacteria	Rare	+	+	neg
Agrococcus terreus	Actinobacteria	Unlikely	+	+	neg	neg	neg
Akkermansia glycaniphila	Verrucomicrobia	Rare	neg	+		neg
Akkermansia muciniphila	Verrucomicrobia	Widespread	neg			neg	neg						vr
Alcaligenes faecalis	Proteobacteria	Rare	neg	+	+	neg	neg											neg	neg
Alcaligenes faecalis subsp. faecalis	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Aliagarivorans marinus	Proteobacteria	Rare	neg	+	neg	neg	neg			neg								neg	neg
Aliarcobacter butzleri	Proteobacteria	Rare	neg	d(neg)	+	neg	neg			neg		+							+
Aliarcobacter cryaerophilus	Proteobacteria	Rare	neg	+	+	neg	neg			neg		neg	neg					neg	neg
Aliarcobacter skirrowii	Proteobacteria	Rare	neg	+	+	neg				+
Alicyclobacillus acidocaldarius	Firmicutes	Rare	+	+	neg
Aliiruegeria sabulilitoris	Proteobacteria	Unlikely	neg	+	+
Alistipes communis	Bacteroidetes	Rare	neg	neg		neg
Alistipes dispar	Bacteroidetes	Rare	neg	neg
Alistipes finegoldii	Bacteroidetes	Moderate	neg	neg		neg	neg						neg
Alistipes ihumii	Bacteroidetes	Moderate	neg	neg	+	neg	neg						w	neg
Alistipes indistinctus	Bacteroidetes	Moderate	neg	+	neg	neg	neg						neg
Alistipes inops	Bacteroidetes	Rare	neg	neg	neg	neg							+
Alistipes marseilloanorexicus	Bacteroidetes	Rare	neg
Alistipes massiliensis	Bacteroidetes	Rare	neg
Alistipes megaguti	Bacteroidetes	Rare	neg	neg	neg	neg
Alistipes montrealensis	Bacteroidetes	Rare	neg	+	neg	neg							+
Alistipes obesi	Bacteroidetes	Moderate	neg	+	neg	neg	neg							neg
Alistipes onderdonkii	Bacteroidetes	Moderate	neg	neg		neg	d						neg
Alistipes onderdonkii subsp. vulgaris	Bacteroidetes	Rare	neg	vr		neg
Alistipes provencensis	Bacteroidetes	Rare	neg	+	neg	neg
Alistipes putredinis	Bacteroidetes	Widespread	neg	+		neg	neg				+		vr
Alistipes senegalensis	Bacteroidetes	Moderate	neg	+	neg	neg	neg						vr
Alistipes shahii	Bacteroidetes	Widespread	neg	neg		neg	neg						neg
Alistipes timonensis	Bacteroidetes	Moderate	neg	+	neg								+
Alkalibacillus halophilus	Firmicutes	Unlikely	+	+	neg
Alkalihalobacillus alcalophilus	Firmicutes	Unlikely	+	+	+
Alkalihalobacillus gibsonii	Firmicutes	Rare	+
Alkalihalobacillus halodurans	Firmicutes	Rare	+		neg	neg	neg											neg	neg
Alkalihalobacillus oshimensis	Firmicutes	Unlikely	+	+	+
Alkaliphilus metalliredigens	Firmicutes	Rare	+
Alkaliphilus oremlandii	Firmicutes	Non	+
Alkaliphilus transvaalensis	Firmicutes	Non	+
Alkanindiges illinoisensis	Proteobacteria	Non	vr	+
Allisonella histaminiformans	Firmicutes	Minor	neg	neg	neg
Allobaculum fili	Firmicutes	Rare	+			neg	neg						neg	neg
Allobaculum mucilyticum	Firmicutes	Rare	+			neg	neg						neg	neg
Alloprevotella rava	Bacteroidetes	Rare	neg	neg
Alloprevotella tannerae	Bacteroidetes	Minor	neg
Alloscardovia omnicolens	Actinobacteria	Minor	+	neg	neg	neg	neg						neg
Alteracholeplasma palmae	Tenericutes	Rare	unk
Alterileibacterium massiliense	Firmicutes	Rare	neg	neg	neg
Amaricoccus kaplicensis	Proteobacteria	Unlikely	neg		+	neg	neg												neg
Amedibacillus dolichus	Firmicutes	Minor	+			neg	+						+
Amedibacterium intestinale	Firmicutes	Rare	+	neg		neg	neg						neg
Aminipila butyrica	Firmicutes	Rare	+	neg	neg
Aminipila terrae	Firmicutes	Rare	+	neg	neg		+
Aminomonas paucivorans	Synergistetes	Rare	neg
Ammonifex degensii	Firmicutes	Non	neg
Amycolatopsis alba	Actinobacteria	Rare	+	+		+
Amycolatopsis mediterranei	Actinobacteria	Rare	+	+		+
Amycolatopsis thailandensis	Actinobacteria	Rare	+	+		+
Amycolatopsis vancoresmycina	Actinobacteria	Unlikely	+			+	+											+	+
Anaerobiospirillum succiniciproducens	Proteobacteria	Rare	neg	neg	neg	neg	neg						neg
Anaerobiospirillum thomasii	Proteobacteria	Rare	neg	neg	neg
Anaerobutyricum hallii	Firmicutes	Widespread	+	neg		neg
Anaerobutyricum soehngenii	Firmicutes	Rare	+	neg	neg
Anaerococcus hydrogenalis	Firmicutes	Rare	+	d(neg)		neg	neg		neg				neg
Anaerococcus jeddahensis	Firmicutes	Rare	+	neg		neg
Anaerococcus lactolyticus	Firmicutes	Rare	+			+	neg		neg
Anaerococcus marasmi	Firmicutes	Rare	+	+	neg
Anaerococcus mediterraneensis	Firmicutes	Rare	+	+	neg
Anaerococcus murdochii	Firmicutes	Rare	+	neg		neg	+		neg
Anaerococcus obesiensis	Firmicutes	Rare	+
Anaerococcus octavius	Firmicutes	Rare	+	vr		neg	neg		neg				neg
Anaerococcus prevotii	Firmicutes	Minor	+	+		+	neg		neg				neg
Anaerococcus provencensis	Firmicutes	Rare	+
Anaerococcus rubeinfantis	Firmicutes	Rare	+	+	neg	neg
Anaerococcus senegalensis	Firmicutes	Rare	+	+	neg	+	+						neg
Anaerococcus tetradius	Firmicutes	Rare	+			+	neg		neg
Anaerococcus vaginalis	Firmicutes	Minor	+	w		neg	+		neg				neg
Anaerocolumna aminovalerica	Firmicutes	Rare	+							+
Anaerocolumna cellulosilytica	Firmicutes	Rare	+		neg
Anaerocolumna chitinilytica	Firmicutes	Rare	+
Anaerocolumna sedimenticola	Firmicutes	Rare	+	neg	neg		neg						neg
Anaerocolumna xylanovorans	Firmicutes	Rare	+
Anaerofilum pentosovorans	Firmicutes	Rare	+	neg
Anaerofustis stercorihominis	Firmicutes	Minor	+	neg		neg	neg						neg
Anaeroglobus geminatus	Firmicutes	Minor	neg	neg
Anaeromassilibacillus senegalensis	Firmicutes	Rare	neg	neg	neg
Anaerorhabdus furcosa	Firmicutes	Rare	neg			neg								+
Anaerosalibacter bizertensis	Firmicutes	Rare	+
Anaerosalibacter massiliensis	Firmicutes	Rare	+	neg	neg	neg	+
Anaerosphaera massiliensis	Firmicutes	Rare	+	neg	neg	neg			neg
Anaerospora hongkongensis	Firmicutes	Rare	neg	neg	neg
Anaerostipes butyraticus	Firmicutes	Rare	+			neg	neg						neg
Anaerostipes caccae	Firmicutes	Moderate	+	neg	neg	neg	+
Anaerostipes coli	Firmicutes	Rare	+			neg	d						neg
Anaerostipes hadrus	Firmicutes	Moderate	+	neg		neg
Anaerostipes hominis	Firmicutes	Rare	vr
Anaerostipes rhamnosivorans	Firmicutes	Rare	vr	neg	neg
Anaerostipes rhamnosus	Firmicutes	Rare	+
Anaerotignum faecicola	Firmicutes	Rare	+			neg	neg						+
Anaerotignum lactatifermentans	Firmicutes	Moderate	neg	neg		neg
Anaerotignum neopropionicum	Firmicutes	Rare	neg
Anaerotignum propionicum	Firmicutes	Rare	+	neg
Anaerotruncus colihominis	Firmicutes	Moderate	+	neg		neg	neg						neg
Anaerotruncus massiliensis	Firmicutes	Rare	neg	+	neg	neg	+
Anaerotruncus rubiinfantis	Firmicutes	Moderate	+
Anaerovorax odorimutans	Firmicutes	Rare	vr	neg
Ancylobacter polymorphus	Proteobacteria	Rare	neg	+	+	+	neg			neg
Aneurinibacillus aneurinilyticus	Firmicutes	Rare	+	w	+	neg	neg											neg
Aneurinibacillus migulanus	Firmicutes	Rare	+	+	+
Angelakisella massiliensis	Firmicutes	Rare	neg	neg	neg
Anoxybacillus flavithermus	Firmicutes	Non	+	+	+		+											+	neg
Anoxybacillus gonensis	Firmicutes	Unlikely	+	w	+
Anoxynatronum sibiricum	Firmicutes	Rare	+	+
Anseongella ginsenosidimutans	Bacteroidetes	Unlikely	neg			neg	neg
Aquabacterium citratiphilum	Proteobacteria	Rare	neg	neg	+
Aquabacterium commune	Proteobacteria	Rare	neg	neg	+
Aquabacterium parvum	Proteobacteria	Rare	neg	neg	+
Aquamicrobium lusatiense	Proteobacteria	Unlikely	neg	+	+
Aquincola tertiaricarbonis	Proteobacteria	Non	neg	w	+	neg	neg
Arabia massiliensis	Actinobacteria	Rare	neg	+	neg
Arachnia propionica	Actinobacteria	Rare	+
Arcanobacterium haemolyticum	Actinobacteria	Rare	+	neg		neg	neg			+			neg
Arthrobacter agilis	Actinobacteria	Non	+	+	+	neg	neg			d								neg	neg
Arthrobacter castelli	Actinobacteria	Rare	+	+	neg	+
Arthrobacter citreus	Actinobacteria	Unlikely	vr	+
Arthrobacter gandavensis	Actinobacteria	Unlikely	+	+		+
Arthrobacter globiformis	Actinobacteria	Unlikely	+			neg
Arthrobacter koreensis	Actinobacteria	Unlikely	+	+		neg
Arthrobacter luteolus	Actinobacteria	Unlikely	+	+		neg				+
Arthrobacter parietis	Actinobacteria	Non	+	+	neg	d
Arthrobacter pigmenti	Actinobacteria	Non	+	+	neg	neg
Arthrobacter russicus	Actinobacteria	Unlikely	+			neg
Asaccharospora irregularis	Firmicutes	Rare	+	neg		neg
Asticcacaulis biprosthecium	Proteobacteria	Unlikely	neg
Asticcacaulis excentricus	Proteobacteria	Unlikely	neg
Atlantibacter hermannii	Proteobacteria	Rare	neg		neg	neg	neg			neg								d(w)	+
Atopobium minutum	Actinobacteria	Minor	+			neg	+			neg			neg
Atopostipes suicloacalis	Firmicutes	Unlikely	+	neg		neg	neg						neg	+
Aureimonas altamirensis	Proteobacteria	Unlikely	neg	+	+	+	neg
Aureimonas ureilytica	Proteobacteria	Unlikely	neg	+	+	+	neg
Averyella dalhousiensis	Proteobacteria	Rare	neg		neg		neg			neg								+	+
Azoarcus pumilus	Proteobacteria	Rare	neg			+	neg
Azospirillum lipoferum	Proteobacteria	Rare	neg	d	+	+
Azotobacter vinelandii	Proteobacteria	Non	neg
Bacilliculturomica massiliensis	Firmicutes	Rare	+	neg	neg
Bacillus altitudinis	Firmicutes	Rare	+	+	+													+
Bacillus amyloliquefaciens	Firmicutes	Rare	+		neg	neg	neg			d(neg)								neg	neg
Bacillus andreraoultii	Firmicutes	Rare	+	+	neg	neg	+
Bacillus aneurinolyticus	Firmicutes	Rare	+	w	+
Bacillus anthracis	Firmicutes	Non	+	+		neg	neg											neg	neg
Bacillus atrophaeus	Firmicutes	Rare	+	+	neg	neg	neg											neg	neg
Bacillus badius DSM 23T	Firmicutes	Rare	+	+	+	neg	neg
Bacillus badius DSM 5610	Firmicutes	Rare	+	+	+	neg	neg
Bacillus baekryungensis	Firmicutes	Non	+	+	neg
Bacillus benzoevorans	Firmicutes	Rare	+	d	neg		neg
Bacillus caccae	Firmicutes	Rare	+
Bacillus cereus	Firmicutes	Minor	+	+	neg	neg	vr											neg	neg
Bacillus circulans	Firmicutes	Rare	+	+	neg	neg	neg											neg	neg
Bacillus clausii	Firmicutes	Rare	+		neg	neg	neg											neg	neg
Bacillus cytotoxicus	Firmicutes	Rare	+	+		neg	+											neg	neg
Bacillus dakarensis	Firmicutes	Rare	+	+	+
Bacillus endophyticus	Firmicutes	Unlikely	+	+	+		neg
Bacillus firmus	Firmicutes	Rare	+	vr	neg	neg	neg											neg	neg
Bacillus fordii	Firmicutes	Rare	neg	+	+													neg	neg
Bacillus halotolerans	Firmicutes	Rare	+	+	neg		+											+	+
Bacillus idriensis	Firmicutes	Rare	+	+	neg	neg	neg											neg	neg
Bacillus infantis	Firmicutes	Rare	+	+	neg
Bacillus kwashiorkori	Firmicutes	Rare	+	+	+
Bacillus licheniformis	Firmicutes	Minor	+	+	d	neg	vr											neg	neg
Bacillus marasmi	Firmicutes	Rare	+	neg	neg
Bacillus massilioanorexius	Firmicutes	Rare	+	+	+	neg
Bacillus massiliogabonensis	Firmicutes	Unlikely	neg	+	neg
Bacillus massilionigeriensis	Firmicutes	Rare	+	+	neg	neg
Bacillus mediterraneensis	Firmicutes	Rare	+	neg	neg	neg	neg
Bacillus methanolicus	Firmicutes	Non	+	+	+
Bacillus mojavensis	Firmicutes	Rare	+	+	+													neg	neg
Bacillus mycoides	Firmicutes	Rare	+	+	+	neg	neg											neg	neg
Bacillus niameyensis	Firmicutes	Rare	+	+	neg	neg
Bacillus pakistanensis	Firmicutes	Rare	+	+	neg	neg	neg											neg	neg
Bacillus phocaeensis	Firmicutes	Rare	+	+	neg	neg	neg
Bacillus pseudofirmus	Firmicutes	Rare	+
Bacillus pseudomycoides	Firmicutes	Unlikely	+	+	neg
Bacillus pumilus	Firmicutes	Rare	+	+	vr	neg	neg											neg	neg
Bacillus rubiinfantis	Firmicutes	Rare	+	+	neg
Bacillus sinesaloumensis	Firmicutes	Unlikely	+	+	+
Bacillus siralis	Firmicutes	Rare	+	+	+	neg	vr											neg	neg
Bacillus smithii	Firmicutes	Rare	+		+	neg	neg											neg	neg
Bacillus sonorensis	Firmicutes	Rare	+	+
Bacillus subtilis	Firmicutes	Minor	+	+	vr		neg											neg	neg
Bacillus testis	Firmicutes	Rare	+	+	neg
Bacillus thuringiensis	Firmicutes	Rare	+	+	neg	neg	vr											vr	neg
Bacillus timonensis	Firmicutes	Rare	neg	neg	+
Bacillus tuaregi	Firmicutes	Rare	+	neg	neg	neg	neg
Bacillus vallismortis	Firmicutes	Rare	+	+	+	neg	neg											neg	neg
Bacillus velezensis Variant polyfermenticus	Firmicutes	Rare	+	+	+	neg	neg											neg	neg
Bacillus wiedmannii	Firmicutes	Rare	+	+		neg	neg											neg	neg
Bacteroides acidifaciens	Bacteroidetes	Moderate	neg
Bacteroides bouchesdurhonensis	Bacteroidetes	Moderate	neg	+	neg
Bacteroides caccae	Bacteroidetes	Widespread	neg	neg		neg	vr						vr	+
Bacteroides caecimuris	Bacteroidetes	Rare	neg			neg	neg						neg
Bacteroides cellulosilyticus	Bacteroidetes	Moderate	neg	neg	neg	neg	neg						+
Bacteroides clarus	Bacteroidetes	Moderate	neg			neg	d						+
Bacteroides congonensis	Bacteroidetes	Moderate	neg	+	neg	neg
Bacteroides coprosuis	Bacteroidetes	Rare	neg	neg	neg	neg	neg
Bacteroides cutis	Bacteroidetes	Moderate	neg	neg	neg
Bacteroides eggerthii	Bacteroidetes	Widespread	neg	neg		neg	neg						+	+
Bacteroides faecalis	Bacteroidetes	Rare	neg	neg	neg	neg	neg						+
Bacteroides faecichinchillae	Bacteroidetes	Rare	neg	neg		neg	neg						+	neg
Bacteroides faecis	Bacteroidetes	Moderate	neg	neg	neg	neg	neg						+
Bacteroides finegoldii	Bacteroidetes	Widespread	neg			neg	neg						+
Bacteroides fluxus	Bacteroidetes	Moderate	neg	neg		neg	neg						neg
Bacteroides fragilis	Bacteroidetes	Widespread	neg	+		neg	vr						+	+
Bacteroides galacturonicus	Bacteroidetes	Rare	neg	neg		neg	neg						neg
Bacteroides gallinarum	Bacteroidetes	Moderate	neg	neg	neg		neg						+
Bacteroides graminisolvens	Bacteroidetes	Rare	neg	neg	neg	neg	neg						neg
Bacteroides helcogenes	Bacteroidetes	Rare	neg	neg		neg	neg						+
Bacteroides heparinolyticus	Bacteroidetes	Rare	neg	neg
Bacteroides ihuae	Bacteroidetes	Rare	neg	neg	neg	neg
Bacteroides ilei	Bacteroidetes	Minor	neg	neg	neg	neg
Bacteroides intestinalis	Bacteroidetes	Widespread	neg			neg	neg						+
Bacteroides luhongzhouii	Bacteroidetes	Rare	neg
Bacteroides luti	Bacteroidetes	Rare	neg	neg	neg	neg
Bacteroides mediterraneensis	Bacteroidetes	Moderate	neg	+	neg	neg
Bacteroides ndongoniae	Bacteroidetes	Minor	neg	+	neg	neg
Bacteroides neonati	Bacteroidetes	Minor	neg	+		neg
Bacteroides nordii	Bacteroidetes	Moderate	neg	neg		neg	neg						+
Bacteroides oleiciplenus	Bacteroidetes	Moderate	neg	+		neg	neg						+
Bacteroides ovatus	Bacteroidetes	Widespread	neg			neg	neg						+
Bacteroides pectinophilus	Bacteroidetes	Moderate	neg	neg
Bacteroides propionicifaciens	Bacteroidetes	Rare	neg	vr	neg	neg
Bacteroides pyogenes	Bacteroidetes	Minor	neg	neg		neg	neg						neg
Bacteroides reticulotermitis	Bacteroidetes	Rare	neg			neg	neg						neg
Bacteroides salyersiae	Bacteroidetes	Moderate	neg	neg		neg	vr						+
Bacteroides sp. Strain D8	Bacteroidetes	Rare	neg			neg	+						+
Bacteroides stercorirosoris	Bacteroidetes	Moderate	neg	neg		neg	neg						neg	neg
Bacteroides stercoris	Bacteroidetes	Widespread	neg	neg		neg	neg						+
Bacteroides thetaiotaomicron	Bacteroidetes	Widespread	neg			neg	neg						+
Bacteroides timonensis	Bacteroidetes	Rare	neg	+	neg	neg	+						+
Bacteroides togonis	Bacteroidetes	Minor	neg	neg	neg
Bacteroides uniformis	Bacteroidetes	Widespread	neg	neg		neg	neg						vr
Bacteroides xylanisolvens	Bacteroidetes	Widespread	neg			neg	neg						+
Bacteroides zhangwenhongi	Bacteroidetes	Rare	neg
Bacteroides zoogleoformans	Bacteroidetes	Rare	neg	neg		neg
Bariatricus massiliensis	Firmicutes	Minor	+	neg	neg
Barnesiella intestinihominis	Bacteroidetes	Moderate	neg	neg	neg	neg	neg						+
Barnesiella viscericola	Bacteroidetes	Rare	neg	neg		neg	d						+
Bartonella vinsonii	Proteobacteria	Non	neg	neg	neg	neg
Bavariicoccus seileri	Firmicutes	Rare	+	neg
Bdellovibrio bacteriovorus	Bdellovibrionota	Moderate	neg	+	+
Beduinella massiliensis	Firmicutes	Rare	neg	neg	neg
Beduini massiliensis	Firmicutes	Rare	neg	neg	neg	neg	+						neg
Beduinibacterium massiliense	Firmicutes	Rare	+	neg	neg
Belnapia soli	Proteobacteria	Rare	neg	+	neg	+	neg
Berryella intestinalis	Actinobacteria	Rare	+
Bhargavaea beijingensis	Firmicutes	Rare	+	+	+		+
Bhargavaea cecembensis	Firmicutes	Non	+	+	+	+	neg											neg	neg
Bifidobacterium adolescentis	Actinobacteria	Widespread	+	neg	neg	neg	neg						neg
Bifidobacterium aerophilum	Actinobacteria	Rare	+	neg	neg	neg	neg						neg	neg
Bifidobacterium angulatum	Actinobacteria	Moderate	+	neg	neg	neg	neg						neg
Bifidobacterium animalis	Actinobacteria	Moderate	+	neg	neg	neg							neg	+
Bifidobacterium animalis subsp. lactis	Actinobacteria	Rare	+		neg
Bifidobacterium asteroides	Actinobacteria	Rare	+	+		d
Bifidobacterium avesanii	Actinobacteria	Rare	+	neg	neg
Bifidobacterium biavatii	Actinobacteria	Rare	+		neg
Bifidobacterium bifidum	Actinobacteria	Widespread	+	neg	neg	neg	neg						neg
Bifidobacterium boum	Actinobacteria	Rare	+	neg	neg
Bifidobacterium breve	Actinobacteria	Widespread	+	neg	neg	neg	neg						neg
Bifidobacterium callitrichidarum	Actinobacteria	Rare	+	neg	neg	neg	+						neg
Bifidobacterium catenulatum	Actinobacteria	Moderate	+	neg	neg	neg	neg						neg
Bifidobacterium catenulatum subsp. kashiwanohense	Actinobacteria	Rare	+	neg	neg
Bifidobacterium choerinum	Actinobacteria	Rare	+			d
Bifidobacterium coryneforme	Actinobacteria	Rare	+		neg
Bifidobacterium cuniculi	Actinobacteria	Rare	+	neg
Bifidobacterium dentium	Actinobacteria	Moderate	+	neg	neg	neg	neg						neg
Bifidobacterium eulemuris	Actinobacteria	Rare	+	neg	neg	neg	neg
Bifidobacterium faecale	Actinobacteria	Rare	+	neg	neg
Bifidobacterium gallicum	Actinobacteria	Rare	+	neg	neg	neg	neg						neg
Bifidobacterium imperatoris	Actinobacteria	Rare	+				+						+
Bifidobacterium indicum	Actinobacteria	Rare	+		neg
Bifidobacterium lemurum	Actinobacteria	Rare	+	neg	neg
Bifidobacterium longum subsp. infantis	Actinobacteria	Moderate	+	neg	neg	neg	neg						neg
Bifidobacterium longum subsp. longum	Actinobacteria	Widespread	+	neg	neg	neg	neg						neg
Bifidobacterium longum subsp. suis	Actinobacteria	Rare	+			d(+)
Bifidobacterium merycicum	Actinobacteria	Rare	+	neg
Bifidobacterium minimum	Actinobacteria	Rare	+	neg
Bifidobacterium mongoliense	Actinobacteria	Unlikely	+	neg	neg
Bifidobacterium moukalabense	Actinobacteria	Rare	+			neg	neg						neg
Bifidobacterium myosotis	Actinobacteria	Rare	+	neg	neg	+	+
Bifidobacterium pseudocatenulatum	Actinobacteria	Widespread	+	neg	neg	neg	neg						neg
Bifidobacterium pseudolongum	Actinobacteria	Minor	+		neg
Bifidobacterium pseudolongum subsp. globosum	Actinobacteria	Rare	+	neg	neg
Bifidobacterium pullorum subsp. gallinarum	Actinobacteria	Rare	+		neg
Bifidobacterium pullorum subsp. saeculare	Actinobacteria	Rare	+		neg
Bifidobacterium ramosum	Actinobacteria	Rare	+	neg	neg	neg	+						neg
Bifidobacterium reuteri	Actinobacteria	Rare	+	neg
Bifidobacterium ruminantium	Actinobacteria	Minor	+	neg	neg
Bifidobacterium saguini	Actinobacteria	Rare	+
Bifidobacterium scardovii	Actinobacteria	Minor	+	neg	neg	d(neg)	neg						neg
Bifidobacterium stellenboschense	Actinobacteria	Rare	+	neg
Bifidobacterium subtile	Actinobacteria	Rare	+	neg
Bifidobacterium thermacidophilum	Actinobacteria	Rare	+	neg	neg
Bifidobacterium thermophilum	Actinobacteria	Rare	+		neg
Bifissio spartinae	Bacteroidetes	Rare	neg
Bilophila wadsworthia	Desulfobacterota	Widespread	neg	+		d	vr						neg
Bittarella massiliensis	Firmicutes	Moderate	neg	neg	neg
Blastococcus massiliensis	Actinobacteria	Rare	+	+	neg
Blastomonas natatoria	Proteobacteria	Unlikely	neg	+	+	neg
Blautia brookingsii	Firmicutes	Rare	+
Blautia caecimuris	Firmicutes	Rare	+			neg	neg						neg	neg
Blautia coccoides	Firmicutes	Minor	+	neg		neg	neg						neg
Blautia faecicola	Firmicutes	Rare	+	neg	neg								neg
Blautia faecis	Firmicutes	Rare	+	neg	neg	neg	+						neg
Blautia glucerasea	Firmicutes	Rare	+			neg	neg						neg
Blautia hansenii	Firmicutes	Moderate	+	neg		neg	neg						neg
Blautia hominis	Firmicutes	Rare	+	neg	neg	neg	neg						neg
Blautia hydrogenotrophica	Firmicutes	Moderate	+	neg	neg	+	vr						neg
Blautia intestinalis	Firmicutes	Rare	+
Blautia liquoris	Firmicutes	Rare	+
Blautia luti	Firmicutes	Minor	+	neg		neg							neg
Blautia marasmi	Firmicutes	Rare	+
Blautia massiliensis	Firmicutes	Moderate	neg	neg	neg	neg
Blautia obeum	Firmicutes	Widespread	+			neg	neg						neg
Blautia phocaeensis	Firmicutes	Rare	+	neg	neg
Blautia producta	Firmicutes	Widespread	+	neg		neg	neg						neg						+
Blautia provencensis	Firmicutes	Rare	+
Blautia pseudococcoides	Firmicutes	Rare	+
Blautia schinkii	Firmicutes	Rare	+	neg	neg
Blautia stercoris	Firmicutes	Minor	+	neg	neg	neg	+						neg
Blautia wexlerae	Firmicutes	Moderate	+	neg		vr	neg						neg
Bordetella bronchiseptica	Proteobacteria	Non	neg	+	+	+												neg
Bordetella hinzii	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Bordetella trematum	Proteobacteria	Non	neg	+	neg	neg	neg											neg	neg
Bosea massiliensis	Proteobacteria	Rare	neg	+	+	+	neg
Brachybacterium conglomeratum	Actinobacteria	Rare	+	+	neg	+
Brachybacterium faecium	Actinobacteria	Unlikely	+	+	neg					neg
Brachybacterium ginsengisoli	Actinobacteria	Unlikely	+	+	neg	neg	neg
Brachybacterium massiliense	Actinobacteria	Rare	+	+	neg
Brachybacterium muris	Actinobacteria	Rare	+	+	neg	neg
Brachybacterium paraconglomeratum	Actinobacteria	Rare	+	+	neg	+
Brachymonas chironomi	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Brachyspira aalborgi	Spirochaetes	Rare	neg	neg	neg
Brachyspira hyodysenteriae	Spirochaetes	Rare	neg	+
Brachyspira pilosicoli	Spirochaetes	Unlikely	neg			neg	neg						neg
Bradyrhizobium denitrificans	Proteobacteria	Rare	neg	+	+	vr	neg
Bradyrhizobium elkanii	Proteobacteria	Rare	neg		+	vr	neg
Bradyrhizobium ganzhouense	Proteobacteria	Unlikely	neg	+	+	+
Bradyrhizobium icense	Proteobacteria	Unlikely	neg
Bradyrhizobium japonicum	Proteobacteria	Rare	neg		+	+	neg
Bradyrhizobium neotropicale	Proteobacteria	Rare	neg	+	+	+	+
Brassicibacter mesophilus	Firmicutes	Rare	neg	neg	neg
Brenneria populi Li et al. 2015	Proteobacteria	Rare	neg	+	neg	neg	+											neg	neg
Brevibacillus agri	Firmicutes	Unlikely	+	+	neg	neg	neg					neg						neg	neg
Brevibacillus borstelensis	Firmicutes	Rare	+	+	neg	neg	neg											neg	neg
Brevibacillus brevis	Firmicutes	Rare	vr	+	+	neg
Brevibacillus centrosporus	Firmicutes	Unlikely	+	+	neg	neg	neg											neg	neg
Brevibacillus choshinensis	Firmicutes	Rare	+	+	+	neg
Brevibacillus formosus	Firmicutes	Unlikely	+	+	neg
Brevibacillus laterosporus	Firmicutes	Rare	vr	+		neg
Brevibacillus massiliensis	Firmicutes	Rare	+	+	+	neg	neg
Brevibacillus parabrevis	Firmicutes	Unlikely	vr	+	+	neg
Brevibacillus thermoruber	Firmicutes	Non	+	neg
Brevibacterium aurantiacum	Actinobacteria	Unlikely	+	+	+
Brevibacterium casei	Actinobacteria	Rare	+	+	neg	neg	neg											neg	neg
Brevibacterium celere	Actinobacteria	Rare	+	+	+
Brevibacterium epidermidis	Actinobacteria	Rare	+	+	neg	neg	neg											neg	neg
Brevibacterium ihuae	Actinobacteria	Rare	+	+	neg
Brevibacterium iodinum	Actinobacteria	Unlikely	vr	+	+	neg	neg											neg	neg
Brevibacterium linens	Actinobacteria	Unlikely	+	+	w
Brevibacterium luteolum	Actinobacteria	Rare	+	+		neg	neg											neg	neg
Brevibacterium mcbrellneri	Actinobacteria	Unlikely	+	+	neg	neg												neg	neg
Brevibacterium otitidis	Actinobacteria	Non	+	+
Brevibacterium paucivorans	Actinobacteria	Rare	+	+		neg
Brevibacterium pityocampae	Actinobacteria	Rare	+	+	neg	neg	neg											neg	neg
Brevibacterium ravenspurgense	Actinobacteria	Rare	+	+	neg	neg	neg						neg
Brevibacterium samyangense	Actinobacteria	Rare	+	+	neg	neg
Brevibacterium sanguinis	Actinobacteria	Rare	+	+	neg	neg
Brevibacterium senegalense	Actinobacteria	Rare	+	+	neg	neg
Brevundimonas aurantiaca	Proteobacteria	Rare	neg	+
Brevundimonas bacteroides	Proteobacteria	Rare	neg	+
Brevundimonas bullata	Proteobacteria	Rare	neg	vr	+	+
Brevundimonas diminuta	Proteobacteria	Rare	neg	+	+	neg	neg											neg	neg
Brevundimonas intermedia	Proteobacteria	Rare	neg	+
Brevundimonas nasdae	Proteobacteria	Rare	neg	+	+	neg	neg											neg
Brevundimonas terrae	Proteobacteria	Rare	neg	+	+	neg	neg											neg	neg
Brevundimonas vesicularis	Proteobacteria	Rare	neg	+	neg	neg	neg											neg	neg
Brochothrix thermosphacta	Firmicutes	Unlikely	+	+	neg	neg	neg			neg
Brucella anthropi	Proteobacteria	Unlikely	neg	+	+	+	neg											neg	neg
Brucella cytisi	Proteobacteria	Rare	neg	+	+	neg	neg											neg	neg
Brucella melitensis	Proteobacteria	Non	neg	+
Brucella tritici	Proteobacteria	Unlikely	neg	+	+	+	neg											neg	neg
Buchnera aphidicola	Proteobacteria	Non	neg
Bulleidia extructa	Firmicutes	Rare	+	neg
Burkholderia arboris	Proteobacteria	Rare	neg		+	neg	neg											d(+)	+
Burkholderia cepacia	Proteobacteria	Rare	neg	+	w	neg	neg											+	+
Burkholderia gladioli	Proteobacteria	Unlikely	neg	+	+	d(+)												neg	neg
Burkholderia mallei	Proteobacteria	Unlikely	neg		+		+
Burkholderia multivorans	Proteobacteria	Rare	neg	+	+	+	neg											neg	neg
Burkholderia pseudomallei	Proteobacteria	Unlikely	neg
Burkholderia pyrrocinia	Proteobacteria	Unlikely	neg	+	neg	neg	neg											+
Burkholderia vietnamiensis	Proteobacteria	Rare	neg	+	+	+	neg
Buttiauxella agrestis	Proteobacteria	Rare	neg	+	neg	neg				neg								neg	+
Butyribacter intestini	Firmicutes	Rare	+
Butyricicoccus faecihominis	Firmicutes	Rare	+			neg
Butyricicoccus porcorum	Firmicutes	Rare	+	neg		+
Butyricicoccus pullicaecorum	Firmicutes	Minor	+			neg
Butyricimonas faecalis	Bacteroidetes	Rare	neg	+		neg	+						+
Butyricimonas faecihominis	Bacteroidetes	Rare	neg	+		neg	neg						+
Butyricimonas paravirosa	Bacteroidetes	Rare	neg	+		neg							+
Butyricimonas phoceensis	Bacteroidetes	Rare	neg	+	neg	neg
Butyricimonas synergistica	Bacteroidetes	Minor	neg	neg		neg	neg						+
Butyricimonas virosa	Bacteroidetes	Moderate	neg	+		neg	neg						+
Butyrivibrio crossotus	Firmicutes	Widespread	neg	neg
Butyrivibrio fibrisolvens	Firmicutes	Minor	neg	neg		neg	neg						neg
Butyrivibrio hungatei	Firmicutes	Unlikely	neg	neg		neg
Butyrivibrio proteoclasticus	Firmicutes	Rare	+	neg
Caballeronia novacaledonica	Proteobacteria	Rare	neg	+	neg	+	+
Caecibacter massiliensis	Firmicutes	Rare
Caldibacillus thermoamylovorans	Firmicutes	Unlikely	+	+	neg	neg	vr											neg	neg
Caldicellulosiruptor diazotrophicus	Firmicutes	Non	+
Caldicoprobacter faecalis	Firmicutes	Unlikely	neg
Caloranaerobacter azorensis	Firmicutes	Non	neg
Campylobacter avium	Proteobacteria	Non	neg	w	+	neg						neg
Campylobacter coli	Proteobacteria	Unlikely	neg	+	+	neg	neg					d	neg
Campylobacter concisus	Proteobacteria	Minor	neg	neg	d	neg						neg						neg	neg
Campylobacter curvus	Proteobacteria	Rare	neg	neg	+	neg	neg					neg	neg					neg	neg
Campylobacter faecalis	Proteobacteria	Rare	neg
Campylobacter fetus subsp. fetus	Proteobacteria	Rare	neg	+	+	neg						neg
Campylobacter gracilis	Proteobacteria	Minor	neg	d(neg)	neg	neg	neg					neg	neg					neg	neg
Campylobacter hominis	Proteobacteria	Minor	neg	neg	+	neg						neg
Campylobacter hyointestinalis subsp. hyointestinalis	Proteobacteria	Unlikely	neg	+	+	neg						neg
Campylobacter jejuni subsp. doylei	Proteobacteria	Rare	neg	d(+)	+
Campylobacter jejuni subsp. jejuni	Proteobacteria	Unlikely	neg	+	+	neg							neg
Campylobacter lanienae	Proteobacteria	Rare	neg	+	+	neg				neg
Campylobacter lari subsp. concheus	Proteobacteria	Rare	neg	+	+
Campylobacter lari subsp. lari	Proteobacteria	Rare	neg	+	+	neg	neg			neg		+	neg						+
Campylobacter mucosalis	Proteobacteria	Rare	neg	neg	+					neg
Campylobacter peloridis	Proteobacteria	Rare	neg	+	+
Campylobacter rectus	Proteobacteria	Rare	neg	neg	neg	neg	neg					neg	neg					neg	neg
Campylobacter showae	Proteobacteria	Rare	neg	+	vr	neg						neg						neg	neg
Campylobacter sputorum	Proteobacteria	Non	neg	neg	+	neg				neg
Campylobacter troglodytis	Proteobacteria	Rare	neg	+	+	neg						neg
Campylobacter upsaliensis	Proteobacteria	Rare	neg	neg	+	neg	neg					neg	neg
Campylobacter ureolyticus	Proteobacteria	Minor	neg	d	+	+
Candidatus Babela massiliensis	Candidatus Dependentiae	Unlikely	neg
Candidatus Dorea massiliensis	Firmicutes	Rare	+
Candidatus Stoquefichus massiliensis	Firmicutes	Rare	+	+	+
Capnocytophaga canimorsus	Bacteroidetes	Unlikely	neg	+	+	neg	+											neg	neg
Capnocytophaga gingivalis	Bacteroidetes	Non	neg	neg	neg													neg	neg
Capnocytophaga granulosa	Bacteroidetes	Rare	neg	neg	neg	neg						+							neg
Capnocytophaga leadbetteri	Bacteroidetes	Rare	neg	neg	neg
Capnocytophaga ochracea	Bacteroidetes	Rare	neg	neg	neg	neg	neg					neg	neg					neg	neg
Capnocytophaga sputigena	Bacteroidetes	Rare	neg	neg	neg	neg	neg					vr						neg	neg
Capnocytophaga stomatis	Bacteroidetes	Unlikely	neg	+	+		+
Caproicibacter fermentans	Firmicutes	Rare	neg
Cardiobacterium hominis	Proteobacteria	Rare	neg	neg	+	neg						+							neg
Cardiobacterium valvarum	Proteobacteria	Rare	neg	neg	+	neg
Carnobacterium divergens	Firmicutes	Non	+	neg	neg	neg	+											neg	neg
Carnobacterium inhibens	Firmicutes	Rare	+	pseudo(+)	neg	neg	neg
Carnobacterium maltaromaticum	Firmicutes	Unlikely	+	neg	neg					+
Carnobacterium mobile	Firmicutes	Non	+	neg		neg	+											neg	neg
Casaltella massiliensis	Firmicutes	Rare	neg
Catenibacillus scindens	Firmicutes	Rare	+	neg	neg	neg	neg					neg	neg
Catenibacterium mitsuokai	Firmicutes	Moderate	+
Catenulispora acidiphila	Actinobacteria	Unlikely	+	+
Catonella morbi	Firmicutes	Rare	neg	neg
Caulobacter vibrioides	Proteobacteria	Unlikely	neg		+	neg	neg
Cedecea davisae	Proteobacteria	Rare	neg	+	neg	neg				neg								neg	+
Cedecea lapagei	Proteobacteria	Rare	neg	+	neg	neg												neg	neg
Cedecea neteri	Proteobacteria	Rare	neg		neg	neg	+			neg								neg	neg
Cellulomonas carbonis	Actinobacteria	Unlikely	+	+	neg	neg	neg
Cellulomonas composti	Actinobacteria	Rare	+	neg		neg				+
Cellulomonas denverensis	Actinobacteria	Rare	+	+		neg
Cellulomonas fimi	Actinobacteria	Rare	+	+		neg
Cellulomonas flavigena	Actinobacteria	Rare	+	+		neg
Cellulomonas hominis	Actinobacteria	Rare	+	+		neg
Cellulomonas massiliensis	Actinobacteria	Rare	+	+	+	neg	neg
Cellulomonas parahominis	Actinobacteria	Rare	+
Cellulomonas timonensis	Actinobacteria	Rare	+	+	neg
Cellulosilyticum lentocellum	Firmicutes	Rare	neg	neg		w
Cellulosilyticum ruminicola	Firmicutes	Rare	neg	neg		neg
Cellulosimicrobium cellulans	Actinobacteria	Rare	+	+		neg	neg												neg
Centipeda periodontii	Firmicutes	Rare	neg	neg	neg	neg
Cerasibacillus quisquiliarum	Firmicutes	Non	+	+	+
Cetobacterium somerae	Fusobacteria	Rare	neg	neg		d
Chelatococcus asaccharovorans	Proteobacteria	Unlikely	neg
Chitinophaga agri	Bacteroidetes	Unlikely	neg	+	neg	neg
Chlamydia trachomatis	Chlamydiae	Non	neg
Chloracidobacterium thermophilum	Acidobacteria	Non	neg
Christensenella hongkongensis	Firmicutes	Minor	+	+		neg	neg						+
Christensenella massiliensis	Firmicutes	Rare	neg	neg	neg
Christensenella minuta	Firmicutes	Minor	neg	neg	neg	neg	neg						+
Christensenella timonensis	Firmicutes	Minor	neg	neg	neg
Chromobacterium violaceum	Proteobacteria	Unlikely	neg	neg	+
Chromohalobacter japonicus	Proteobacteria	Unlikely	neg	+	neg	neg	neg											neg	+
Chromohalobacter salexigens	Proteobacteria	Unlikely	neg	+	neg													neg	neg
Chryseobacterium gallinarum	Bacteroidetes	Unlikely	neg	+	+	+	neg					+						neg	neg
Chryseobacterium gleum	Bacteroidetes	Unlikely	neg	+	+	d	neg			+								neg	neg
Chryseobacterium hominis	Bacteroidetes	Rare	neg		+	neg	neg					+						neg	neg
Chryseobacterium indologenes	Bacteroidetes	Rare	neg	+	+	neg	neg											neg	neg
Chryseobacterium oranimense	Bacteroidetes	Rare	neg	+	+	neg	neg			+								neg	neg
Chryseobacterium taklimakanense	Bacteroidetes	Rare	neg	+	+	neg	neg											neg	neg
Chryseobacterium viscerum	Bacteroidetes	Non	neg	+	+
Chryseomicrobium amylolyticum	Firmicutes	Rare	+	+	neg	neg
Citrobacter amalonaticus	Proteobacteria	Rare	neg	+	neg	+	+			neg								neg	+
Citrobacter braakii	Proteobacteria	Rare	neg	+	neg	d				neg								neg	d(+)
Citrobacter europaeus	Proteobacteria	Rare	neg	+	neg	neg
Citrobacter farmeri	Proteobacteria	Minor	neg	+	neg	d	+			neg								neg	+
Citrobacter freundii	Proteobacteria	Minor	neg	+	neg	d				neg								neg	neg
Citrobacter gillenii	Proteobacteria	Rare	neg	+	neg	neg	d			neg								neg	neg
Citrobacter intermedius	Proteobacteria	Unlikely	neg	+	neg
Citrobacter koseri	Proteobacteria	Minor	neg	+	neg	d	+			neg								neg	+
Citrobacter murliniae	Proteobacteria	Rare	neg	+	neg	+	w			neg								neg	neg
Citrobacter pasteurii	Proteobacteria	Rare	neg	neg	neg	+												neg	neg
Citrobacter portucalensis	Proteobacteria	Rare	neg	neg	neg	+
Citrobacter rodentium	Proteobacteria	Rare	neg			+	neg											neg	+
Citrobacter sedlakii	Proteobacteria	Rare	neg	+	neg	+	+			neg		+	neg					neg	+
Citrobacter werkmanii	Proteobacteria	Rare	neg	+	neg	neg	+			neg								neg	neg
Citrobacter youngae	Proteobacteria	Rare	neg	d(+)	neg	neg	w			neg								neg	neg
Citroniella saccharovorans	Firmicutes	Rare	+	neg	neg
Cloacibacillus evryensis	Synergistetes	Minor	neg
Cloacibacillus porcorum	Synergistetes	Rare	neg	neg			+						+
Cloacibacterium normanense	Bacteroidetes	Rare	neg	+	+	neg	w			+
Clostridioides difficile	Firmicutes	Widespread	+	neg	neg	neg	neg						neg				+
Clostridioides mangenotii	Firmicutes	Rare	+
Clostridium acetobutylicum	Firmicutes	Rare	+	neg		neg
Clostridium amazonense	Firmicutes	Rare	+	neg	neg	neg	+						neg
Clostridium amazonitimonense	Firmicutes	Rare	+	neg	neg	neg
Clostridium aminobutyricum	Firmicutes	Rare	+
Clostridium aminophilum	Firmicutes	Rare	+			neg
Clostridium amylolyticum	Firmicutes	Rare	+	neg	neg
Clostridium anorexicamassiliense	Firmicutes	Rare	+	+	neg
Clostridium argentinense	Firmicutes	Rare	+	neg		neg				neg
Clostridium aurantibutyricum	Firmicutes	Rare	+			neg
Clostridium autoethanogenum	Firmicutes	Rare	+
Clostridium baratii	Firmicutes	Minor	+	neg		neg
Clostridium beijerinckii	Firmicutes	Minor	+	neg		neg
Clostridium boliviensis	Firmicutes	Rare	+
Clostridium bornimense	Firmicutes	Rare	vr	+
Clostridium botulinum Gp I	Firmicutes	Unlikely	+			neg	neg						neg			+
Clostridium botulinum Gp II	Firmicutes	Unlikely	+
Clostridium botulinum Gp III	Firmicutes	Unlikely	+
Clostridium botulinum Gp IV	Firmicutes	Unlikely	+
Clostridium budayi	Firmicutes	Rare	+	neg
Clostridium butyricum	Firmicutes	Widespread	+	neg		neg	vr			+		neg	neg
Clostridium cadaveris	Firmicutes	Rare	+							+
Clostridium cagae	Firmicutes	Rare	+	+	neg
Clostridium carboxidivorans	Firmicutes	Rare	+	neg	neg	neg
Clostridium carnis	Firmicutes	Rare	+							+
Clostridium celatum	Firmicutes	Minor	+			+
Clostridium cellulosi	Firmicutes	Unlikely	neg	neg
Clostridium cellulovorans	Firmicutes	Rare	neg
Clostridium chartatabidum	Firmicutes	Rare	+			neg	neg						neg
Clostridium chauvoei	Firmicutes	Rare	+	+		neg	neg						neg				+
Clostridium cochlearium	Firmicutes	Minor	+
Clostridium cocleatum	Firmicutes	Rare	+	neg		neg							neg
Clostridium colicanis	Firmicutes	Rare	neg	neg			+						neg	neg
Clostridium colinum	Firmicutes	Rare	+	neg		neg
Clostridium combesii	Firmicutes	Rare	+
Clostridium culturomicium	Firmicutes	Rare	+	neg	neg
Clostridium dakarense	Firmicutes	Rare	+	neg	neg	neg	+
Clostridium diolis	Firmicutes	Rare	+
Clostridium disporicum	Firmicutes	Minor	+	neg
Clostridium drakei	Firmicutes	Unlikely	+
Clostridium estertheticum	Firmicutes	Unlikely	+
Clostridium fallax	Firmicutes	Rare	+							+
Clostridium felsineum	Firmicutes	Rare	+
Clostridium fessum	Firmicutes	Rare	+	neg		neg	neg						w
Clostridium gasigenes	Firmicutes	Unlikely	+
Clostridium haemolyticum	Firmicutes	Rare	+
Clostridium herbivorans	Firmicutes	Rare	+	neg	neg	neg
Clostridium hylemonae	Firmicutes	Minor	+
Clostridium ihumii	Firmicutes	Rare	+	neg	+	neg	+						+
Clostridium innocuum	Firmicutes	Widespread	+
Clostridium intestinale	Firmicutes	Rare	+	neg
Clostridium isatidis	Firmicutes	Unlikely	+	neg		neg
Clostridium jeddahense	Firmicutes	Rare	+	neg	neg	neg	neg						neg
Clostridium jeddahitimonense	Firmicutes	Rare	+	neg	neg
Clostridium kluyveri	Firmicutes	Unlikely	vr			+
Clostridium leptum	Firmicutes	Widespread	+			neg
Clostridium magnum	Firmicutes	Rare	neg
Clostridium malenominatum	Firmicutes	Rare	+
Clostridium manihotivorum	Firmicutes	Rare	+	neg
Clostridium massiliamazoniense	Firmicutes	Rare	+	neg	neg	neg
Clostridium massiliodielmoense	Firmicutes	Rare	+	neg	neg	neg
Clostridium mediterraneense	Firmicutes	Rare	+	neg	neg
Clostridium merdae	Firmicutes	Rare	+	neg	neg	neg
Clostridium metallolevans	Firmicutes	Rare	+
Clostridium methoxybenzovorans	Firmicutes	Rare	+
Clostridium methylpentosum	Firmicutes	Moderate	+
Clostridium minihomine	Firmicutes	Rare	+	neg	neg
Clostridium moniliforme	Firmicutes	Rare	+	neg
Clostridium neonatale	Firmicutes	Minor	+	neg	neg	neg
Clostridium niameyense	Firmicutes	Rare	+	neg	neg	neg
Clostridium nigeriense	Firmicutes	Rare	+	neg	+	neg
Clostridium nitritogenes	Firmicutes	Rare	+	neg
Clostridium novyi A	Firmicutes	Rare	+							d(+)							d(neg)
Clostridium oceanicum	Firmicutes	Rare	+							+
Clostridium paraputrificum	Firmicutes	Moderate	+			neg	neg						neg
Clostridium pasteurianum	Firmicutes	Rare	+							+
Clostridium perfringens	Firmicutes	Widespread	+			neg	vr						vr				+
Clostridium phoceensis	Firmicutes	Rare	neg	neg	neg	neg
Clostridium polyendosporum	Firmicutes	Rare	+			neg
Clostridium polynesiense	Firmicutes	Rare	+	neg	neg	neg	neg
Clostridium polysaccharolyticum	Firmicutes	Rare	neg	neg
Clostridium populeti	Firmicutes	Rare	neg	neg
Clostridium punense	Firmicutes	Rare	+	neg	neg
Clostridium putrefaciens	Firmicutes	Minor	+
Clostridium rectalis	Firmicutes	Rare	+	+	neg
Clostridium roseum	Firmicutes	Rare	+
Clostridium saccharobutylicum	Firmicutes	Unlikely	+	neg		neg
Clostridium saccharoperbutylacetonicum	Firmicutes	Rare	+	neg	neg	neg				+
Clostridium sardiniense	Firmicutes	Rare	+			neg
Clostridium sartagoforme	Firmicutes	Minor	+							neg
Clostridium saudiense	Firmicutes	Minor	+	neg	neg	neg	neg						neg
Clostridium scatologenes	Firmicutes	Rare	+
Clostridium schirmacherense	Firmicutes	Unlikely	+	neg	neg
Clostridium scindens	Firmicutes	Moderate	+	neg
Clostridium senegalense	Firmicutes	Rare	+	neg	neg	neg	+
Clostridium septicum	Firmicutes	Rare	+			neg	neg			+			neg				+
Clostridium sporogenes	Firmicutes	Minor	+	neg		neg	+			+			neg
Clostridium sporosphaeroides	Firmicutes	Minor	+
Clostridium subterminale	Firmicutes	Rare	+			neg				+
Clostridium sulfidigenes	Firmicutes	Rare	+
Clostridium symbiosum	Firmicutes	Widespread	neg			neg	neg						neg
Clostridium taeniosporum	Firmicutes	Unlikely	+			neg
Clostridium tertium	Firmicutes	Moderate	+	neg	neg	neg	neg			+			neg					neg	neg
Clostridium tetani	Firmicutes	Unlikely	+			neg	neg			+			neg
Clostridium thermarum	Firmicutes	Unlikely	+				neg
Clostridium thermobutyricum	Firmicutes	Rare	vr	neg
Clostridium thiosulfatireducens	Firmicutes	Rare	+
Clostridium transplantifaecale	Firmicutes	Rare	+	+	neg
Clostridium tyrobutyricum	Firmicutes	Rare	+			neg				neg
Clostridium vincentii	Firmicutes	Rare	+
Clostridium viride	Firmicutes	Rare	+	neg
Colibacter massiliensis	Firmicutes	Rare	+	neg	neg	+	+
Colidextribacter massiliensis	Firmicutes	Rare	neg	neg	neg
Collinsella aerofaciens	Actinobacteria	Widespread	+				+						neg
Collinsella bouchesdurhonensis	Actinobacteria	Minor	+	neg	neg	neg
Collinsella ihumii	Actinobacteria	Rare	+	neg	neg
Collinsella intestinalis	Actinobacteria	Moderate	+			neg	+						neg
Collinsella massiliensis	Actinobacteria	Rare	+	neg	neg	neg	+						neg
Collinsella phocaeensis	Actinobacteria	Rare	neg	neg	neg
Collinsella provencensis	Actinobacteria	Rare	+	neg	neg
Collinsella stercoris	Actinobacteria	Minor	+			neg	neg						neg
Collinsella tanakaei	Actinobacteria	Minor	+	neg	neg	neg	+						neg
Collinsella vaginalis	Actinobacteria	Rare	+	neg	neg
Comamonas aquatica	Proteobacteria	Non	neg	+	+	neg	neg											neg	neg
Comamonas denitrificans	Proteobacteria	Rare	neg	+	+
Comamonas kerstersii	Proteobacteria	Rare	neg	+	+	neg	neg											neg	neg
Comamonas koreensis	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Comamonas terrigena	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Comamonas testosteroni	Proteobacteria	Rare	neg	+	+	d	neg											neg	neg
Comamonas thiooxydans	Proteobacteria	Rare	neg	+	+	+
Companilactobacillus alimentarius	Firmicutes	Rare	+	neg		neg	neg
Companilactobacillus farciminis	Firmicutes	Rare	+	neg	neg		+
Companilactobacillus mindensis	Firmicutes	Unlikely	+	neg		neg	neg
Companilactobacillus versmoldensis	Firmicutes	Unlikely	+	neg
Conexibacter woesei	Actinobacteria	Rare	+	+	+	neg	neg
Congobacterium massiliense	Firmicutes	Rare	+
Coprobacillus cateniformis	Firmicutes	Moderate	+			neg	d						neg
Coprobacter fastidiosus	Bacteroidetes	Moderate	neg	+		neg	d						+
Coprobacter secundus	Bacteroidetes	Moderate	neg	+									neg
Coprobacter secundus subsp. similis	Bacteroidetes	Rare	neg	+		neg	neg						+
Coprococcus catus	Firmicutes	Widespread	+			neg
Coprococcus comes	Firmicutes	Widespread	+
Coprococcus eutactus	Firmicutes	Widespread	+
Coprococcus phoceensis	Firmicutes	Rare	vr	neg	neg	neg
Coraliomargarita akajimensis	Verrucomicrobia	Non	neg	neg	+		neg											neg	neg
Coriobacterium glomerans	Actinobacteria	Unlikely	+
Corynebacterium accolens	Actinobacteria	Rare	+	+	neg	d(neg)
Corynebacterium afermentans	Actinobacteria	Rare	+	+	neg	neg	neg
Corynebacterium ammoniagenes	Actinobacteria	Rare	+	+		+	neg											neg	neg
Corynebacterium amycolatum	Actinobacteria	Rare	+	+	neg		neg											neg	neg
Corynebacterium appendicis	Actinobacteria	Rare	+	+		+	neg
Corynebacterium argentoratense	Actinobacteria	Rare	+	+	neg
Corynebacterium aurimucosum	Actinobacteria	Rare	+	+	d(neg)	neg	neg
Corynebacterium bouchesdurhonense	Actinobacteria	Rare	+	+	+
Corynebacterium bovis	Actinobacteria	Rare	+	+	d	neg
Corynebacterium callunae	Actinobacteria	Unlikely	+	+	neg	+
Corynebacterium casei	Actinobacteria	Rare	+	+	neg
Corynebacterium coyleae	Actinobacteria	Rare	+	+		neg	neg												neg
Corynebacterium cystitidis	Actinobacteria	Rare	+	+	neg	+				neg								neg	neg
Corynebacterium diphtheriae	Actinobacteria	Non	vr	+
Corynebacterium doosanense	Actinobacteria	Rare	+	+	+	neg
Corynebacterium durum	Actinobacteria	Minor	+	+
Corynebacterium efficiens	Actinobacteria	Rare	+	+
Corynebacterium falsenii	Actinobacteria	Rare	+	+		+
Corynebacterium flavescens	Actinobacteria	Rare	vr	+		neg												neg	neg
Corynebacterium freneyi	Actinobacteria	Rare	+	+		neg	neg
Corynebacterium genitalium	Actinobacteria	Rare	+	+		vr
Corynebacterium glaucum	Actinobacteria	Rare	+	+		neg	neg
Corynebacterium glucuronolyticum	Actinobacteria	Rare	+	+
Corynebacterium glutamicum	Actinobacteria	Rare	+			+
Corynebacterium ihumii	Actinobacteria	Rare	+	+	neg	neg
Corynebacterium jeddahense	Actinobacteria	Rare	+	+
Corynebacterium jeikeium	Actinobacteria	Rare	+	+			neg											neg	neg
Corynebacterium kroppenstedtii	Actinobacteria	Minor	+	+		neg	neg
Corynebacterium lipophiloflavum	Actinobacteria	Rare	+	+
Corynebacterium lujinxingii	Actinobacteria	Rare	+	+
Corynebacterium matruchotii	Actinobacteria	Unlikely	+	+
Corynebacterium minutissimum	Actinobacteria	Rare	+	+		neg	neg					neg						neg	neg
Corynebacterium mucifaciens	Actinobacteria	Rare	+	+		neg	neg						neg
Corynebacterium neomassiliense	Actinobacteria	Rare	+	+	neg	+
Corynebacterium otitidis	Actinobacteria	Rare	+	+	neg
Corynebacterium pacaense	Actinobacteria	Rare	+	+	neg	neg
Corynebacterium propinquum	Actinobacteria	Rare	+	+	neg	d
Corynebacterium provencense	Actinobacteria	Rare	+	+	+
Corynebacterium pseudodiphtheriticum	Actinobacteria	Rare	+	+		+
Corynebacterium pseudogenitalium	Actinobacteria	Rare	+	+	+	+
Corynebacterium pyruviciproducens	Actinobacteria	Rare	+	+		neg
Corynebacterium riegelii	Actinobacteria	Rare	+	+		+
Corynebacterium sanguinis	Actinobacteria	Rare	+	+		+
Corynebacterium simulans	Actinobacteria	Rare	+	+		neg
Corynebacterium singulare	Actinobacteria	Rare	+	+	neg
Corynebacterium stationis	Actinobacteria	Rare	+	+		+				neg								neg	neg
Corynebacterium striatum	Actinobacteria	Rare	+	+		neg	neg					neg						neg	neg
Corynebacterium suicordis	Actinobacteria	Rare	+	+	neg	+
Corynebacterium sundsvallense	Actinobacteria	Rare	+	+	neg	+	neg
Corynebacterium tuberculostearicum	Actinobacteria	Rare	+	+	neg	neg	vr			neg			vr
Corynebacterium ulcerans	Actinobacteria	Rare	+	+	neg
Corynebacterium urealyticum	Actinobacteria	Rare	+	+	neg	+				neg
Corynebacterium ureicelerivorans	Actinobacteria	Rare	+	+	neg		neg
Corynebacterium urinapleomorphum	Actinobacteria	Rare	+	+	neg	+	+
Corynebacterium variabile	Actinobacteria	Unlikely	+	+	neg	+
Corynebacterium wankanglinii	Actinobacteria	Rare	+	+
Corynebacterium xerosis	Actinobacteria	Rare	+	+			neg											neg	neg
Crassaminicella thermophila	Firmicutes	Unlikely	+
Criibacterium bergeronii	Firmicutes	Rare	vr			neg							neg
Cronobacter condimenti	Proteobacteria	Unlikely	neg	+	neg	neg				+
Cronobacter muytjensii	Proteobacteria	Rare	neg	+	neg		+											neg	+
Cronobacter sakazakii	Proteobacteria	Minor	neg	+	neg	neg	+			neg								neg	+
Cronobacter turicensis	Proteobacteria	Rare	neg	+	neg		neg											neg	neg
Cruoricaptor ignavus	Bacteroidetes	Rare	neg	+	+	neg	neg											neg	neg
Cryptobacterium curtum	Actinobacteria	Minor	+	neg		neg
Culturomica massiliensis	Bacteroidetes	Rare	neg	+	neg
Cupriavidus metallidurans	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Curtobacterium flaccumfaciens	Actinobacteria	Unlikely	+	+	neg	neg
Cutibacterium acnes	Actinobacteria	Moderate	+	vr		neg	+						neg				+
Cutibacterium acnes subsp. defendens	Actinobacteria	Rare	+	+
Cutibacterium avidum	Actinobacteria	Rare	+						+
Cutibacterium granulosum	Actinobacteria	Minor	+														+
Cytophaga hutchinsonii	Bacteroidetes	Rare	neg	+	+
Dakarella massiliensis	Proteobacteria	Rare	neg	neg	neg	neg
Dakotella fusiforme	Firmicutes	Rare	+
Dehalobacter restrictus	Firmicutes	Non	neg	neg	neg
Dehalobacterium formicoaceticum	Firmicutes	Unlikely	+
Dehalococcoides mccartyi	Chloroflexi	Unlikely	unk
Deinococcus aquaticus	Deinococcus-Thermus	Unlikely	neg	+	+	neg	neg
Deinococcus caeni	Deinococcus-Thermus	Unlikely	neg	+	neg	neg	neg
Deinococcus geothermalis	Deinococcus-Thermus	Non	+	+	+
Deinococcus proteolyticus	Deinococcus-Thermus	Unlikely	+	+
Deinococcus reticulitermitis	Deinococcus-Thermus	Unlikely	neg		neg	neg	neg
Deinococcus wulumuqiensis	Deinococcus-Thermus	Unlikely	+			neg	neg
Delftia acidovorans	Proteobacteria	Rare	neg	+	+	neg	neg
Delftia lacustris	Proteobacteria	Unlikely	neg	+	+
Delftia tsuruhatensis	Proteobacteria	Rare	neg	+	+	+	+
Dellaglioa algida	Firmicutes	Rare	+	neg	neg
Denitrobacterium detoxificans	Actinobacteria	Rare	+
Dermabacter hominis	Actinobacteria	Rare	+	+	neg	neg	neg					neg						neg	neg
Dermacoccus barathri	Actinobacteria	Non	+			+
Dermacoccus nishinomiyaensis	Actinobacteria	Rare	+	+	+	d(+)	neg		neg	neg								neg	neg
Desemzia incerta	Firmicutes	Rare	+	neg	neg	neg	neg
Desnuesiella massiliensis	Firmicutes	Rare	+	neg	neg	neg
Desulfitobacterium dichloroeliminans	Firmicutes	Unlikely	+
Desulfitobacterium hafniense	Firmicutes	Minor	neg	w
Desulfococcus multivorans	Proteobacteria	Rare	neg
Desulfocurvibacter africanus	Proteobacteria	Unlikely	neg	w	neg
Desulfofarcimen acetoxidans	Firmicutes	Unlikely	neg
Desulfomicrobium baculatum	Proteobacteria	Unlikely	neg
Desulfomicrobium orale	Proteobacteria	Unlikely	neg
Desulforamulus reducens	Firmicutes	Unlikely	+
Desulforudis audaxviator	Firmicutes	Unlikely	+
Desulfoscipio gibsoniae	Firmicutes	Rare	neg
Desulfosporosinus youngiae	Firmicutes	Rare	neg
Desulfotomaculum ruminis	Firmicutes	Unlikely	+
Desulfovibrio desulfuricans	Proteobacteria	Minor	neg	+
Desulfovibrio diazotrophicus	Proteobacteria	Rare	neg	neg
Desulfovibrio fairfieldensis	Proteobacteria	Minor	neg	+	neg
Desulfovibrio intestinalis	Proteobacteria	Rare	neg	+
Desulfovibrio legallii	Proteobacteria	Rare	+
Desulfovibrio longreachensis	Proteobacteria	Rare	neg
Desulfovibrio piger	Proteobacteria	Moderate	neg
Desulfovibrio trichonymphae	Proteobacteria	Non	unk
Desulfovibrio vulgaris	Proteobacteria	Rare	neg
Desulfurispirillum indicum	Chrysiogenetes	Unlikely	neg
Desulfurobacterium thermolithotrophum	Aquificae	Non	neg	neg
Devosia chinhatensis	Proteobacteria	Rare	neg	+	+	+
Devosia limi	Proteobacteria	Unlikely	neg	+	+	neg	neg
Devosia riboflavina	Proteobacteria	Unlikely	neg	+	+	vr	neg											neg	neg
Dialister hominis	Firmicutes	Rare	neg	neg		neg	neg
Dialister invisus	Firmicutes	Moderate	neg	neg
Dialister massiliensis	Firmicutes	Rare	neg	neg	neg	neg
Dialister micraerophilus	Firmicutes	Rare	neg				+
Dialister pneumosintes	Firmicutes	Minor	neg	neg		neg							vr
Dialister propionicifaciens	Firmicutes	Rare	neg
Dialister succinatiphilus	Firmicutes	Minor	neg	neg	neg	neg	neg						neg
Dielma fastidiosa	Firmicutes	Minor	neg	neg	neg	neg	neg						neg
Dietzia cercidiphylli	Actinobacteria	Unlikely	+	+	neg	+
Dietzia cinnamea	Actinobacteria	Rare	+	+	neg	neg	neg												neg
Dietzia kunjamensis	Actinobacteria	Unlikely	+	+	+	neg
Dietzia maris	Actinobacteria	Rare	+	+
Dietzia natronolimnaea	Actinobacteria	Rare	+	+	neg
Dolosigranulum pigrum	Firmicutes	Unlikely	+	neg		neg	+
Dorea faecis	Firmicutes	Minor
Dorea formicigenerans	Firmicutes	Widespread	+	neg	neg	neg	neg						neg
Dorea hylemonae	Firmicutes	Rare
Dorea longicatena	Firmicutes	Widespread	+	neg	neg	neg	neg						neg
Dorea phocaeensis	Firmicutes	Rare	neg	neg	neg
Dorea scindens	Firmicutes	Rare
Drancourtella massiliensis	Firmicutes	Rare	+	neg	neg
Dubosiella newyorkensis	Firmicutes	Rare	+			neg	neg						neg
Duncaniella dubosii	Bacteroidetes	Unlikely	neg	neg	neg	neg	neg						neg
Duncaniella muris	Bacteroidetes	Rare	neg	neg		neg	neg						neg
Duodenibacillus massiliensis	Proteobacteria	Minor	+	neg	neg
Dyadobacter beijingensis	Bacteroidetes	Unlikely	neg	+	+	neg												neg
Dyadobacter fermentans	Bacteroidetes	Unlikely	neg	+	+	neg	neg											+
Dysgonomonas capnocytophagoides	Bacteroidetes	Rare	neg	neg	neg	neg	neg						neg					neg	neg
Dysgonomonas gadei	Bacteroidetes	Rare	neg	+	neg	neg	neg					+	neg						neg
Dysgonomonas massiliensis	Bacteroidetes	Rare	neg	+	neg
Dysgonomonas mossii	Bacteroidetes	Rare	neg	neg	neg	neg	neg						neg
Dysosmobacter welbionis	Firmicutes	Moderate	neg	neg		neg	+						+
Edwardsiella tarda	Proteobacteria	Minor	neg			neg	+						vr
Eggerthella guodeyinii	Actinobacteria	Rare	+
Eggerthella lenta	Actinobacteria	Widespread	+	neg
Eggerthella sinensis	Actinobacteria	Rare	+	+		neg	+						neg
Eggerthella timonensis	Actinobacteria	Rare	+	+	neg	neg
Eggerthia catenaformis	Firmicutes	Minor	+	neg	+	neg	neg		neg			neg						vr	+
Eikenella corrodens	Proteobacteria	Rare	neg	neg	+	neg	neg						+					vr	+
Eisenbergiella massiliensis	Firmicutes	Moderate	neg
Eisenbergiella tayi	Firmicutes	Moderate	neg	+			neg						neg
Elizabethkingia meningoseptica	Bacteroidetes	Unlikely	neg	+	+	neg
Elizabethkingia miricola	Bacteroidetes	Non	neg	+	+	+
Ellagibacter isourolithinifaciens	Actinobacteria	Rare	+	neg		neg	neg
Elusimicrobium minutum	Elusimicrobia	Unlikely	neg	neg
Emergencia timonensis	Firmicutes	Minor	+	neg	neg
Empedobacter brevis	Bacteroidetes	Rare	neg	+	+		neg											neg	neg
Empedobacter falsenii	Bacteroidetes	Rare	neg	+	+	+	neg					+						neg	neg
Enhydrobacter aerosaccus	Proteobacteria	Rare	neg	+	+													+	+
Enorma massiliensis	Actinobacteria	Minor	+		neg	neg	+						neg
Enorma phocaeensis	Actinobacteria	Rare	neg	neg	neg
Enorma timonensis	Actinobacteria	Rare	+	neg	neg	neg	neg						neg
Ensifer adhaerens	Proteobacteria	Unlikely	neg	w	+	+	neg
Enterobacter asburiae	Proteobacteria	Minor	neg		neg	neg	d(+)			neg								neg	+
Enterobacter cancerogenus	Proteobacteria	Minor	neg		neg	neg	+			neg		+						neg	+
Enterobacter cloacae	Proteobacteria	Moderate	neg		neg	neg												neg	+
Enterobacter cloacae subsp. dissolvens	Proteobacteria	Rare	neg		neg	+	+											neg	+
Enterobacter himalayensis	Proteobacteria	Minor
Enterobacter hormaechei subsp. hormaechei	Proteobacteria	Minor	neg		neg	vr	+											neg	+
Enterobacter hormaechei subsp. steigerwaltii	Proteobacteria	Rare	neg		neg	vr	+											neg	+
Enterobacter hormaechei subsp. xiangfangensis	Proteobacteria	Rare	neg
Enterobacter kobei	Proteobacteria	Rare	neg	+	neg	d(+)	+			neg								neg	+
Enterobacter ludwigii	Proteobacteria	Rare	neg	+	neg	neg	+			neg								neg	+
Enterobacter massiliensis	Proteobacteria	Rare	neg	+	neg	neg	neg
Enterobacter mori	Proteobacteria	Rare	neg	+	+		+											+	+
Enterobacter roggenkampii	Proteobacteria	Rare	neg
Enterobacter soli	Proteobacteria	Rare	neg			neg												neg	+
Enterobacter timonensis	Proteobacteria	Rare	neg
Enterocloster aldenensis	Firmicutes	Minor	+				neg
Enterocloster asparagiformis	Firmicutes	Moderate	+
Enterocloster bolteae	Firmicutes	Widespread	+			neg	vr						neg
Enterocloster citroniae	Firmicutes	Moderate	+
Enterocloster clostridioformis	Firmicutes	Widespread	+	neg		neg	neg						neg
Enterocloster lavalensis	Firmicutes	Minor	+	neg
Enterococcus asini	Firmicutes	Rare	+	neg		neg	neg						neg
Enterococcus avium	Firmicutes	Minor	+	neg		neg	d(neg)
Enterococcus burkinafasonensis	Firmicutes	Rare	+	neg	neg
Enterococcus caccae	Firmicutes	Rare	+	neg		neg	neg
Enterococcus canintestini	Firmicutes	Rare	+				+
Enterococcus canis	Firmicutes	Rare	+	neg		d	d
Enterococcus casseliflavus	Firmicutes	Moderate	+	neg		neg	neg												neg
Enterococcus cecorum	Firmicutes	Rare	+	neg	neg	neg	neg
Enterococcus columbae	Firmicutes	Rare	+	neg			neg
Enterococcus devriesei	Firmicutes	Moderate	+				neg
Enterococcus diestrammenae	Firmicutes	Rare	+	neg	neg
Enterococcus dispar	Firmicutes	Rare	+		neg	neg	+						neg
Enterococcus durans	Firmicutes	Moderate	+		neg	neg	+						neg					neg	neg
Enterococcus eurekensis	Firmicutes	Rare	+	neg	neg	neg	neg		neg				neg
Enterococcus faecalis	Firmicutes	Widespread	+	vr		neg	+					neg	neg						neg
Enterococcus faecium	Firmicutes	Widespread	+	neg		neg	+												neg
Enterococcus gallinarum	Firmicutes	Rare	+			neg	+						neg
Enterococcus gilvus	Firmicutes	Rare	+	neg			neg
Enterococcus haemoperoxidus	Firmicutes	Rare	+	vr		neg	+
Enterococcus hermanniensis	Firmicutes	Rare	+	neg			neg
Enterococcus hirae	Firmicutes	Minor	+			neg	+
Enterococcus italicus	Firmicutes	Rare	+	neg			neg
Enterococcus lactis	Firmicutes	Rare	+	neg	neg		+
Enterococcus malodoratus	Firmicutes	Rare	+	neg			neg
Enterococcus massiliensis	Firmicutes	Rare	+	neg	neg
Enterococcus mediterraneensis	Firmicutes	Rare	+	neg	neg
Enterococcus moraviensis	Firmicutes	Rare	+	neg		neg	neg
Enterococcus mundtii	Firmicutes	Rare	+	neg		neg	vr
Enterococcus pallens	Firmicutes	Rare	+	neg		neg	neg
Enterococcus phoeniculicola	Firmicutes	Rare	+	neg		neg	neg
Enterococcus pseudoavium	Firmicutes	Rare	+	neg		neg	neg
Enterococcus raffinosus	Firmicutes	Rare	+	neg		neg	neg
Enterococcus saccharolyticus	Firmicutes	Rare	+	neg	neg		neg
Enterococcus saigonensis	Firmicutes	Unlikely	+	neg	neg	neg	+
Enterococcus sulfureus	Firmicutes	Rare	+				neg
Enterococcus thailandicus	Firmicutes	Rare	+	neg
Enterococcus timonensis	Firmicutes	Rare	+	neg	neg	neg	neg
Enterococcus villorum	Firmicutes	Rare	+	neg		neg	+
Enteroscipio rubneri	Actinobacteria	Rare	+	neg	neg	neg	+						neg
Enterovibrio nigricans	Proteobacteria	Unlikely	neg				d											neg	neg
Ereboglobus luteus	Verrucomicrobia	Unlikely	neg	neg	neg
Erwinia billingiae	Proteobacteria	Unlikely	neg	+	neg	neg	neg			neg								neg	neg
Erwinia tasmaniensis	Proteobacteria	Unlikely	neg			neg	neg											neg	neg
Erwinia teleogrylli	Proteobacteria	Rare	neg	+	neg	neg	neg											neg	neg
Erysipelatoclostridium ramosum	Firmicutes	Widespread	+	neg		neg	neg						neg
Erysipelatoclostridium saccharogumia	Firmicutes	Minor
Erysipelatoclostridium spiroforme	Firmicutes	Minor
Erysipelothrix larvae	Firmicutes	Rare	+	neg	neg
Escherichia albertii	Proteobacteria	Minor	neg	+	neg	neg	neg			neg								+	+
Escherichia coli	Proteobacteria	Widespread	neg	+	neg	neg	neg			neg		vr	+					+	d
Escherichia dysenteriae	Proteobacteria	Rare
Escherichia fergusonii	Proteobacteria	Minor	neg	+	neg	neg	neg			neg								+	+
Escherichia marmotae	Proteobacteria	Unlikely	neg	+	neg	neg	neg											+	neg
Escherichia ruysiae	Proteobacteria	Rare	neg	+	neg	neg						+						neg	+
Ethanoligenens harbinense	Firmicutes	Rare	+	neg	neg	+	neg
Eubacterium barkeri	Firmicutes	Rare	+	neg
Eubacterium biforme	Firmicutes	Moderate	+	neg
Eubacterium brachy	Firmicutes	Rare	+	neg
Eubacterium callanderi	Firmicutes	Minor	+	neg		neg	neg						vr
Eubacterium cellulosolvens	Firmicutes	Minor	+	neg
Eubacterium coprostanoligenes	Firmicutes	Minor	+
Eubacterium dolichum	Firmicutes	Moderate	+	neg		neg	+						+
Eubacterium infirmum	Firmicutes	Rare	+	neg		neg
Eubacterium limosum	Firmicutes	Moderate	+	neg		neg	neg						+
Eubacterium maltosivorans	Firmicutes	Rare	+	+	neg	neg
Eubacterium multiforme	Firmicutes	Rare	+	neg
Eubacterium nodatum	Firmicutes	Rare	+	neg
Eubacterium oxidoreducens	Firmicutes	Rare	+
Eubacterium plexicaudatum	Firmicutes	Rare	+
Eubacterium pyruvativorans	Firmicutes	Rare	+	neg		neg
Eubacterium ramulus	Firmicutes	Moderate	+	neg		neg
Eubacterium rectale	Firmicutes	Widespread	+	neg		neg	neg						neg
Eubacterium ruminantium	Firmicutes	Rare	+	neg
Eubacterium saphenum	Firmicutes	Rare	+	neg		neg
Eubacterium siraeum	Firmicutes	Widespread	+	neg		neg	neg						neg
Eubacterium sulci	Firmicutes	Rare	+	neg	neg	neg	neg			neg			neg
Eubacterium tenue	Firmicutes	Minor	+	neg		neg	neg						neg
Eubacterium uniforme	Firmicutes	Rare	+	neg
Eubacterium ventriosum	Firmicutes	Widespread	+	neg		neg	neg		neg				neg
Eubacterium xylanophilum	Firmicutes	Rare	+	neg
Eubacterium yurii	Firmicutes	Rare	+	neg
Ewingella americana	Proteobacteria	Rare	neg	+	neg	neg				neg		+						neg	neg
Exiguobacterium aurantiacum	Firmicutes	Rare	+	+	neg	neg	neg											neg	neg
Exiguobacterium marinum	Firmicutes	Rare	vr	+	neg
Exiguobacterium mexicanum	Firmicutes	Rare	+	+	+
Exiguobacterium undae	Firmicutes	Rare	+	+	+	neg
Ezakiella coagulans	Bacteroidetes	Minor	neg			neg	+						neg
Ezakiella massiliensis	Bacteroidetes	Rare	+	+	+
Ezakiella peruensis	Firmicutes	Rare	+	neg		neg	neg						neg
Facklamia hominis	Firmicutes	Rare	+	neg		d	+
Facklamia languida	Firmicutes	Rare	+	neg	neg	neg	neg
Faecalibacillus faecis	Firmicutes	Rare	+	neg		neg	neg						neg
Faecalibacillus intestinalis	Firmicutes	Rare	+	neg		neg	neg						neg
Faecalibacterium prausnitzii	Firmicutes	Widespread	neg	neg		neg	neg						neg
Faecalibaculum rodentium	Firmicutes	Rare	+	neg		neg
Faecalicatena contorta	Firmicutes	Minor	+	neg		neg	neg						neg
Faecalicatena faecis	Firmicutes	Moderate
Faecalicatena fissicatena	Firmicutes	Minor	+	neg		neg	neg						neg
Faecalicatena glycyrrhizinilyticum	Firmicutes	Minor
Faecalicatena gnavus	Firmicutes	Moderate
Faecalicatena lactaris	Firmicutes	Moderate
Faecalicatena orotica	Firmicutes	Minor	+	neg		neg	neg		neg				neg
Faecalicatena torques	Firmicutes	Moderate
Faecalicoccus pleomorphus	Firmicutes	Minor	+	neg
Faecalimonas umbilicata	Firmicutes	Rare	+	neg		neg	neg						neg
Faecalitalea cylindroides	Firmicutes	Widespread	+	neg		neg	neg						neg
Fannyhessea vaginae	Actinobacteria	Minor	+			neg	+						neg
Fastidiosipila sanguinis	Firmicutes	Rare	+	neg		neg	neg						neg
Fenollaria massiliensis	Firmicutes	Minor	neg	neg	neg	neg
Fenollaria timonensis	Firmicutes	Rare	neg	neg	neg
Fermentimonas caenicola	Bacteroidetes	Rare	neg	+	w	neg	neg						neg
Ferrimonas balearica	Proteobacteria	Rare	neg	+	+	neg	neg			+								neg
Fibrobacter succinogenes	Fibrobacteres	Unlikely	neg
Fictibacillus arsenicus	Firmicutes	Unlikely	+	+	+	neg	neg					neg
Filifactor alocis	Firmicutes	Minor	neg	neg	neg	neg				neg
Filifactor villosus	Firmicutes	Unlikely	+
Finegoldia magna	Firmicutes	Widespread	+	w		neg	vr		neg				neg
Flaviflexus massiliensis	Actinobacteria	Rare	+	+	neg
Flavobacterium banpakuense	Bacteroidetes	Unlikely	neg	+	neg	neg	neg
Flavobacterium caeni	Bacteroidetes	Non	neg	+	+	neg	neg
Flavobacterium cheniae	Bacteroidetes	Rare	neg	+	+	neg	neg
Flavobacterium daejeonense	Bacteroidetes	Unlikely	neg	+	+	neg	neg
Flavobacterium lindanitolerans	Bacteroidetes	Rare	neg	+	neg	neg
Flavobacterium oncorhynchi	Bacteroidetes	Unlikely	neg	+	+
Flavobacterium sakaeratica	Bacteroidetes	Rare	neg
Flavonifractor plautii	Firmicutes	Widespread	vr	neg		neg	neg						neg
Flexispira rappini	Proteobacteria	Rare	neg	neg	+	+
Flintibacter butyricus	Firmicutes	Rare	neg	neg	neg	neg
Fournierella massiliensis	Firmicutes	Moderate	neg	neg	neg
Francisella tularensis	Proteobacteria	Non	neg	w	neg	neg
Franconibacter pulveris	Proteobacteria	Rare	neg	+	w		neg											neg	neg
Fredinandcohnia humi	Firmicutes	Non	+	+	+	neg	neg											neg	neg
Fretibacterium fastidiosum	Synergistetes	Rare	neg
Fructilactobacillus florum	Firmicutes	Unlikely	+	vr
Fructilactobacillus fructivorans	Firmicutes	Unlikely	+	neg
Fructilactobacillus sanfranciscensis	Firmicutes	Rare	+	neg
Fucophilus fucoidanolyticus	Verrucomicrobia	Rare	neg	+	neg
Fundidesulfovibrio putealis	Proteobacteria	Rare	neg
Furfurilactobacillus rossiae	Firmicutes	Unlikely	+	neg
Fusicatenibacter saccharivorans	Firmicutes	Moderate	+			neg
Fusobacterium canifelinum	Fusobacteria	Rare	neg
Fusobacterium gonidiaformans	Fusobacteria	Minor	neg			neg	neg						neg
Fusobacterium massiliense	Fusobacteria	Rare	neg	neg	neg	neg
Fusobacterium mortiferum	Fusobacteria	Moderate	neg			neg	neg						neg
Fusobacterium naviforme	Fusobacteria	Rare	neg
Fusobacterium necrogenes	Fusobacteria	Rare	neg
Fusobacterium necrophorum	Fusobacteria	Minor	neg			neg	neg						neg
Fusobacterium necrophorum subsp. funduliforme	Fusobacteria	Rare	neg	neg						+								neg
Fusobacterium nucleatum	Fusobacteria	Minor	neg	neg		neg	neg						neg
Fusobacterium nucleatum subsp. animalis	Fusobacteria	Rare	neg	neg
Fusobacterium nucleatum subsp. nucleatum	Fusobacteria	Minor	neg	neg		neg										+
Fusobacterium nucleatum subsp. polymorphum	Fusobacteria	Rare	neg	neg		neg
Fusobacterium nucleatum subsp. vincentii	Fusobacteria	Rare	neg	neg		neg
Fusobacterium perfoetens	Fusobacteria	Rare	neg	neg
Fusobacterium periodonticum	Fusobacteria	Minor	neg	neg	neg	neg	neg						+						neg
Fusobacterium pseudoperiodonticum	Fusobacteria	Unlikely	neg
Fusobacterium russii	Fusobacteria	Minor	neg			neg	neg						neg
Fusobacterium ulcerans	Fusobacteria	Rare	neg	neg	neg	neg
Fusobacterium varium	Fusobacteria	Moderate	neg			neg	neg						neg
Gabonia massiliensis	Bacteroidetes	Rare	neg	+	neg	neg
Gabonibacter massiliensis	Bacteroidetes	Minor	neg	neg	neg	neg
Gabonibacter timonensis	Bacteroidetes	Rare	+	neg	neg
Gallibacterium anatis	Proteobacteria	Rare	neg	+	+	neg	neg											neg	neg
Gardnerella leopoldii	Actinobacteria	Unlikely	neg
Gardnerella vaginalis	Actinobacteria	Minor	neg	neg	neg	neg
Gemella asaccharolytica	Firmicutes	Rare	vr	neg	neg	neg
Gemella haemolysans	Firmicutes	Minor	+	neg		neg	neg					neg	neg						neg
Gemella morbillorum	Firmicutes	Minor	+	neg		neg	neg					neg	neg						neg
Gemella sanguinis	Firmicutes	Minor	+	neg	neg	neg	neg						neg
Gemmatimonas groenlandica	Gemmatimonadetes	Non	neg
Gemmiger formicilis	Firmicutes	Moderate	neg	neg		neg
Gemmiger variabile	Firmicutes	Moderate
Geobacillus stearothermophilus	Firmicutes	Unlikely	+	+	+	neg	neg											neg	neg
Geobacillus vulcani	Firmicutes	Unlikely	+	+		neg
Geodermatophilus obscurus	Actinobacteria	Non	+
Georgenia muralis	Actinobacteria	Rare	+	w	w	neg						neg
Georgenia satyanarayanai	Actinobacteria	Unlikely	+	+	neg							neg
Geosporobacter ferrireducens	Firmicutes	Unlikely	neg
Gleimia europaea	Actinobacteria	Rare	+	neg		neg
Globicatella sulfidifaciens	Firmicutes	Rare	vr	neg		neg	neg
Glutamicibacter arilaitensis	Actinobacteria	Unlikely	+	+	neg	neg
Glutamicibacter protophormiae	Actinobacteria	Rare	+
Gorbachella massiliensis	Firmicutes	Rare	neg	neg	neg
Gordonia alkanivorans	Actinobacteria	Rare	+	+	neg
Gordonia rubripertincta	Actinobacteria	Unlikely	+	+	neg	+	neg											neg	neg
Gordonia terrae	Actinobacteria	Rare	+	+	neg	+	+											neg	+
Gordonibacter massiliensis	Actinobacteria	Rare	+	+	neg
Gordonibacter pamelaeae	Actinobacteria	Moderate	+	+	neg	neg	+						vr
Gordonibacter urolithinfaciens	Actinobacteria	Minor	+	+	neg	neg	+						neg
Gorillibacterium timonense	Firmicutes	Rare	neg	neg	neg
Gottschalkia acidurici	Firmicutes	Unlikely	+	neg		neg
Gracilibacillus dipsosauri	Firmicutes	Rare	+	+	+	neg
Gracilibacillus massiliensis	Firmicutes	Rare	+	+	neg	+
Gracilibacillus phocaeensis	Firmicutes	Rare	+	+	+
Gracilibacillus thailandensis	Firmicutes	Non	+	+	+	neg	neg
Gracilibacillus timonensis	Firmicutes	Rare	+	+	neg
Granulicatella adiacens	Firmicutes	Minor	+	neg	neg	neg	neg						neg
Granulicatella elegans	Firmicutes	Minor	+	neg	neg	neg	+						neg
Granulicatella para-adiacens	Firmicutes	Rare	+	neg	neg	neg	neg
Grimontia hollisae	Proteobacteria	Rare	neg		+	neg	neg			neg								neg	neg
Gulosibacter bifidus	Actinobacteria	Unlikely	+	+	neg	neg
Haemophilus ducreyi	Proteobacteria	Rare	neg	neg	+	neg	neg												neg
Haemophilus haemolyticus	Proteobacteria	Minor	neg	+	+	+	neg			neg						d(neg)		neg	neg
Haemophilus influenzae	Proteobacteria	Minor	neg	+	+	d	neg					neg						d	d
Haemophilus parahaemolyticus	Proteobacteria	Minor	neg	d	+	+	neg											neg	neg
Haemophilus parainfluenzae	Proteobacteria	Widespread	neg	d(+)	+	d(+)	neg					vr				neg		d	d(+)
Haemophilus paraphrohaemolyticus	Proteobacteria	Rare	neg	+	+	+	neg											neg	neg
Haemophilus pittmaniae	Proteobacteria	Minor	neg	d	d	neg	neg					d						neg	neg
Haemophilus quentini	Proteobacteria	Rare	neg	+	+	+						neg							+
Haemophilus sputorum	Proteobacteria	Minor	neg	vr	+	+	neg					+						neg	neg
Hafnia alvei	Proteobacteria	Minor	neg	+	neg	neg	neg											+	+
Hafnia paralvei	Proteobacteria	Rare	neg		neg		neg											+	+
Hahella ganghwensis	Proteobacteria	Rare	neg	+	+	neg	neg											neg	neg
Halanaerobaculum tunisiense	Firmicutes	Unlikely	neg
Halobacillus dabanensis	Firmicutes	Unlikely	+	+	+	neg				+
Halobacillus ihumii	Firmicutes	Rare	+	+	neg	+
Halobacillus karajensis	Firmicutes	Non	+	+	+	neg
Halobacillus massiliensis	Firmicutes	Unlikely	+	neg	+
Halobacillus salinus	Firmicutes	Rare	+	+	+	neg
Halobacillus trueperi	Firmicutes	Unlikely	+	+	+	neg	neg			+
Halobacteroides halobius	Firmicutes	Unlikely	neg	neg	neg
Haloferax alexandrinus	Euryarchaeota	Unlikely	neg	+	+	neg	neg											neg	neg
Haloferax massiliensis	Euryarchaeota	Rare	neg	+	+
Haloimpatiens massiliensis	Firmicutes	Rare	+	neg	neg
Halomonas massiliensis	Proteobacteria	Rare	neg	neg	neg
Halomonas muralis	Proteobacteria	Non	neg	+	+	neg
Halomonas salina	Proteobacteria	Non	neg	+	+	+				d(neg)			neg					neg
Halomonas utahensis	Proteobacteria	Unlikely	neg	+	+	+	neg											neg	neg
Halopseudomonas bauzanensis	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Halopseudomonas pelagia	Proteobacteria	Unlikely	neg	+	+	neg	neg
Haploplasma axanthum	Tenericutes	Unlikely	neg			neg
Harryflintia acetispora	Firmicutes	Rare	neg	+	neg	neg
Hathewaya histolytica	Firmicutes	Rare	+
Hathewaya limosa	Firmicutes	Rare	+	neg						+
Hathewaya massiliensis	Firmicutes	Rare	+	+	neg
Helcobacillus massiliensis	Actinobacteria	Rare	+	+	neg	neg
Helcococcus sueciensis	Firmicutes	Rare	+	neg		neg							neg
Helicobacter bilis	Proteobacteria	Unlikely	neg	d	+	+						+
Helicobacter canadensis	Proteobacteria	Unlikely	neg	+	+	neg						neg
Helicobacter canis	Proteobacteria	Unlikely	neg	neg	+	neg
Helicobacter cinaedi	Proteobacteria	Rare	neg	vr	+	neg	neg					neg	neg
Helicobacter felis	Proteobacteria	Non	neg	+	+		neg					+
Helicobacter fennelliae	Proteobacteria	Rare	neg	+	+	neg						+
Helicobacter heilmannii	Proteobacteria	Non	neg	+	+	+						+
Helicobacter macacae	Proteobacteria	Unlikely	neg	w	+	neg						neg
Helicobacter pametensis	Proteobacteria	Rare	neg	+	+	neg						neg						neg	neg
Helicobacter pullorum	Proteobacteria	Minor	neg	+	+	neg						neg
Helicobacter pylori	Proteobacteria	Non	neg	+	+	+						+
Helicobacter rodentium	Proteobacteria	Rare	neg	+	w	neg						neg
Helicobacter winghamensis	Proteobacteria	Rare	neg	neg	+	neg
Heliomicrobium modesticaldum	Firmicutes	Unlikely	neg
Herbaspirillum autotrophicum	Proteobacteria	Unlikely	neg	+	+	+
Herbaspirillum huttiense	Proteobacteria	Rare	neg	+	+	+
Herbinix hemicellulosilytica	Firmicutes	Unlikely	+	neg
Herbinix luporum	Firmicutes	Unlikely	+	neg														neg	neg
Herminiimonas contaminans	Proteobacteria	Unlikely	neg	+	+	w
Hespellia porcina	Firmicutes	Rare	+	neg	neg
Hespellia stercorisuis	Firmicutes	Rare	+	neg	neg
Heyndrickxia oleronia	Firmicutes	Unlikely	neg	+		neg
Heyndrickxia sporothermodurans	Firmicutes	Unlikely	+	+	+	neg
Histophilus somni	Proteobacteria	Rare	neg	neg	+	neg	neg											neg	neg
Holdemanella biformis	Firmicutes	Moderate	+			neg
Holdemania filiformis	Firmicutes	Moderate	+	neg		neg	neg						neg
Holdemania massiliensis	Firmicutes	Minor	+	neg	+	neg	neg						neg
Holophaga foetida	Acidobacteria	Non	neg
Howardella ureilytica	Firmicutes	Rare	+			+
Hugonella massiliensis	Actinobacteria	Rare	+	neg	neg	neg
Humisphaera borealis	Planctomycetes	Unlikely	neg	+	+	+
Hungatella effluvii	Firmicutes	Minor	+	neg	neg	+
Hungatella hathewayi	Firmicutes	Widespread	+	neg	neg
Hungatella saccharolyticum	Firmicutes	Rare
Hungatella xylanolytica	Firmicutes	Rare	neg	neg		neg
Hydrogenibacillus schlegelii	Firmicutes	Unlikely	vr	+	w	neg
Hydrogenoanaerobacterium saccharovorans	Firmicutes	Rare	neg	neg	neg	neg	neg						neg
Hydrogenophaga pseudoflava	Proteobacteria	Unlikely	neg	w	+
Hydrogenovibrio crunogenus	Proteobacteria	Unlikely	neg
Hymenobacter rigui	Bacteroidetes	Rare	neg	+	neg	neg	neg											neg	neg
Hymenobacter russus	Bacteroidetes	Unlikely	neg	+	neg	+	+
Hyphomicrobium facile	Proteobacteria	Rare	neg	+	+													neg
Ihubacter massiliensis	Firmicutes	Rare	neg	neg	neg
Ihuprevotella massiliensis	Bacteroidetes	Rare	neg
Ileibacterium valens	Firmicutes	Rare	+			neg	neg						neg
Inediibacterium massiliense	Firmicutes	Rare	+	neg	neg	neg
Intestinibacillus massiliensis	Firmicutes	Rare	neg	neg	neg
Intestinibacter bartlettii	Firmicutes	Widespread	+	neg		neg	neg						neg
Intestinibaculum porci	Firmicutes	Unlikely	+	neg		neg	neg						neg
Intestinimonas butyriciproducens	Firmicutes	Moderate	+
Intestinimonas gabonensis	Firmicutes	Rare	neg	neg	neg
Intestinimonas massiliensis	Firmicutes	Moderate	neg	neg	neg	neg
Intestinimonas timonensis	Firmicutes	Rare	neg	neg	neg
Isoptericola variabilis	Actinobacteria	Rare	+
Janibacter anophelis	Actinobacteria	Rare	+
Janibacter hoylei	Actinobacteria	Non	+	+	+
Janibacter limosus	Actinobacteria	Unlikely	+	+	neg	neg	+											+	+
Janibacter terrae	Actinobacteria	Rare	+	+	w					+
Jeotgalibaca arthritidis	Firmicutes	Unlikely	+	neg
Jeotgalibaca porci	Firmicutes	Unlikely	+	neg
Jeotgalicoccus halotolerans	Firmicutes	Rare	+	+	+	neg
Johnsonella ignava	Firmicutes	Rare	neg		neg					neg
Jonquetella anthropi	Synergistetes	Rare	neg	neg	neg
Kalamiella piersonii	Proteobacteria	Unlikely	neg
Kallipyga gabonensis	Firmicutes	Rare	+	+	neg	neg
Kallipyga massiliensis	Firmicutes	Rare	+	neg	neg	neg	+						neg
Kandleria vitulina	Firmicutes	Rare	+		neg	neg	neg
Kerstersia gyiorum	Proteobacteria	Rare	neg	+	neg	neg	neg			neg								neg	neg
Khelaifiella massiliensis	Firmicutes	Rare	+	neg	neg
Kineothrix alysoides	Firmicutes	Rare	neg	neg	neg	neg
Kingella denitrificans	Proteobacteria	Unlikely	neg	neg	+	neg				d								neg	neg
Kingella kingae	Proteobacteria	Rare	neg	neg	+	neg
Kingella oralis	Proteobacteria	Unlikely	neg	d(neg)	+	neg	neg											neg	neg
Kiritimatiella glycovorans	Kiritimatiellaeota	Unlikely	neg	neg	neg
Klebsiella aerogenes	Proteobacteria	Moderate	neg	+	neg	+	neg			neg			neg					+	+
Klebsiella grimontii	Proteobacteria	Minor	neg		neg	neg												neg	neg
Klebsiella michiganensis	Proteobacteria	Minor	neg	+	neg	neg	neg											+	neg
Klebsiella oxytoca	Proteobacteria	Moderate	neg		neg	+	neg			neg								+	neg
Klebsiella pneumoniae	Proteobacteria	Widespread	neg		neg	+	neg			neg								+	neg
Klebsiella pneumoniae subsp. ozaenae	Proteobacteria	Rare	neg		neg	d												d	neg
Klebsiella pneumoniae subsp. rhinoscleromatis	Proteobacteria	Rare	neg		neg	neg												neg	neg
Klebsiella quasipneumoniae subsp. quasipneumoniae	Proteobacteria	Minor	neg			+												neg	neg
Klebsiella quasivariicola	Proteobacteria	Minor
Klebsiella variicola	Proteobacteria	Minor	neg		neg	vr	neg											vr	neg
Kluyvera ascorbata	Proteobacteria	Minor	neg	+	neg	neg	neg			neg								+	+
Kluyvera cryocrescens	Proteobacteria	Rare	neg	+	neg	neg				neg								+	+
Kluyvera georgiana	Proteobacteria	Rare	neg	+	neg	neg	neg			neg								+	+
Kluyvera intermedia	Proteobacteria	Rare	neg	+	neg	neg	neg			neg								neg	+
Kocuria carniphila	Actinobacteria	Unlikely	+	+	neg	neg	neg												neg
Kocuria marina	Actinobacteria	Rare	+	+	neg	vr	neg											neg	neg
Kocuria palustris	Actinobacteria	Unlikely	+	+	neg	+	neg											neg	neg
Kocuria polaris	Actinobacteria	Unlikely	+	+	+	neg	neg											neg
Kocuria rhizophila	Actinobacteria	Unlikely	+	+	neg	neg	neg
Kocuria rosea	Actinobacteria	Unlikely	+	+	neg	neg	neg		neg									+
Kocuria salsicia	Actinobacteria	Unlikely	+	+	neg	+	neg
Kocuria varians	Actinobacteria	Rare	+	+	neg	d(+)	neg		neg	neg
Kosakonia cowanii	Proteobacteria	Minor	neg			neg	neg			neg								neg	neg
Krasilnikoviella flava	Actinobacteria	Rare	+		neg
Kurthia gibsonii	Firmicutes	Rare	+	+	neg	neg	neg			+								neg	neg
Kurthia massiliensis	Firmicutes	Rare	+	+	neg
Kurthia senegalensis	Firmicutes	Rare	+	+	neg
Kurthia sp. Dielmo	Firmicutes	Rare	+
Kurthia zopfii	Firmicutes	Rare	+	+		neg				neg
Kushneria sinocarnis	Firmicutes	Unlikely	neg	+	neg	neg	neg			neg								neg	neg
Kytococcus schroeteri	Actinobacteria	Rare	+	+	neg	neg	+												neg
Kytococcus sedentarius	Actinobacteria	Rare	+	+	d(neg)	neg	+											+
Labilithrix luteola	Proteobacteria	Non	neg	+	+
Lachnoanaerobaculum orale	Firmicutes	Rare	+			+
Lachnoanaerobaculum saburreum	Firmicutes	Rare	+			neg	neg						neg
Lachnoanaerobaculum umeaense	Firmicutes	Rare	+			neg
Lachnobacterium bovis	Firmicutes	Rare	+
Lachnoclostridium bouchesdurhonense	Firmicutes	Rare	neg	neg	neg
Lachnoclostridium edouardi	Firmicutes	Minor	+	neg	neg
Lachnoclostridium massiliosenegalense	Firmicutes	Rare	+	neg	neg
Lachnoclostridium pacaense	Firmicutes	Rare	vr	neg	neg	neg
Lachnoclostridium phocaeense	Firmicutes	Rare	+	neg	neg
Lachnoclostridium phytofermentans	Firmicutes	Minor	neg			neg
Lachnoclostridium touaregense	Firmicutes	Rare	+	neg	neg
Lachnospira eligens	Firmicutes	Widespread	+	neg		neg	neg						neg
Lachnospira multipara	Firmicutes	Rare	+	neg
Lachnospira pectinoschiza	Firmicutes	Minor	+	neg
Lachnospira rogosae	Firmicutes	Moderate
Lacrimispora aerotolerans	Firmicutes	Rare	neg	neg		neg
Lacrimispora amygdalina	Firmicutes	Rare	+	neg
Lacrimispora celerecrescens	Firmicutes	Rare	+	neg		neg
Lacrimispora indolis	Firmicutes	Minor	neg			neg	neg						neg
Lacrimispora saccharolytica	Firmicutes	Moderate	neg	neg		neg
Lacrimispora sphenoides	Firmicutes	Minor	+			neg	neg						neg
Lacticaseibacillus casei	Firmicutes	Rare	+	+	neg	neg	neg
Lacticaseibacillus paracasei	Firmicutes	Minor	+	neg		neg	neg						neg						neg
Lacticaseibacillus paracasei subsp. tolerans	Firmicutes	Unlikely	+			neg
Lacticaseibacillus paragasseri	Firmicutes	Unlikely	+	neg		neg
Lacticaseibacillus rhamnosus	Firmicutes	Moderate	+	neg	neg	neg	neg						neg					neg	neg
Lacticaseibacillus saniviri	Firmicutes	Unlikely	+	neg
Lacticaseibacillus sharpeae	Firmicutes	Unlikely	+	neg		neg
Lacticaseibacillus zeae	Firmicutes	Unlikely	+	neg	neg	neg
Lacticigenium naphtae	Firmicutes	Non	vr	neg
Lactiplantibacillus paraplantarum	Firmicutes	Rare	+	+
Lactiplantibacillus pentosus	Firmicutes	Rare	+	neg			neg
Lactiplantibacillus plantarum	Firmicutes	Moderate	+	neg
Lactiplantibacillus xiangfangensis	Firmicutes	Rare	+	neg
Lactobacillus acidophilus	Firmicutes	Widespread	+	neg		neg	neg						neg
Lactobacillus amylolyticus	Firmicutes	Unlikely	+	neg		neg
Lactobacillus amylovorus	Firmicutes	Minor	+			neg	neg						neg
Lactobacillus crispatus	Firmicutes	Moderate	+	neg		neg	neg						neg
Lactobacillus delbrueckii subsp. bulgaricus	Firmicutes	Rare	+	neg
Lactobacillus delbrueckii subsp. delbrueckii	Firmicutes	Minor	+			neg	neg
Lactobacillus delbrueckii subsp. lactis	Firmicutes	Unlikely	+	neg
Lactobacillus equicursoris	Firmicutes	Rare	+	neg
Lactobacillus gasseri	Firmicutes	Moderate	+	neg		neg	neg						neg
Lactobacillus gigeriorum	Firmicutes	Unlikely	+				neg
Lactobacillus hamsteri	Firmicutes	Rare	+	neg
Lactobacillus helveticus	Firmicutes	Rare	+			neg	neg						neg
Lactobacillus hominis	Firmicutes	Unlikely	+	neg	neg	neg	neg											neg	neg
Lactobacillus iners	Firmicutes	Rare	+	neg	neg	neg	neg						neg
Lactobacillus intestinalis	Firmicutes	Unlikely	+	neg
Lactobacillus jensenii	Firmicutes	Unlikely	+	vr		neg	vr						neg
Lactobacillus johnsonii	Firmicutes	Minor	+	neg		neg	neg
Lactobacillus kalixensis	Firmicutes	Minor	+	neg
Lactobacillus kefiranofaciens	Firmicutes	Rare	+	neg
Lactobacillus leichmannii	Firmicutes	Rare	+	neg
Lactobacillus pasteurii	Firmicutes	Unlikely	+	neg	neg	neg	neg											neg	neg
Lactobacillus psittaci	Firmicutes	Unlikely	+	neg	neg	neg	neg
Lactobacillus rogosae	Firmicutes	Rare	+
Lactobacillus timonensis	Firmicutes	Unlikely	+	neg	neg
Lactobacillus ultunensis	Firmicutes	Minor	+	neg
Lactococcus cremoris	Firmicutes	Rare	+	neg			neg
Lactococcus garvieae	Firmicutes	Minor	+	neg		neg	+						neg
Lactococcus lactis subsp. lactis	Firmicutes	Widespread	+	neg		neg	+						neg
Lactococcus petauri	Firmicutes	Rare	+	neg	neg
Lactococcus plantarum	Firmicutes	Rare	+	neg		neg	neg
Lactococcus raffinolactis	Firmicutes	Minor	+	neg		neg	d(neg)
Lactonifactor longoviformis	Firmicutes	Minor	neg	neg
Lacunisphaera limnophila	Verrucomicrobia	Unlikely	neg	neg	+
Lagierella massiliensis	Firmicutes	Rare	+	+	neg	neg
Lancefieldella parvula	Actinobacteria	Minor	+
Lancefieldella rimae	Actinobacteria	Minor	+	neg
Lapidilactobacillus dextrinicus	Firmicutes	Non	+	neg		neg
Laribacter hongkongensis	Proteobacteria	Rare	neg	+	+	+	+											neg	neg
Lascolabacillus massiliensis	Bacteroidetes	Rare	neg	neg	neg
Latilactobacillus curvatus	Firmicutes	Minor	+	+		neg	vr
Latilactobacillus sakei	Firmicutes	Minor	+	+		neg	neg
Latilactobacillus sakei subsp. carnosus	Firmicutes	Rare	+
Lautropia mirabilis	Proteobacteria	Minor	neg	+	+	+	neg					+	neg					neg	neg
Lawsonella clevelandensis	Actinobacteria	Rare	vr
Lawsonia intracellularis	Proteobacteria	Unlikely	neg
Lawsonibacter asaccharolyticus	Firmicutes	Moderate	+	neg		neg	neg						neg
Leclercia adecarboxylata	Proteobacteria	Rare	neg		neg	neg	neg											neg	neg
Lederbergia galactosidilyticus	Firmicutes	Rare	+	+		d	neg											neg	neg
Lederbergia lentus	Firmicutes	Unlikely	+	+		+	neg											neg	neg
Legionella bozemanae	Proteobacteria	Non	neg	+	d	neg
Legionella pneumophila	Proteobacteria	Non	neg	+	d	neg	neg											neg	neg
Lelliottia amnigena	Proteobacteria	Rare	neg			d	vr											neg	+
Lelliottia nimipressuralis	Proteobacteria	Rare	neg				+											neg	+
Leminorella grimontii	Proteobacteria	Rare	neg	+	neg	neg	neg			neg								neg	neg
Leminorella richardii	Proteobacteria	Rare	neg	+	neg	neg	neg			neg								neg	neg
Lentibacillus massiliensis	Firmicutes	Rare	+	neg	+
Lentibacillus timonensis	Firmicutes	Rare	+
Lentilactobacillus buchneri subsp. buchneri	Firmicutes	Minor	+	neg		neg	+
Lentilactobacillus diolivorans	Firmicutes	Unlikely	+
Lentilactobacillus farraginis	Firmicutes	Unlikely	+	neg
Lentilactobacillus hilgardii	Firmicutes	Rare	+
Lentilactobacillus kefiri	Firmicutes	Non	+	neg
Lentilactobacillus kisonensis	Firmicutes	Unlikely	+	neg
Lentilactobacillus otakiensis	Firmicutes	Unlikely	+	neg
Lentilactobacillus parabuchneri	Firmicutes	Rare	+			neg	+
Lentilactobacillus parafarraginis	Firmicutes	Unlikely	+	neg
Lentilactobacillus senioris	Firmicutes	Unlikely	+	neg
Leptospira interrogans	Spirochaetes	Non	neg	+	+
Leptotrichia amnionii	Fusobacteria	Rare	neg			neg	neg						neg
Leptotrichia buccalis	Fusobacteria	Rare	neg	neg		neg	neg					vr	neg					neg	neg
Leptotrichia hofstadii	Fusobacteria	Rare	neg	+	neg		neg							+
Leptotrichia hongkongensis	Fusobacteria	Rare	vr	neg		neg	neg												neg
Leptotrichia massiliensis	Fusobacteria	Rare	+	+	neg
Leptotrichia shahii	Fusobacteria	Rare	neg	+			neg							neg
Leptotrichia wadei	Fusobacteria	Rare	neg	+	neg		neg
Leucobacter aridicollis	Actinobacteria	Unlikely	+	+	neg	+	neg
Leuconostoc carnosum	Firmicutes	Unlikely	+	neg			neg			+
Leuconostoc citreum	Firmicutes	Minor	+			neg	neg
Leuconostoc gelidum	Firmicutes	Rare	+	neg						+
Leuconostoc gelidum subsp. gasicomitatum	Firmicutes	Non	+	neg
Leuconostoc holzapfelii	Firmicutes	Rare	+	neg
Leuconostoc inhae	Firmicutes	Unlikely	+	neg			neg
Leuconostoc kimchii	Firmicutes	Rare	+
Leuconostoc lactis	Firmicutes	Minor	+	neg	neg
Leuconostoc mesenteroides subsp. cremoris	Firmicutes	Rare	+	neg	neg
Leuconostoc mesenteroides subsp. mesenteroides	Firmicutes	Minor	+	neg		neg	neg						neg
Leuconostoc pseudomesenteroides	Firmicutes	Unlikely	+
Levilactobacillus brevis	Firmicutes	Minor	+	neg		neg	+						neg
Levilactobacillus brevis subsp. gravesensis	Firmicutes	Unlikely	+	neg	neg
Levilactobacillus namurensis	Firmicutes	Unlikely	+	neg
Levilactobacillus parabrevis	Firmicutes	Unlikely	+	neg
Levyella massiliensis	Firmicutes	Rare	+			neg
Ligilactobacillus acidipiscis	Firmicutes	Unlikely	+	neg	neg	neg	+
Ligilactobacillus agilis	Firmicutes	Rare	+			neg	neg
Ligilactobacillus animalis	Firmicutes	Minor	+			neg	neg						neg
Ligilactobacillus ceti	Firmicutes	Unlikely	+
Ligilactobacillus equi	Firmicutes	Unlikely	+	neg
Ligilactobacillus murinus	Firmicutes	Rare	+	neg		neg
Ligilactobacillus pobuzihii	Firmicutes	Unlikely	+	neg
Ligilactobacillus ruminis	Firmicutes	Widespread	+
Ligilactobacillus salivarius	Firmicutes	Widespread	+	neg		neg	neg						neg
Limnobacter thiooxidans	Proteobacteria	Unlikely	neg	+	+
Limnochorda pilosa	Firmicutes	Unlikely	neg	neg
Limosilactobacillus antri	Firmicutes	Rare	+			neg	neg
Limosilactobacillus caccae	Firmicutes	Rare	+	neg	neg
Limosilactobacillus coleohominis	Firmicutes	Unlikely	+	neg	neg	neg	vr						vr
Limosilactobacillus fermentum	Firmicutes	Widespread	+	vr		neg	+						neg
Limosilactobacillus frumenti	Firmicutes	Non	+	neg
Limosilactobacillus gastricus	Firmicutes	Unlikely	+			neg	neg
Limosilactobacillus ingluviei	Firmicutes	Non	+	neg
Limosilactobacillus mucosae	Firmicutes	Rare	+	neg		neg	neg
Limosilactobacillus oris	Firmicutes	Minor	+	neg		d	neg
Limosilactobacillus reuteri	Firmicutes	Minor	+			neg							neg
Limosilactobacillus vaginalis	Firmicutes	Rare	+	neg		neg	+					neg	neg						neg
Limosilactobacillus walteri	Firmicutes	Rare	+	neg
Liquorilactobacillus mali	Firmicutes	Unlikely	+	d(+)		neg
Liquorilactobacillus satsumensis	Firmicutes	Non	+	neg
Liquorilactobacillus vini	Firmicutes	Unlikely	+	neg
Listeria floridensis	Firmicutes	Rare	+	+
Listeria grayi	Firmicutes	Rare	+	+	neg	neg	neg			+
Listeria innocua	Firmicutes	Rare	+	+		neg	neg											neg	neg
Listeria ivanovii	Firmicutes	Rare	+	+	neg	neg	neg
Listeria marthii	Firmicutes	Rare	+	+	neg	neg
Listeria monocytogenes	Firmicutes	Rare	+	+		neg	neg						neg
Listeria seeligeri	Firmicutes	Rare	+	+	neg	neg	neg
Listeria welshimeri	Firmicutes	Rare	+	+	neg	neg	neg
Litchfieldia alkalitelluris	Firmicutes	Rare	+	+	+
Loigolactobacillus bifermentans	Firmicutes	Unlikely	+	neg		neg
Loigolactobacillus coryniformis	Firmicutes	Minor	+
Loigolactobacillus coryniformis subsp. torquens	Firmicutes	Unlikely	+	neg	neg
Longicatena caecimuris	Firmicutes	Rare	+
Lutispora thermophila	Firmicutes	Unlikely	neg	neg
Luxibacter massiliensis	Firmicutes	Rare	+	neg	+
Lysinibacillus boronitolerans	Firmicutes	Rare	+	+	+	+	+											neg	neg
Lysinibacillus fusiformis	Firmicutes	Rare	vr	+	+
Lysinibacillus macroides	Firmicutes	Unlikely	vr	+	neg	neg	neg											neg	neg
Lysinibacillus meyeri	Firmicutes	Unlikely	+	+	+	neg	neg			+
Lysinibacillus sphaericus	Firmicutes	Rare	+	+	+	neg	neg					neg						neg	neg
Lysinibacillus varians	Firmicutes	Rare	+	+	+
Lysinibacillus xylanilyticus	Firmicutes	Rare	+	+	+	neg	neg											neg	neg
Lysobacter soli	Proteobacteria	Rare	neg	+	+
Macellibacteroides fermentans	Bacteroidetes	Rare	+	neg		neg
Macrococcus caseolyticus	Firmicutes	Unlikely	+	+	+	neg			neg	d									neg
Mageeibacillus indolicus	Firmicutes	Rare	vr	neg	neg	neg
Mahella australiensis	Firmicutes	Unlikely	+
Mailhella massiliensis	Proteobacteria	Rare	neg	neg	neg
Mameliella alba	Proteobacteria	Unlikely	neg	d	d	+	neg											neg	neg
Mammaliicoccus fleurettii	Firmicutes	Rare	+	+	+	neg	neg		neg						neg		neg		neg
Mammaliicoccus lentus	Firmicutes	Rare	+	+		neg			neg
Mammaliicoccus sciuri	Firmicutes	Rare	+	+	+	neg	neg		neg	+					neg				neg
Mammaliicoccus vitulinus	Firmicutes	Unlikely	+	+	+	neg	neg		neg						neg				neg
Mannheimia granulomatis	Proteobacteria	Rare	neg	w	+	neg	neg											neg	neg
Mannheimia haemolytica	Proteobacteria	Rare	neg		+	neg	neg												neg
Mannheimia succiniciproducens	Proteobacteria	Rare	neg
Marasmitruncus massiliensis	Firmicutes	Rare	+
Marseilla massiliensis	Bacteroidetes	Rare	neg
Marseillibacter massiliensis	Firmicutes	Rare	neg	neg	neg
Marvinbryantia formatexigens	Firmicutes	Moderate	+	neg	neg	neg	neg						neg
Massilia aurea	Proteobacteria	Unlikely	neg	+	w	neg	neg											neg	neg
Massilia brevitalea	Proteobacteria	Non	neg	w	neg	+	neg											neg	neg
Massilia haematophila	Proteobacteria	Rare	neg		+	neg
Massilia norwichensis	Proteobacteria	Unlikely	neg	+	neg
Massilia timonae	Proteobacteria	Non	neg	+	+	neg	+											neg	neg
Massilia varians	Proteobacteria	Unlikely	neg			neg
Massilibacillus massiliensis	Firmicutes	Rare	+
Massilibacterium senegalense	Firmicutes	Rare	neg	neg	neg	neg
Massilicoli timonensis	Firmicutes	Rare	neg	neg	neg		neg
Massiliimalia massiliensis	Firmicutes	Rare	neg	neg	neg	neg
Massiliimalia timonensis	Firmicutes	Minor	+	neg	neg	neg
Massilimicrobiota timonensis	Firmicutes	Moderate	neg	neg	neg		+
Massilioclostridium coli	Firmicutes	Moderate	neg	neg	neg	neg
Massiliprevotella massiliensis	Bacteroidetes	Rare	neg	neg	neg									neg
Massilistercora timonensis	Firmicutes	Rare	neg	neg	neg	neg	+
Mediterranea massiliensis	Bacteroidetes	Rare	neg	neg	neg	neg
Mediterraneibacter faecis	Firmicutes	Minor	+	+	neg	neg	neg						neg
Mediterraneibacter glycyrrhizinilyticus	Firmicutes	Minor	+	neg		neg	neg						+
Mediterraneibacter massiliensis	Firmicutes	Rare	+	+	neg
Megalodesulfovibrio gigas	Proteobacteria	Unlikely	neg
Megamonas funiformis	Firmicutes	Minor	neg	neg		neg	neg						neg	neg
Megamonas hypermegale	Firmicutes	Moderate	neg	neg		neg	neg						neg
Megamonas rupellensis	Firmicutes	Rare	neg	neg	neg
Megasphaera cerevisiae	Firmicutes	Rare	neg	neg
Megasphaera elsdenii	Firmicutes	Moderate	neg	neg	neg	neg	neg						neg
Megasphaera indica	Firmicutes	Rare	neg	neg	neg
Megasphaera massiliensis	Firmicutes	Rare	neg	neg	+	neg	neg
Megasphaera micronuciformis	Firmicutes	Minor	neg	neg
Megasphaera stantonii	Firmicutes	Rare	neg	neg
Meiothermus silvanus	Deinococcus-Thermus	Unlikely	neg	neg	+
Merdibacter massiliensis	Firmicutes	Rare	neg	neg	neg
Merdimonas faecis	Firmicutes	Rare	+	neg	neg	neg	neg						+
Mesobacillus jeotgali	Firmicutes	Rare	vr	+	neg	+
Mesobacillus subterraneus	Firmicutes	Rare	neg	+	neg	neg	neg											neg	neg
Mesorhizobium australicum	Proteobacteria	Unlikely	neg
Mesorhizobium jarvisii	Proteobacteria	Unlikely	neg			+	neg
Mesorhizobium loti	Proteobacteria	Rare	neg	neg	neg	neg	neg
Mesorhizobium muleiense	Proteobacteria	Unlikely	neg	+	neg
Mesosutterella multiformis	Proteobacteria	Rare	neg			neg	neg
Metabacillus galliciensis	Firmicutes	Unlikely	+	+	+	neg	neg
Metabacillus idriensis	Firmicutes	Rare	+	+	+
Metabacillus litoralis	Firmicutes	Rare	vr	+		neg	neg											neg	neg
Metabacillus niabensis	Firmicutes	Rare	+	+	neg	+
Metakosakonia massiliensis	Proteobacteria	Rare	neg	+	neg	neg	neg
Metamycoplasma anseris	Tenericutes	Unlikely	unk
Metaprevotella massiliensis	Bacteroidetes	Rare	neg	neg	neg									neg
Methanobrevibacter arboriphilus	Euryarchaeota	Rare	+
Methanobrevibacter millerae	Euryarchaeota	Rare	+
Methanobrevibacter oralis	Euryarchaeota	Rare	+
Methanobrevibacter ruminantium	Euryarchaeota	Rare	+
Methanobrevibacter smithii	Euryarchaeota	Moderate	+
Methanococcus voltae	Euryarchaeota	Rare	neg
Methanomassiliicoccus intestinalis	Euryarchaeota	Rare	+
Methanomassiliicoccus luminyensis	Candidatus Thermoplasmatota	Rare	+
Methanomethylophilus alvus	Candidatus Thermoplasmatota	Rare
Methanosphaera stadtmanae	Euryarchaeota	Minor	+
Methylibium petroleiphilum	Proteobacteria	Unlikely	neg	neg	+
Methylobacterium adhaesivum	Proteobacteria	Unlikely	neg	+	w	+
Methylobacterium brachiatum	Proteobacteria	Unlikely	neg	+	+
Methylobacterium jeotgali	Proteobacteria	Non	neg	+	+	+	+			neg								neg	neg
Methylobacterium mesophilicum	Proteobacteria	Non	neg	+	vr	+	neg
Methylobacterium organophilum	Proteobacteria	Unlikely	neg	+	+
Methylobacterium oryzae	Proteobacteria	Unlikely	neg	+	+
Methylobacterium phyllosphaerae	Proteobacteria	Unlikely	neg	+	+	+	+
Methylobacterium radiotolerans	Proteobacteria	Non	neg	+	+	+	neg
Methylomusa anaerophila	Firmicutes	Unlikely	neg	neg	neg
Methylorubrum aminovorans	Proteobacteria	Rare	neg	+	+	+	neg
Methylorubrum extorquens	Proteobacteria	Non	neg	+	+	+	neg											neg	neg
Methylorubrum populi	Proteobacteria	Unlikely	neg	+	+	+
Methylorubrum thiocyanatum	Proteobacteria	Unlikely	neg	+	d	+	neg
Methylorubrum zatmanii	Proteobacteria	Unlikely	neg	+	+	+	neg											neg	neg
Methyloversatilis discipulorum	Proteobacteria	Rare	neg
Methyloversatilis universalis	Proteobacteria	Rare	neg	+	+	neg	neg
Microbacterium aurum	Actinobacteria	Rare	+	neg		neg	neg
Microbacterium chocolatum	Actinobacteria	Unlikely	+				neg
Microbacterium deminutum	Actinobacteria	Unlikely	+	+
Microbacterium esteraromaticum	Actinobacteria	Unlikely	+	+	neg	neg	neg
Microbacterium foliorum	Actinobacteria	Unlikely	+	+	neg	neg	neg
Microbacterium ginsengisoli	Actinobacteria	Non	+	+		neg	neg			+
Microbacterium gubbeenense	Actinobacteria	Unlikely	+	+	neg	neg	neg
Microbacterium hydrocarbonoxydans	Actinobacteria	Unlikely	+	+	neg	neg						neg	neg
Microbacterium kitamiense	Actinobacteria	Unlikely	+	+	neg
Microbacterium lacticum	Actinobacteria	Unlikely	+	vr		neg	neg						neg					neg	neg
Microbacterium liquefaciens	Actinobacteria	Unlikely	+	+		+	+
Microbacterium luteolum	Actinobacteria	Non	+	+	neg		neg
Microbacterium maritypicum	Actinobacteria	Unlikely	+				neg
Microbacterium mitrae	Actinobacteria	Unlikely	+	+	neg
Microbacterium natoriense	Actinobacteria	Unlikely	+	+	neg	neg
Microbacterium oleivorans	Actinobacteria	Unlikely	+	+	neg	neg						neg	neg
Microbacterium oxydans	Actinobacteria	Unlikely	+	+	neg	neg												neg
Microbacterium paraoxydans	Actinobacteria	Rare	+	+	neg	neg
Microbacterium phyllosphaerae	Actinobacteria	Unlikely	+	+	neg	neg	neg
Microbacterium saccharophilum	Actinobacteria	Unlikely	+	+	neg	neg
Microbacterium schleiferi	Actinobacteria	Unlikely	+	+	neg	neg	neg
Microbacterium sediminicola	Actinobacteria	Unlikely	+	+
Microbacterium testaceum	Actinobacteria	Non	+	+
Microbispora rosea	Actinobacteria	Rare	+
Micrococcus cohnii	Actinobacteria	Unlikely	+	+	+	+	neg
Micrococcus endophyticus	Actinobacteria	Unlikely	+	+	+
Micrococcus luteus	Actinobacteria	Minor	+	+		vr	neg											neg	neg
Micrococcus lylae	Actinobacteria	Rare	+	+		neg	neg						neg						neg
Micrococcus terreus	Actinobacteria	Rare	+	+	neg	neg	neg
Microlunatus phosphovorus	Actinobacteria	Unlikely	+	+	w
Micromonospora aurantiaca	Actinobacteria	Rare	+	+			+											+	+
Micropruina glycogenica	Actinobacteria	Rare	+	+	+
Microvirga aerophila	Proteobacteria	Unlikely	neg	+			neg
Microvirga massiliensis	Proteobacteria	Rare	neg	+	neg	neg
Microvirgula aerodenitrificans	Proteobacteria	Unlikely	neg	+	+	neg	+
Millionella massiliensis	Bacteroidetes	Rare	neg	+	neg
Miniphocaeibacter massiliensis	Firmicutes	Rare	+	+	neg
Mitsuokella jalaludinii	Firmicutes	Minor	neg	neg		neg
Mitsuokella multacida	Firmicutes	Moderate	neg	neg		neg							neg	neg
Mixta calida	Proteobacteria	Rare	neg	+	neg	neg	neg											neg	neg
Mixta intestinalis	Proteobacteria	Rare	neg	+	neg	neg				neg
Mobilibacterium massiliense	Firmicutes	Rare	neg	neg	neg
Mobilibacterium timonense	Firmicutes	Rare	neg	neg	neg
Mobilicoccus massiliensis	Actinobacteria	Rare	+	+	neg
Mobiluncus curtisii	Actinobacteria	Rare	vr	neg		neg							vr
Moellerella wisconsensis	Proteobacteria	Rare	neg		neg	neg	neg			neg								neg	neg
Mogibacterium diversum	Firmicutes	Rare	+	neg		neg
Mogibacterium neglectum	Firmicutes	Rare	+	neg		neg
Mogibacterium pumilum	Firmicutes	Rare	+	neg		neg
Mogibacterium timidum	Firmicutes	Rare	+	neg		neg	neg						neg
Mogibacterium vescum	Firmicutes	Unlikely	+	neg		neg
Monoglobus pectinilyticus	Firmicutes	Minor	+	+	neg	neg
Moorella glycerini	Firmicutes	Unlikely	+
Moraxella catarrhalis	Proteobacteria	Unlikely	neg	+	+	neg	neg			+		neg							neg
Moraxella osloensis	Proteobacteria	Unlikely	neg	+	+	neg	neg					vr							neg
Mordavella massiliensis	Firmicutes	Rare	neg	neg	neg
Morganella morganii	Proteobacteria	Minor	neg	+	neg	+	neg											d(+)	d(+)
Moryella indoligenes	Firmicutes	Rare	+	neg		neg	neg						neg
Mucispirillum schaedleri	Deferribacteres	Rare	neg	+	+
Murdochiella asaccharolytica	Firmicutes	Rare	+	neg		neg	+
Murdochiella massiliensis	Firmicutes	Rare	+	neg	neg
Murdochiella vaginalis	Firmicutes	Rare	+	neg		neg
Muribaculum gordoncarteri	Bacteroidetes	Unlikely	neg	neg	neg								+
Muribaculum intestinale	Bacteroidetes	Minor	neg	neg		neg
Murimonas intestini	Firmicutes	Rare	+
Mycobacterium abscessus	Actinobacteria	Unlikely	vr	+		+							neg
Mycobacterium avium	Actinobacteria	Unlikely	vr	+		neg
Mycobacterium avium subsp. paratuberculosis	Actinobacteria	Unlikely	vr	d		neg
Mycobacterium colombiense	Actinobacteria	Rare	vr	+		+
Mycobacterium florentinum	Actinobacteria	Rare	vr	vr		+
Mycobacterium fortuitum	Actinobacteria	Rare	vr	d		+							neg
Mycobacterium gastri	Actinobacteria	Rare	vr	w		+
Mycobacterium gordonae	Actinobacteria	Rare	vr	+
Mycobacterium interjectum	Actinobacteria	Rare	vr	+		+
Mycobacterium kansasii	Actinobacteria	Unlikely	vr	+
Mycobacterium lentiflavum	Actinobacteria	Rare	vr	+		neg
Mycobacterium simiae	Actinobacteria	Rare	vr	+		+
Mycobacterium terrae	Actinobacteria	Rare	vr	+
Mycobacterium tuberculosis	Actinobacteria	Non	vr	neg		+
Mycobacterium tuberculosis variant africanum	Actinobacteria	Non	vr	neg		+
Mycobacterium tuberculosis variant bovis	Actinobacteria	Unlikely	+	neg		+
Mycobacteroides abscessus subsp. bolletii	Actinobacteria	Unlikely	+			neg
Mycolicibacterium aubagnense	Actinobacteria	Non	+	+		neg	neg											neg	neg
Mycolicibacterium cosmeticum	Actinobacteria	Unlikely	vr
Mycolicibacterium houstonense	Actinobacteria	Rare	+	+
Mycolicibacterium mageritense	Actinobacteria	Unlikely	+	neg		d
Mycolicibacterium neoaurum	Actinobacteria	Rare	+			+
Mycoplasma hominis	Tenericutes	Rare	neg				+						neg
Mycoplasma muris	Tenericutes	Rare	neg			neg
Mycoplasma pneumoniae	Tenericutes	Rare	neg				+
Mycoplasmopsis arginini	Tenericutes	Unlikely	neg
Mycoplasmopsis californica	Tenericutes	Unlikely	neg
Myroides odoratimimus	Bacteroidetes	Unlikely	neg	+	+	+	neg
Myroides odoratus	Bacteroidetes	Unlikely	neg	+	+	+	neg
Nakamurella multipartita	Actinobacteria	Unlikely	+	+	neg
Nanosynbacter lyticus	Candidatus Saccharibacteria	Unlikely	+
Natronorubrum bangense	Euryarchaeota	Non	neg	+	+
Nautilia nitratireducens	Proteobacteria	Unlikely	neg	+
Ndongobacter massiliensis	Firmicutes	Unlikely	neg	neg	neg
Necropsobacter rosorum	Proteobacteria	Rare	neg	+	+	neg	neg											neg	neg
Negativibacillus massiliensis	Firmicutes	Minor	neg	neg	neg	neg
Negativicoccus massiliensis	Firmicutes	Rare	neg	neg	neg
Negativicoccus succinicivorans	Firmicutes	Rare	neg
Neglecta timonensis	Firmicutes	Rare	+	+	neg
Neisseria bacilliformis	Proteobacteria	Rare	neg	d	+			+
Neisseria canis	Proteobacteria	Rare	neg	+	+	neg		+		d									neg
Neisseria cinerea	Proteobacteria	Minor	neg	+	+	neg		+		neg		neg							neg
Neisseria elongata	Proteobacteria	Minor	neg	d	+	neg	neg	+		neg		neg						d	neg
Neisseria flava	Proteobacteria	Rare	neg	+	+	neg		+		neg									neg
Neisseria flavescens	Proteobacteria	Minor	neg	+	+	neg		+		neg		+							neg
Neisseria gonorrhoeae	Proteobacteria	Non	neg	+	+	neg		+				neg							neg
Neisseria lactamica	Proteobacteria	Rare	neg	+	+	neg		+		neg									neg
Neisseria macacae	Proteobacteria	Rare	neg	+	+	neg		+		+		+							neg
Neisseria meningitidis	Proteobacteria	Unlikely	neg	+	+	neg		+				+							neg
Neisseria mucosa	Proteobacteria	Rare	neg	+	+	neg	neg	+		neg		vr							neg
Neisseria oralis	Proteobacteria	Rare	neg	+	+			+				+						neg	neg
Neisseria perflava	Proteobacteria	Rare	neg	+	+	neg		+		neg		neg							neg
Neisseria polysaccharea	Proteobacteria	Rare	neg									neg
Neisseria shayeganii	Proteobacteria	Rare	neg	+	+	neg		+				+						neg	neg
Neisseria sicca	Proteobacteria	Rare	neg	+	+	neg		+		neg		d							neg
Neisseria subflava	Proteobacteria	Rare	neg	+	+	neg	neg	+		neg		neg							neg
Neoactinobaculum massilliense	Actinobacteria	Rare	+	+	neg
Neobacillus bataviensis	Firmicutes	Rare	+			neg	neg											neg	neg
Neobacillus fumarioli	Firmicutes	Unlikely	+	+		neg	neg											neg	neg
Neobacillus jeddahensis	Firmicutes	Rare	+	neg	+	neg	neg
Neobacillus massiliamazoniensis	Firmicutes	Rare	+	neg	+
Neobacillus niacini	Firmicutes	Rare	+	+	+	neg	neg											neg	neg
Neobacillus pocheonensis	Firmicutes	Unlikely	+			neg	neg											neg	neg
Neobacillus soli	Firmicutes	Rare	+			neg	neg											neg	neg
Neobittarella massiliensis	Firmicutes	Moderate	+	neg	neg
Neofamilia massiliensis	Firmicutes	Rare
Nesterenkonia massiliensis	Actinobacteria	Rare	+	+	neg	neg	neg
Nevskia ramosa	Proteobacteria	Unlikely	neg	w	neg	neg	neg
Niallia nealsonii	Firmicutes	Rare	+	+	neg	neg	neg											neg	neg
Niameybacter massiliensis	Firmicutes	Rare	+
Nigerium massiliense	Actinobacteria	Rare	+	+	neg
Nitriliruptor alkaliphilus	Actinobacteria	Unlikely	+	+	+
Nitrosomonas eutropha	Proteobacteria	Rare	neg
Nocardia asteroides	Actinobacteria	Rare	+	+
Nocardia brevicatena	Actinobacteria	Rare	+	+
Nocardia cyriacigeorgica	Actinobacteria	Rare	+	+
Nocardia mangyaensis	Actinobacteria	Unlikely	+	+	neg	+
Nocardia otitidiscaviarum	Actinobacteria	Rare	+	+
Nocardioides jensenii	Actinobacteria	Unlikely	+	+	neg	+				+
Nocardioides kribbensis	Actinobacteria	Unlikely	+	+	+	neg
Nocardioides massiliensis	Actinobacteria	Unlikely	+	+	neg	neg	neg
Nosocomiicoccus massiliensis	Firmicutes	Rare	+	+	neg	neg	neg
Noviherbaspirillum massiliense	Proteobacteria	Rare	neg	+	+	neg	+
Novosphingobium capsulatum	Proteobacteria	Unlikely	neg	+	+	neg	neg			+								neg	neg
Numidum massiliense	Firmicutes	Rare	+	+	neg	neg
Obesumbacterium proteus	Proteobacteria	Rare	neg
Oceanidesulfovibrio marinus	Proteobacteria	Unlikely	neg
Oceanithermus profundus	Deinococcus-Thermus	Unlikely	neg	+	+
Oceanobacillus caeni	Firmicutes	Rare	+	+	+	neg	neg											neg	neg
Oceanobacillus iheyensis	Firmicutes	Unlikely	+	+	vr	neg				neg
Oceanobacillus jeddahense	Firmicutes	Rare	+	+	+	neg
Oceanobacillus manasiensis	Firmicutes	Rare	+	neg	neg	neg	neg											neg	neg
Oceanobacillus massiliensis	Firmicutes	Rare	+	+	+	neg
Oceanobacillus oncorhynchi	Firmicutes	Non	+	+	+
Oceanobacillus picturae	Firmicutes	Unlikely	+	+		neg	neg											neg	neg
Oceanobacillus senegalensis	Firmicutes	Unlikely	+	+	+
Oceanobacillus sojae	Firmicutes	Rare	+	+	+	neg	neg											neg	neg
Oceanobacillus timonensis	Firmicutes	Unlikely	+	+
Ochrobactrum anthropi	Proteobacteria	Unlikely	neg	+	+	+	neg											neg	neg
Ochrobactrum intermedium	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Odoribacter laneus	Bacteroidetes	Minor	neg	neg	neg	neg	neg						+	neg
Odoribacter massiliensis	Bacteroidetes	Minor
Odoribacter splanchnicus	Bacteroidetes	Widespread	neg	+		neg	neg						vr
Oenococcus oeni	Firmicutes	Unlikely	+	neg
Oerskovia turbata	Actinobacteria	Rare	+	+	+	neg
Okadaella gastrococcus	Firmicutes	Rare	neg	neg	neg	neg
Olegusella massiliensis	Actinobacteria	Rare	+	neg	neg
Oleidesulfovibrio alaskensis	Proteobacteria	Rare	neg
Oleidesulfovibrio vietnamensis	Proteobacteria	Rare	neg
Oligella urethralis	Proteobacteria	Rare	neg	+	+	neg	neg											neg	neg
Olsenella congonensis	Actinobacteria	Rare	+	neg	neg
Olsenella massiliensis	Actinobacteria	Rare	+	neg		neg
Olsenella phocaeensis	Actinobacteria	Rare	+	neg	neg
Olsenella profusa	Actinobacteria	Rare	+	neg		neg	+						neg	+
Olsenella timonensis	Actinobacteria	Rare	+	neg	neg
Olsenella uli	Actinobacteria	Rare	+	neg		neg	+			neg			neg	neg
Olsenella urininfantis	Actinobacteria	Rare	+	neg	neg
Oribacterium asaccharolyticum	Firmicutes	Rare	vr	neg	neg	neg
Oribacterium parvum	Firmicutes	Rare	vr	neg	neg	neg
Oribacterium sinus	Firmicutes	Minor	vr	neg		neg	neg						neg
Ornithinibacillus contaminans	Firmicutes	Unlikely	+	+	+
Ornithinibacillus massiliensis	Firmicutes	Rare	+
Ornithobacterium rhinotracheale	Bacteroidetes	Rare	neg	neg	+	+	d			neg								neg	neg
Oscillibacter massiliensis	Firmicutes	Rare	neg
Oscillibacter ruminantium	Firmicutes	Rare	neg	neg
Oscillibacter valericigenes	Firmicutes	Minor	neg	neg
Oscillospira guillermondii	Firmicutes	Rare	+
Ottowia massiliensis	Pseudomonadota	Rare	neg	neg	neg
Oxalobacter formigenes	Proteobacteria	Moderate	neg
Pacaella massiliensis	Synergistetes	Rare	neg	neg	neg
Paenarthrobacter aurescens	Actinobacteria	Rare	+		+
Paenarthrobacter ilicis	Actinobacteria	Non	+	+	neg	+
Paenibacillus alvei	Firmicutes	Unlikely	+	vr	neg		neg											neg	neg
Paenibacillus amylolyticus	Firmicutes	Rare	+	+	neg	neg												neg	neg
Paenibacillus anaericanus	Firmicutes	Rare	neg	+	+	neg	neg											neg	neg
Paenibacillus antibioticophila	Firmicutes	Rare	+	neg	neg	neg	neg						+
Paenibacillus azoreducens	Firmicutes	Rare	vr	+	neg	neg
Paenibacillus barcinonensis	Firmicutes	Unlikely	+	+	neg	neg
Paenibacillus barengoltzii	Firmicutes	Unlikely	+	+	+	neg	neg					neg						neg	neg
Paenibacillus borealis	Firmicutes	Unlikely	neg	+	neg							neg
Paenibacillus bouchesdurhonensis	Firmicutes	Rare	neg	+	neg	neg
Paenibacillus chibensis	Firmicutes	Unlikely	+	+	neg	neg
Paenibacillus chitinolyticus	Firmicutes	Rare	vr	+	vr
Paenibacillus cineris	Firmicutes	Rare	vr	+	+	neg
Paenibacillus cookii	Firmicutes	Unlikely	vr	+	+	neg	neg											neg	neg
Paenibacillus daejeonensis	Firmicutes	Rare	vr	+	+	neg
Paenibacillus dendritiformis	Firmicutes	Rare	neg	+	+	+
Paenibacillus donghaensis	Firmicutes	Unlikely	+	neg	neg	neg	neg											neg	neg
Paenibacillus durus	Firmicutes	Rare	+	neg	neg	neg
Paenibacillus faecis	Firmicutes	Rare	+	+	+	neg	neg
Paenibacillus favisporus	Firmicutes	Rare	vr	+	+	+												neg
Paenibacillus glucanolyticus	Firmicutes	Rare	neg	+	+
Paenibacillus graminis	Firmicutes	Unlikely	+	+	neg
Paenibacillus ihuae	Firmicutes	Rare	+	+	neg
Paenibacillus ihumii	Firmicutes	Rare	neg	neg	neg	neg
Paenibacillus illinoisensis	Firmicutes	Rare	+	+	neg
Paenibacillus jamilae	Firmicutes	Rare	vr	+	neg
Paenibacillus kribbensis	Firmicutes	Rare	vr	+	neg	neg
Paenibacillus lactis	Firmicutes	Rare	neg	+	+	neg	neg											neg	neg
Paenibacillus larvae	Firmicutes	Rare	+	neg		neg	d
Paenibacillus lautus	Firmicutes	Rare	vr	+	neg	neg	neg											neg	neg
Paenibacillus macerans	Firmicutes	Rare	+	+
Paenibacillus motobuensis	Firmicutes	Rare	neg	+	+
Paenibacillus mucilaginosus	Firmicutes	Unlikely	neg	+	d
Paenibacillus naphthalenovorans	Firmicutes	Unlikely	+	+		+	neg											neg	neg
Paenibacillus odorifer	Firmicutes	Unlikely	+	+	neg
Paenibacillus pabuli	Firmicutes	Rare	+	+	neg	neg												neg	neg
Paenibacillus pasadenensis	Firmicutes	Rare	+	+	+
Paenibacillus phocaensis	Firmicutes	Rare	neg	+	+	neg
Paenibacillus polymyxa	Firmicutes	Rare	neg	+	neg
Paenibacillus provencensis	Firmicutes	Rare	neg	+	neg	neg	neg
Paenibacillus pueri	Firmicutes	Rare	+	+	+	neg	neg											+	+
Paenibacillus rhizosphaerae	Firmicutes	Unlikely	+	+	+	neg	neg											neg	neg
Paenibacillus riograndensis	Firmicutes	Unlikely	vr	+	neg	neg
Paenibacillus rubinfantis	Firmicutes	Rare	neg	+	neg	neg
Paenibacillus sabinae	Firmicutes	Rare	+	+	neg
Paenibacillus senegalensis	Firmicutes	Rare	neg
Paenibacillus senegalimassiliensis	Firmicutes	Rare	vr	neg	neg	neg
Paenibacillus stellifer	Firmicutes	Unlikely	+	+	neg							neg
Paenibacillus thiaminolyticus	Firmicutes	Unlikely	+	+	+	neg												neg	neg
Paenibacillus timonensis	Firmicutes	Rare	+	+	+
Paenibacillus tuaregi	Firmicutes	Rare	vr	+	neg	neg
Paenibacillus typhae	Firmicutes	Rare	+	+	neg	neg	neg											neg	neg
Paenibacillus urinalis	Firmicutes	Rare	neg	+	neg	neg	neg
Paenibacillus xylanilyticus	Firmicutes	Rare	+	+	neg	neg	neg											neg	neg
Paeniclostridium ghonii	Firmicutes	Rare	+	neg	neg	neg
Paeniclostridium sordellii	Firmicutes	Minor	+	+	neg	+	vr						neg
Paenisporosarcina quisquiliarum	Firmicutes	Unlikely	+	+	+		+
Paludibacter jiangxiensis	Bacteroidetes	Rare	neg	neg
Paludibacter propionicigenes	Bacteroidetes	Unlikely	neg	neg	neg	neg
Paludibaculum fermentans	Acidobacteria	Unlikely	neg	+	neg	neg
Paludicola psychrotolerans	Firmicutes	Rare	+	neg	neg
Pannonibacter phragmitetus	Proteobacteria	Unlikely	neg	+	+	+	+
Pantoea agglomerans	Proteobacteria	Minor	neg		neg	neg	neg					+						neg	neg
Pantoea conspicua	Proteobacteria	Rare	neg		neg	neg												neg	neg
Pantoea eucalypti	Proteobacteria	Rare	neg			neg
Pantoea rodasii	Proteobacteria	Unlikely	neg	+	neg	neg	neg											neg	neg
Pantoea septica	Proteobacteria	Rare	neg		neg	neg												neg	neg
Pantoea vagans	Proteobacteria	Rare	neg		neg	neg
Papillibacter cinnamivorans	Firmicutes	Rare	+
Parabacteroides bouchesdurhonensis	Bacteroidetes	Minor	neg	+	neg
Parabacteroides chinchillae	Bacteroidetes	Minor	neg	neg		neg	neg						+
Parabacteroides distasonis	Bacteroidetes	Widespread	neg	+		neg	neg						vr	neg
Parabacteroides faecis	Bacteroidetes	Rare	neg	+		neg	neg						+	+
Parabacteroides goldsteinii	Bacteroidetes	Moderate	neg			neg	neg						neg	+
Parabacteroides gordonii	Bacteroidetes	Minor	neg	vr		neg	neg						neg	neg
Parabacteroides johnsonii	Bacteroidetes	Moderate	neg	+		neg	neg						+
Parabacteroides massiliensis	Bacteroidetes	Rare	neg	neg	neg	neg
Parabacteroides merdae	Bacteroidetes	Widespread	neg	neg		neg	neg						vr
Parabacteroides pacaensis	Bacteroidetes	Rare	neg	+	neg	neg
Parabacteroides pekinense	Bacteroidetes	Rare	neg		neg
Parabacteroides provencensis	Bacteroidetes	Rare	neg	+	neg
Parabacteroides timonensis	Bacteroidetes	Minor	neg	+	neg
Paraburkholderia fungorum	Proteobacteria	Rare	neg	d	d	neg	neg			neg								neg	neg
Paraburkholderia phytofirmans	Proteobacteria	Unlikely	neg		+	neg	neg			neg									neg
Paracholeplasma brassicae	Tenericutes	Unlikely	neg
Paraclostridium benzoelyticum	Firmicutes	Rare	+	neg	neg	neg
Paraclostridium bifermentans	Firmicutes	Moderate	+	neg	neg	neg	neg						neg
Paracoccus aminovorans	Proteobacteria	Rare	neg	+	+	neg
Paracoccus carotinifaciens	Proteobacteria	Unlikely	neg	+	+	neg	neg
Paracoccus denitrificans	Proteobacteria	Rare	neg			neg	neg											neg	neg
Paracoccus haeundaensis	Proteobacteria	Unlikely	neg	+	+		neg											neg	neg
Paracoccus marcusii	Proteobacteria	Non	neg	+	+
Paracoccus marinus	Proteobacteria	Unlikely	neg	+	+
Paracoccus sphaerophysae	Proteobacteria	Unlikely	neg	+	+	+
Paracoccus yeei	Proteobacteria	Rare	neg	+	+	+	neg											neg	neg
Paraeggerthella hongkongensis	Actinobacteria	Rare	+	+		neg	+						neg	neg
Parafannyhessea umbonata	Actinobacteria	Unlikely	+	neg	neg	neg	+						neg
Paraliobacillus quinghaiensis	Firmicutes	Non	+	+	+	neg
Paramuribaculum intestinale	Bacteroidetes	Rare	neg
Paraprevotella clara	Bacteroidetes	Moderate	neg	neg		neg	neg						neg	neg
Paraprevotella xylaniphila	Bacteroidetes	Moderate	neg	neg		neg	neg						neg
Pararheinheimera texasensis	Proteobacteria	Rare	neg	+	+
Parascardovia denticolens	Actinobacteria	Rare	+	neg
Parasphingorhabdus flavimaris	Proteobacteria	Unlikely	neg	+	+
Parasporobacterium paucivorans	Firmicutes	Rare	neg
Parasutterella excrementihominis	Proteobacteria	Moderate	neg	neg	neg	neg	neg						neg
Parasutterella secunda	Proteobacteria	Rare	neg	neg	neg	neg	+						neg
Paratractidigestivibacter faecalis	Actinobacteria	Rare	+	neg	neg	neg	neg						neg	neg
Paremcibacter congregatus	Proteobacteria	Unlikely	neg	w	+		neg
Parolsenella catena	Actinobacteria	Rare	+	neg		neg	neg						neg
Parolsenella massiliensis	Actinobacteria	Rare	+	neg		neg	neg						neg
Parvibacter caecicola	Actinobacteria	Rare	+			neg	neg						neg
Parvimonas micra	Firmicutes	Moderate	+	neg		neg	neg						vr
Pasteurella aerogenes	Proteobacteria	Rare	neg	+	d	+	neg											neg
Pasteurella dagmatis	Proteobacteria	Rare	neg	+	+	+	neg											neg	neg
Pasteurella multocida	Proteobacteria	Rare	neg	+	+	neg	neg											neg	+
Paucilactobacillus oligofermentans	Firmicutes	Non	+
Paucilactobacillus suebicus	Firmicutes	Unlikely	+	neg
Paucilactobacillus vaccinostercus	Firmicutes	Unlikely	+	neg
Paucisalibacillus globulus	Firmicutes	Unlikely	+	+	neg	neg				+
Pauljensenia bouchesdurhonensis	Actinobacteria	Minor	+	neg
Pauljensenia cellulosilytica	Actinobacteria	Rare	+	neg
Pauljensenia hongkongensis	Actinobacteria	Rare	+	neg		neg	+
Pauljensenia keddieii	Actinobacteria	Minor	+	neg
Pauljensenia odontolyticus	Actinobacteria	Rare	+	neg
Pauljensenia turicensis	Actinobacteria	Rare	+	neg
Pectobacterium wasabiae	Proteobacteria	Unlikely	neg	+	neg	neg	neg											neg	neg
Pediococcus acidilactici	Firmicutes	Rare	+	pseudo(vr)	neg	neg	+						neg						neg
Pediococcus claussenii	Firmicutes	Rare
Pediococcus damnosus	Firmicutes	Unlikely	+
Pediococcus pentosaceus	Firmicutes	Minor	+	pseudo(d(+))	neg	neg	+											neg	neg
Pedobacter cryoconitis	Proteobacteria	Non	neg	+	+	neg	neg
Pedobacter daejeonensis	Proteobacteria	Unlikely	neg	+	neg	neg	neg
Pedobacter panaciterrae	Bacteroidetes	Unlikely	neg	+	+	neg	neg											neg	neg
Pedobacter terricola	Bacteroidetes	Non	neg	+	+	neg	neg											neg	neg
Pedomicrobium ferrugineum	Proteobacteria	Rare	neg	+
Pelistega indica	Proteobacteria	Rare	neg	neg	+	neg				neg
Pelobacter propionicus	Proteobacteria	Rare	neg	neg	neg
Pelomonas aquatica	Proteobacteria	Rare	neg
Pelomonas puraquae	Proteobacteria	Rare	neg
Pelomonas saccharophila	Proteobacteria	Rare	neg	+	+	neg	neg
Peptacetobacter hiranonis	Firmicutes	Minor	+	neg
Peptoclostridium acidaminophilum	Firmicutes	Unlikely	+
Peptococcus niger	Firmicutes	Rare	+	neg
Peptoniphilus asaccharolyticus	Firmicutes	Minor	+			neg	vr		neg				neg
Peptoniphilus catoniae	Firmicutes	Rare	+	neg		neg	neg						neg
Peptoniphilus colimassiliensis	Firmicutes	Rare	+	neg	neg
Peptoniphilus duerdenii	Firmicutes	Rare	+	neg		neg	w						neg
Peptoniphilus gorbachii	Firmicutes	Rare	+	neg		neg			neg
Peptoniphilus grossensis	Firmicutes	Rare	+	neg	neg	neg	neg						neg
Peptoniphilus harei	Firmicutes	Minor	+	+		neg	neg		neg				neg
Peptoniphilus indolicus	Firmicutes	Rare	+	neg		neg	neg		+
Peptoniphilus ivorii	Firmicutes	Rare	+	d		neg	neg		neg
Peptoniphilus koenoeneniae	Firmicutes	Rare	+	neg		neg	+						neg
Peptoniphilus lacrimalis	Firmicutes	Minor	+			neg	neg		neg				neg
Peptoniphilus obesi	Firmicutes	Rare	+	neg	neg	neg	neg						neg
Peptoniphilus pacaensis	Firmicutes	Rare	+	neg	neg	neg
Peptoniphilus phoceensis	Firmicutes	Rare	+	+	neg
Peptoniphilus senegalensis	Firmicutes	Rare	+	+		neg	neg						neg
Peptoniphilus timonensis	Firmicutes	Rare	+	+	neg	neg	neg						neg
Peptostreptococcus anaerobius	Firmicutes	Moderate	+	neg		neg	neg						neg
Peptostreptococcus russellii	Firmicutes	Rare	+	neg		neg	neg		neg
Peptostreptococcus stomatis	Firmicutes	Minor	+	neg		neg	neg						neg
Peribacillus psychrosaccharolyticus	Firmicutes	Unlikely	vr		d
Peribacillus simplex	Firmicutes	Rare	vr	+	neg	neg	neg											neg	neg
Petrimonas mucosa	Bacteroidetes	Unlikely	neg	+	w
Petrimonas sulfuriphila	Bacteroidetes	Rare	neg
Petrobacter succinatimandens	Proteobacteria	Rare	neg	+	+
Petrocella atlantisensis	Firmicutes	Unlikely	+
Phascolarctobacterium faecium	Firmicutes	Minor	neg	neg		neg
Phascolarctobacterium succinatutens	Firmicutes	Moderate	neg	neg	neg	neg	neg						+
Phenylobacterium falsum	Proteobacteria	Unlikely	neg	+	+	+				neg
Phenylobacterium haematophilum	Proteobacteria	Rare	neg
Phenylobacterium lituiforme	Proteobacteria	Unlikely	neg	+	neg
Phocaeicola barnesiae	Bacteroidetes	Moderate	neg	neg		neg	neg						neg
Phocaeicola coprocola	Bacteroidetes	Widespread	neg	neg		neg	neg						+
Phocaeicola coprophilus	Bacteroidetes	Widespread	neg			neg	neg						neg
Phocaeicola dorei	Bacteroidetes	Widespread	neg			neg	neg						+	nr
Phocaeicola massiliensis	Bacteroidetes	Minor	neg	neg		neg	neg						neg
Phocaeicola paurosaccharolyticus	Bacteroidetes	Rare	neg	neg	neg	neg
Phocaeicola plebeius	Bacteroidetes	Widespread	neg	neg		neg	d						+
Phocaeicola salanitronis	Bacteroidetes	Minor	neg	neg		neg	neg						neg
Phocaeicola sartorii	Bacteroidetes	Moderate	neg	neg		neg	neg						neg
Phocaeicola vulgatus	Bacteroidetes	Widespread	neg	neg		neg	neg						d	+
Phocea massiliensis	Firmicutes	Minor	neg	neg	neg
Phoenicibacter congonensis	Actinobacteria	Rare	+	neg	neg	+
Phyllobacterium myrsinacearum	Proteobacteria	Rare	neg	+	+	neg	neg											neg	neg
Pigmentiphaga kullae	Proteobacteria	Rare	neg	+	+							neg
Planococcus massiliensis	Firmicutes	Unlikely	+	neg	+	neg	neg
Planococcus rifietoensis	Firmicutes	Unlikely	+	+	+	neg
Planomicrobium chinense	Firmicutes	Unlikely	+	+	neg
Planomicrobium koreense	Firmicutes	Unlikely	+	+	neg	neg
Planomicrobium okeanokoites	Firmicutes	Unlikely	+	+	w	neg	+											+	+
Plesiomonas shigelloides	Proteobacteria	Rare	neg	+	+	neg	+					neg						+	+
Pluralibacter gergoviae	Proteobacteria	Rare	neg		neg	+	neg			neg								d(+)	+
Pontibacillus litoralis	Firmicutes	Rare	+	+	+			neg										neg	neg
Porphyromonas asaccharolytica	Bacteroidetes	Minor	neg	neg		neg	vr						neg	neg		neg
Porphyromonas bennonis	Bacteroidetes	Rare	neg	d		neg	neg
Porphyromonas cangingivalis	Bacteroidetes	Unlikely	neg	+										+		neg
Porphyromonas canoris	Bacteroidetes	Rare	neg	+												neg
Porphyromonas crevioricanis	Bacteroidetes	Unlikely	neg	d		neg	neg						neg
Porphyromonas endodontalis	Bacteroidetes	Minor	neg	neg		neg	neg						neg	neg		neg
Porphyromonas gingivalis	Bacteroidetes	Unlikely	neg	neg		neg	vr		+				neg	neg		+
Porphyromonas levii	Bacteroidetes	Rare	neg	neg
Porphyromonas macacae	Bacteroidetes	Rare	neg	+												neg
Porphyromonas somerae	Bacteroidetes	Minor	neg	neg		neg	neg						neg
Porphyromonas uenonis	Bacteroidetes	Minor	neg	neg		neg	neg						neg
Pragia fontium	Proteobacteria	Rare	neg	+	neg	neg				neg								neg	neg
Prevotella albensis	Bacteroidetes	Rare	neg			neg	neg						neg	neg
Prevotella amnii	Bacteroidetes	Rare	neg	neg
Prevotella aurantiaca	Bacteroidetes	Rare	neg	neg		neg	neg						neg	neg
Prevotella baroniae	Bacteroidetes	Rare	neg	neg										neg
Prevotella bergensis	Bacteroidetes	Moderate	neg	neg
Prevotella bivia	Bacteroidetes	Moderate	neg	neg		neg	neg						neg	neg
Prevotella brevis	Bacteroidetes	Minor	neg											neg
Prevotella bryantii	Bacteroidetes	Rare	neg			neg	neg						neg	neg
Prevotella buccae	Bacteroidetes	Minor	neg	neg		neg	neg						neg	neg
Prevotella buccalis	Bacteroidetes	Minor	neg											neg
Prevotella conceptionensis	Bacteroidetes	Rare	neg
Prevotella copri	Bacteroidetes	Widespread	neg	neg		neg	neg						neg	neg
Prevotella corporis	Bacteroidetes	Moderate	neg	neg		neg	+						neg	neg
Prevotella dentalis	Bacteroidetes	Minor	neg			neg	neg						neg	neg
Prevotella dentasini	Bacteroidetes	Rare	neg	neg		neg
Prevotella denticola	Bacteroidetes	Minor	neg	neg		neg	neg						neg	neg
Prevotella disiens	Bacteroidetes	Minor	neg	neg		neg	neg						neg	neg
Prevotella enoeca	Bacteroidetes	Rare	neg			neg	neg						neg	neg
Prevotella falsenii	Bacteroidetes	Rare
Prevotella fusca	Bacteroidetes	Unlikely	neg	neg
Prevotella herbatica	Bacteroidetes	Unlikely	neg
Prevotella histicola	Bacteroidetes	Rare	neg	neg		neg	neg						neg
Prevotella ihumii	Bacteroidetes	Rare	neg	neg	neg
Prevotella intermedia	Bacteroidetes	Minor	neg	neg		neg	neg						neg	neg
Prevotella jejuni	Bacteroidetes	Rare	neg			neg	neg						neg
Prevotella lascolaii	Bacteroidetes	Minor	neg	neg	+
Prevotella loescheii	Bacteroidetes	Rare	neg	neg		neg	neg						neg	neg
Prevotella maculosa	Bacteroidetes	Rare	neg	neg		neg	neg						neg
Prevotella marseillensis	Bacteroidetes	Rare	neg	neg	neg
Prevotella marshii	Bacteroidetes	Rare	neg	neg		neg								neg
Prevotella melaninogenica	Bacteroidetes	Moderate	neg	neg		neg	d						neg	neg
Prevotella merdae	Bacteroidetes	Rare	neg
Prevotella micans	Bacteroidetes	Rare	neg	neg		neg
Prevotella multiformis	Bacteroidetes	Rare	neg	neg		neg								neg
Prevotella multisaccharivorax	Bacteroidetes	Minor	neg	neg		neg								neg
Prevotella nanceiensis	Bacteroidetes	Rare	neg	neg		neg	neg						neg
Prevotella nigrescens	Bacteroidetes	Minor	neg	neg		neg	neg						neg	neg
Prevotella oralis	Bacteroidetes	Minor	neg	neg		neg	neg						neg	neg
Prevotella oris	Bacteroidetes	Moderate	neg	neg										neg
Prevotella oryzae	Bacteroidetes	Unlikely	neg	neg	neg	neg	neg						neg	neg
Prevotella oulorum	Bacteroidetes	Rare	neg											+
Prevotella pallens	Bacteroidetes	Rare	neg			neg	vr						neg	neg
Prevotella paludivivens	Bacteroidetes	Rare	neg	neg	neg	neg
Prevotella phocaeensis	Bacteroidetes	Rare	neg	neg	neg
Prevotella pleuritidis	Bacteroidetes	Rare	neg	neg		neg	neg						neg	neg
Prevotella rara	Bacteroidetes	Rare	neg	neg		neg
Prevotella rectalis	Bacteroidetes	Rare	neg	+	neg		neg
Prevotella ruminicola	Bacteroidetes	Minor	neg	neg										neg
Prevotella saccharolytica	Bacteroidetes	Rare	neg	neg
Prevotella salivae	Bacteroidetes	Rare	neg	neg		neg								neg
Prevotella scopos	Bacteroidetes	Unlikely	neg	neg
Prevotella seregens	Bacteroidetes	Rare
Prevotella shahii	Bacteroidetes	Rare	neg	neg		neg								neg
Prevotella stercorea	Bacteroidetes	Moderate	neg	neg		neg	vr						neg	neg
Prevotella timonensis	Bacteroidetes	Minor	neg	neg		neg	neg						neg	neg
Prevotella veroralis	Bacteroidetes	Minor	neg	neg		neg	neg						neg	neg
Prevotellamassilia timonensis	Bacteroidetes	Minor	neg	neg	neg
Priestia flexa	Firmicutes	Rare	vr		neg
Priestia koreensis	Firmicutes	Unlikely	+	+	neg	+
Priestia megaterium	Firmicutes	Rare	+	+	neg	neg	neg											neg	neg
Prochlorococcus marinus	Cyanobacteria	Rare	neg
Prolixibacter bellariivorans	Bacteroidetes	Unlikely	neg	neg	neg	neg	neg
Propionibacterium acidifaciens	Actinobacteria	Rare	+	neg		neg
Propionibacterium freudenreichii	Actinobacteria	Rare	+	+		neg	neg						neg
Propionimicrobium lymphophilum	Actinobacteria	Rare	neg	d
Prosthecobacter fluviatilis	Verrucomicrobia	Rare	neg
Proteiniphilum saccharofermentans	Bacteroidetes	Unlikely	neg	+	w
Proteus mirabilis	Proteobacteria	Moderate	neg	+	neg	+	neg						+					neg	+
Proteus penneri	Proteobacteria	Rare	neg	+	neg	+	neg											neg	neg
Proteus vulgaris	Proteobacteria	Rare	neg	+	neg	+	neg						+					neg	+
Provencibacterium massiliense	Firmicutes	Moderate	neg	neg	neg
Providencia alcalifaciens	Proteobacteria	Minor	neg	+	neg	neg	neg											neg	neg
Providencia heimbachae	Proteobacteria	Rare	neg	+	neg	neg	neg			neg								neg	neg
Providencia rettgeri	Proteobacteria	Minor	neg	+	neg	+				neg			+					neg	neg
Providencia rustigianii	Proteobacteria	Rare	neg		neg	neg	neg			neg								neg	neg
Providencia stuartii	Proteobacteria	Rare	neg		neg	neg	neg											neg	neg
Pseudarthrobacter oxydans	Actinobacteria	Rare	+
Pseudarthrobacter polychromogenes	Actinobacteria	Unlikely	vr	+		neg
Pseudescherichia vulneris	Proteobacteria	Rare	neg	+	neg		d(neg)			neg								+	neg
Pseudobutyrivibrio ruminis	Firmicutes	Rare	neg	neg
Pseudobutyrivibrio xylanivorans	Firmicutes	Unlikely	neg	neg						+
Pseudochrobactrum asaccharolyticum	Proteobacteria	Rare	neg		+							neg
Pseudochrobactrum saccharolyticum	Proteobacteria	Rare	neg		+							neg
Pseudocitrobacter anthropi	Proteobacteria	Rare	neg		neg	neg	neg											w	w
Pseudocitrobacter faecalis	Proteobacteria	Rare	neg	+	neg	neg	neg					+						d	d
Pseudoclavibacter alba	Actinobacteria	Rare	+	+	neg	neg
Pseudoclavibacter helvolus	Actinobacteria	Unlikely	+	+	w
Pseudoclavibacter sp. Timone	Actinobacteria	Rare	+	+	neg
Pseudoclostridium thermosuccinogenes	Firmicutes	Unlikely	neg
Pseudodesulfovibrio aespoeensis	Proteobacteria	Unlikely	neg
Pseudodesulfovibrio indicus	Proteobacteria	Unlikely	neg
Pseudoflavonifractor capillosus	Firmicutes	Moderate	neg			neg	neg						neg
Pseudoglutamicibacter albus	Actinobacteria	Rare	+	+
Pseudoglutamicibacter cumminsii	Actinobacteria	Unlikely	+	+		d
Pseudomonas aeruginosa	Proteobacteria	Rare	neg	+	+	vr	+					+						neg	neg
Pseudomonas alcaligenes	Proteobacteria	Non	neg	+	+		+
Pseudomonas alcaliphila	Proteobacteria	Rare	neg	+	+	neg	+
Pseudomonas asiatica	Proteobacteria	Rare	neg	+	+	neg	+
Pseudomonas asplenii	Proteobacteria	Unlikely	neg		+		+
Pseudomonas boreopolis	Proteobacteria	Non	neg	+	neg	neg	neg
Pseudomonas caricapapayae	Proteobacteria	Non	neg	+		neg
Pseudomonas chlororaphis	Proteobacteria	Non	neg	+
Pseudomonas citronellolis	Proteobacteria	Rare	neg	+	+
Pseudomonas fluorescens	Proteobacteria	Unlikely	neg	+	+	neg	vr											neg	neg
Pseudomonas fragi	Proteobacteria	Rare	neg	+
Pseudomonas fulva	Proteobacteria	Rare	neg	+	+		+
Pseudomonas gessardii	Proteobacteria	Non	neg	+	+	neg			neg	neg	neg	+				neg		neg	neg
Pseudomonas japonica	Proteobacteria	Non	neg	+	+		neg
Pseudomonas libanensis	Proteobacteria	Non	neg	+	+	+	+		neg	neg								neg	neg
Pseudomonas lundensis	Proteobacteria	Non	neg	+	+	d	+											neg	neg
Pseudomonas luteola	Proteobacteria	Unlikely	neg	+	neg	d	+					neg						neg	neg
Pseudomonas massiliensis	Proteobacteria	Non	neg	neg	neg	neg
Pseudomonas mendocina	Proteobacteria	Rare	neg	+	+		+
Pseudomonas migulae	Proteobacteria	Non	neg	+	+	neg			neg	neg	neg	+						neg	neg
Pseudomonas monteilii	Proteobacteria	Unlikely	neg	+	+	neg	+		neg	neg		+						neg	neg
Pseudomonas mosselii	Proteobacteria	Non	neg	+	+		+		neg	neg	d	+					neg	neg	neg
Pseudomonas nitroreducens	Proteobacteria	Unlikely	neg	+	+	neg	+												neg
Pseudomonas oleovorans	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Pseudomonas oryzihabitans	Proteobacteria	Unlikely	neg	+	neg	+	neg											neg	neg
Pseudomonas parafulva	Proteobacteria	Unlikely	neg	+	+		+
Pseudomonas protegens	Proteobacteria	Unlikely	neg		+		+
Pseudomonas putida Biovar A	Proteobacteria	Rare	neg	+	+	neg	+												neg
Pseudomonas putida Biovar B	Proteobacteria	Rare	neg	+	+	neg	+												neg
Pseudomonas rhodesiae	Proteobacteria	Non	neg	+	+	d	+		neg	neg	neg	d						neg	neg
Pseudomonas saudiphocaensis	Proteobacteria	Rare	neg	+	+
Pseudomonas straminea	Proteobacteria	Unlikely	neg	+	+		neg
Pseudomonas stutzeri	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Pseudomonas taetrolens	Proteobacteria	Non	neg	+
Pseudomonas tolaasii	Proteobacteria	Unlikely	neg	+	+		+
Pseudomonas veronii	Proteobacteria	Rare	neg									+
Pseudomonas weihenstephanensis	Proteobacteria	Unlikely	neg	+	+
Pseudomonas xanthomarina	Proteobacteria	Non	neg	+	+	neg	neg			neg								neg	neg
Pseudomonas yamanorum	Proteobacteria	Unlikely	neg	+	+	neg	+											neg	neg
Pseudomonas zhaodongensis	Proteobacteria	Unlikely	neg	+	+
Pseudonocardia dioxanivorans	Actinobacteria	Unlikely	+
Pseudoprevotella muciniphila	Bacteroidetes	Rare	neg			neg	+						+
Pseudopropionibacterium massiliense	Actinobacteria	Rare	+	neg	neg
Pseudoramibacter alactolyticus	Firmicutes	Rare	+	neg
Pseudoruegeria marinistellae	Proteobacteria	Rare	neg	+	+
Pseudoruminococcus massiliensis	Firmicutes	Rare	neg	neg	neg	neg
Pseudoxanthomonas broegbernensis	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Pseudoxanthomonas japonensis	Proteobacteria	Unlikely	neg	neg	+	neg	neg											neg	neg
Pseudoxanthomonas mexicana	Proteobacteria	Rare	neg	+	+	neg	neg			+								neg	neg
Pseudoxanthomonas spadix	Proteobacteria	Rare	neg	+	+	neg	neg											neg	neg
Pseudoxanthomonas suwonensis	Proteobacteria	Rare	neg	+	+		neg
Pseudoxanthomonas taiwanensis	Proteobacteria	Rare	neg	+	+
Psychrobacter alimentarius	Proteobacteria	Unlikely	+	+	+		neg											neg	neg
Psychrobacter arenosus	Proteobacteria	Unlikely	neg	+	+	neg	neg
Psychrobacter cibarius	Proteobacteria	Unlikely	neg	+	+	neg
Psychrobacter faecalis	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Psychrobacter fulvigenes	Proteobacteria	Rare	neg	+	+	+	neg
Psychrobacter maritimus	Proteobacteria	Unlikely	neg	+	+	+	neg
Psychrobacter namhaensis	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Psychrobacter phenylpyruvicus	Proteobacteria	Rare	neg	+	+	+	neg			neg			neg					neg	neg
Psychrobacter pulmonis	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Pusillimonas faecalis	Firmicutes	Rare	neg
Pygmaiobacter massiliensis	Firmicutes	Minor	+	neg	neg
Pyramidobacter piscolens	Synergistetes	Minor	neg	neg		neg	neg						neg
Rahnella aquatilis	Proteobacteria	Unlikely	neg	+	neg	neg	neg						+					neg	neg
Ralstonia mannitolilytica	Proteobacteria	Rare	neg	+	+	+	neg											neg	neg
Ralstonia pickettii Biovar Va-1&2	Proteobacteria	Rare	neg	+	+	+	neg											neg	neg
Raoultella ornithinolytica	Proteobacteria	Minor	neg	+	neg	+	neg											+	+
Raoultella planticola	Proteobacteria	Rare	neg	+	neg	+	neg											+	neg
Raoultella terrigena	Proteobacteria	Rare	neg	+	neg	neg	neg			neg								+	neg
Raoultibacter massiliensis	Actinobacteria	Rare	+	+	neg	neg
Raoultibacter timonensis	Actinobacteria	Rare	+	+	neg	neg
Rheinheimera perlucida	Proteobacteria	Unlikely	neg	+	+	neg	neg
Rhizobium metallidurans	Proteobacteria	Unlikely	neg
Rhizorhabdus wittichii	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Rhodanobacter ginsenosidimutans	Proteobacteria	Unlikely	neg	+	+	neg	neg
Rhodococcus erythropolis	Actinobacteria	Rare	+	+		+	neg											neg	neg
Rhodococcus hoagii	Actinobacteria	Rare	+
Rhodococcus jostii	Actinobacteria	Non	+	+		neg
Rhodococcus opacus	Actinobacteria	Unlikely	+	+	neg
Rhodococcus qingshengii	Actinobacteria	Unlikely	+	+	neg	+
Rhodococcus rhodochrous	Actinobacteria	Rare	+	+		d	neg											neg	neg
Rhodoplanes serenus	Proteobacteria	Unlikely	neg
Rhodothermus marinus	Bacteroidetes	Non	neg	+	neg
Riemerella columbina	Bacteroidetes	Rare	neg	+	+	d(+)	neg
Rikenella microfusus	Bacteroidetes	Rare	neg	neg		neg							+
Risungbinella massiliensis	Firmicutes	Rare	+	+	+
Robertmurraya andreesenii	Firmicutes	Unlikely	+	+	neg
Robertmurraya kyonggiensis	Firmicutes	Rare	+	+	+
Robertmurraya massiliosenegalensis	Firmicutes	Rare	+	+	neg	neg
Robinsoniella peoriensis	Firmicutes	Rare	+			neg	neg						neg
Romboutsia hominis	Firmicutes	Rare	+	neg		neg
Romboutsia ilealis	Firmicutes	Rare	vr	neg		neg
Romboutsia lituseburensis	Firmicutes	Minor	+	neg		neg
Romboutsia maritimum	Firmicutes	Rare	+
Romboutsia timonensis	Firmicutes	Moderate	+	neg	neg
Romboutsia weinsteinii	Firmicutes	Rare	+
Roseburia faecis	Firmicutes	Widespread	vr	neg		neg	neg						neg
Roseburia hominis	Firmicutes	Widespread	vr	neg		neg	neg						neg
Roseburia intestinalis	Firmicutes	Widespread	vr	neg		neg	neg						neg
Roseburia inulinivorans	Firmicutes	Widespread	vr	neg		neg	neg						neg
Roseobacter denitrificans	Proteobacteria	Non	neg	+	+
Roseomonas gilardii	Proteobacteria	Rare	neg	+	neg	+	neg											neg	neg
Roseomonas mucosa	Proteobacteria	Rare	neg	+	d(neg)	+	neg
Rossellomorea aquimaris	Firmicutes	Unlikely	vr	+	neg	neg
Rossellomorea marisflavi	Firmicutes	Rare	vr	+	neg	neg
Rossellomorea vietnamensis	Firmicutes	Rare	+	+	+	neg	neg
Rothia aeria	Actinobacteria	Minor	+	+		neg	neg						neg
Rothia dentocariosa	Actinobacteria	Minor	+	vr	neg	neg	neg						neg					neg	neg
Rothia halotolerans	Actinobacteria	Unlikely	+	+	neg	neg
Rothia koreensis	Actinobacteria	Rare	+	+	neg	+	+
Rothia kristinae	Actinobacteria	Rare	+	+	d(+)	vr	+
Rothia mucilaginosa	Actinobacteria	Moderate	+	d(+)	neg	neg	neg		neg	neg			neg						neg
Rothia terrae	Actinobacteria	Rare	+	+		neg
Rubeoparvulum massiliense	Firmicutes	Rare	neg	neg	+	+
Rubinisphaera brasiliensis	Planctomycetes	Non	neg	+	+
Rubneribacter badeniensis	Actinobacteria	Minor	+	neg	neg	neg	+						neg
Rubrobacter xylanophilus	Actinobacteria	Non	+	+	+					neg
Rudanella lutea	Bacteroidetes	Unlikely	neg			neg	neg
Ruminiclostridium cellobioparum	Firmicutes	Rare	vr
Ruminiclostridium cellulolyticum	Firmicutes	Unlikely	+	neg	neg	neg
Ruminiclostridium herbifermentans	Firmicutes	Unlikely	vr	neg	neg
Ruminiclostridium josui	Firmicutes	Rare	+
Ruminococcus albus	Firmicutes	Moderate	+	neg		neg	neg						neg
Ruminococcus bicirculans	Firmicutes	Moderate	+
Ruminococcus bovis	Firmicutes	Unlikely	+	neg	neg
Ruminococcus bromii	Firmicutes	Widespread	+	neg
Ruminococcus callidus	Firmicutes	Widespread	+	neg
Ruminococcus champanellensis	Firmicutes	Moderate	+	neg	neg	neg	neg						neg
Ruminococcus flavefaciens	Firmicutes	Moderate	+	neg		neg	+						+
Ruminococcus gauvreauii	Firmicutes	Minor	+	neg	neg	neg	neg						neg
Ruminococcus gnavus	Firmicutes	Widespread	+	neg		neg	neg						neg
Ruminococcus lactaris	Firmicutes	Widespread	+	neg		neg
Ruminococcus phoceensis	Firmicutes	Rare	+	+	neg
Ruminococcus torques	Firmicutes	Widespread	+	neg			+
Rummeliibacillus pycnus	Firmicutes	Unlikely	+	+	neg
Rummeliibacillus stabekisii	Firmicutes	Rare	+		neg
Rummeliibacillus suwonensis	Firmicutes	Rare	+	+	+	neg	neg
Ruoffia tabacinasalis	Firmicutes	Rare	+	neg	neg	neg	neg
Ruthenibacterium lactatiformans	Firmicutes	Moderate	neg	neg		neg
Saccharibacillus brassicae	Firmicutes	Unlikely	+	+
Saccharofermentans acetigenes	Firmicutes	Non	+	neg	neg	neg
Salimicrobium jeotgali	Firmicutes	Non	+	+	+	+	+
Salinicoccus halodurans	Firmicutes	Unlikely	+	+	+	+
Salinisphaera halophila	Proteobacteria	Non	neg	+	neg	neg	neg
Salinivibrio costicola	Proteobacteria	Rare	neg	+	+													neg	neg
Salmonella bongori	Proteobacteria	Rare	neg			neg						+
Salmonella enterica	Proteobacteria	Unlikely	neg		neg	neg	+					+						w	+
Salmonella enterica subsp. arizonae	Proteobacteria	Non	neg		neg	neg	d(+)			neg		neg						+	+
Salmonella enterica subsp. enterica serovar Choleraesuis	Proteobacteria	Unlikely	neg		neg	neg	d			neg		+						+	+
Salmonella enterica subsp. enterica serovar Enteritidis	Proteobacteria	Rare	neg		neg	neg	d(+)			neg		+						+	neg
Salmonella enterica subsp. enterica serovar Paratyphi A	Proteobacteria	Rare	neg		neg	neg	d(+)			neg		+						neg	+
Salmonella enterica subsp. enterica serovar Typhi	Proteobacteria	Rare	neg		neg	neg	d(+)			neg		+						+	+
Salmonella enterica subsp. enterica serovar Typhimurium	Proteobacteria	Rare	neg		neg	neg	d(+)			neg		d						+	+
Sanguibacter massiliensis	Actinobacteria	Rare	+	+	neg
Sarcina maxima	Firmicutes	Rare	+	neg
Sarcina ventriculi	Firmicutes	Minor	+	neg
Scardovia inopinata	Actinobacteria	Rare	+	neg
Scardovia wiggsiae	Actinobacteria	Minor	+	neg		neg	neg						neg
Schaalia cardiffensis	Actinobacteria	Rare	+	neg		neg	neg						neg	neg
Schaalia hyovaginalis	Actinobacteria	Rare	+	neg
Schaalia meyeri	Actinobacteria	Rare	+	neg		d
Schaalia odontolytica	Actinobacteria	Moderate	+	neg	neg				neg
Schaalia radingae	Actinobacteria	Rare	+	neg		neg
Schaalia turicensis	Actinobacteria	Rare	+	neg		neg
Schleiferilactobacillus harbinensis	Firmicutes	Unlikely	+	neg
Schleiferilactobacillus perolens	Firmicutes	Unlikely	+	neg		neg
Schleiferilactobacillus shenzhenensis	Firmicutes	Unlikely
Schlesneria paludicola	Planctomycetes	Unlikely	neg	+	+	neg
Schnuerera ultunensis	Firmicutes	Unlikely	+	neg	neg
Sebaldella termitidis	Fusobacteria	Unlikely	neg			neg
Sediminibacillus massiliensis	Firmicutes	Rare	+	+	+
Sediminispirochaeta smaragdinae	Spirochaetes	Unlikely	neg
Selenomonas artemidis	Firmicutes	Rare	neg	neg		neg	neg
Selenomonas bovis	Firmicutes	Rare	neg
Selenomonas flueggei	Firmicutes	Rare	neg
Selenomonas infelix	Firmicutes	Rare	neg
Selenomonas noxia	Firmicutes	Rare	neg	neg		neg	neg
Selenomonas ruminantium	Firmicutes	Minor	neg	neg		neg	neg						neg
Selenomonas sputigena	Firmicutes	Rare	neg	neg		+	neg
Selenomonas timonae	Firmicutes	Unlikely	neg
Sellimonas intestinalis	Firmicutes	Minor	+	neg	neg	neg	neg						+
Senegalia massiliensis	Firmicutes	Rare	+
Senegalimassilia anaerobia	Actinobacteria	Minor	+	neg	neg		+
Senegalimassilia faecalis	Actinobacteria	Rare	+	+	neg		+
Serratia ficaria	Proteobacteria	Rare	neg	+	neg	neg	neg											neg	neg
Serratia fonticola	Proteobacteria	Rare	neg		neg	neg	neg			neg								+	+
Serratia liquefaciens	Proteobacteria	Rare	neg	+	vr	neg	neg			+								+	+
Serratia marcescens	Proteobacteria	Minor	neg	+	neg	neg	neg											+	+
Serratia odorifera	Proteobacteria	Rare	neg	+	neg	neg	neg			+								+	d
Serratia quinivorans	Proteobacteria	Rare	neg	+	neg	neg												+	+
Serratia ureilytica	Proteobacteria	Rare	neg	+	neg	+	+											+	+
Sharpea azabuensis	Firmicutes	Rare	+	neg
Shewanella algae	Proteobacteria	Unlikely	neg	+	+	d	neg			+									+
Shewanella carassii	Proteobacteria	Rare	neg	+	+	neg	neg					neg						neg	neg
Shewanella decolorationis	Proteobacteria	Rare	neg	+	+
Shewanella xiamenensis	Proteobacteria	Rare	neg	+	+	neg	neg
Shigella boydii	Proteobacteria	Rare	neg	+	neg	neg	d											neg	neg
Shigella dysenteriae	Proteobacteria	Unlikely	neg	d	neg	neg	neg											neg	neg
Shigella flexneri	Proteobacteria	Minor	neg	+	neg	neg	neg											neg	neg
Shigella sonnei	Proteobacteria	Minor	neg		neg	neg	neg											neg	+
Shuttleworthia satelles	Firmicutes	Rare	+	neg		neg	neg						neg
Silanimonas lenta	Proteobacteria	Non	neg	+	+
Skermanella aerolata	Proteobacteria	Unlikely	neg	+	+	+	neg
Slackia equolifaciens	Actinobacteria	Rare	+	neg		neg	+						neg	neg
Slackia exigua	Actinobacteria	Rare	+	neg		neg	+						neg	neg
Slackia faecicanis	Actinobacteria	Rare	+	neg		neg	+						neg	neg
Slackia heliotrinireducens	Actinobacteria	Rare	+	neg		neg	+						neg	neg
Slackia isoflavoniconvertens	Actinobacteria	Rare	+			neg	+						neg	neg
Slackia piriformis	Actinobacteria	Minor	+	neg	neg	neg	+						neg	neg
Sneathia sanguinegens	Fusobacteria	Rare	neg	neg	neg	neg	neg						neg
Sneathia vaginalis	Fusobacteria	Rare	neg	neg
Sodaliphilus pleomorphus	Bacteroidetes	Rare	neg
Soleaferrea massiliensis	Firmicutes	Rare	+	neg	+
Solibacillus silvestris	Firmicutes	Unlikely	+	+	neg		neg
Solibaculum mannosilyticum	Firmicutes	Rare	vr	neg		neg
Solobacterium moorei	Firmicutes	Minor	+			neg	vr						neg
Sorangium cellulosum	Proteobacteria	Rare	neg
Sphaerotilus natans	Proteobacteria	Unlikely	neg	+	d		d											neg	neg
Sphingobacterium alimentarium	Bacteroidetes	Unlikely	neg	+	+	neg	neg											neg	neg
Sphingobacterium faecium	Bacteroidetes	Rare	neg	+	+	+				+
Sphingobacterium mizutaii	Bacteroidetes	Unlikely	neg	+	+	neg	neg											neg	neg
Sphingobacterium multivorum	Bacteroidetes	Rare	neg	+	+	+	neg			+								neg	neg
Sphingobacterium nematocida	Bacteroidetes	Unlikely	neg	+	+	neg	neg											neg	neg
Sphingobacterium siyangense	Bacteroidetes	Rare	neg	+	+	+	+											neg	neg
Sphingobacterium spiritivorum	Bacteroidetes	Rare	neg	+	+	+	neg			+		d(neg)						neg	neg
Sphingobacterium thalpophilum	Bacteroidetes	Unlikely	neg	+	+	+	neg											neg	neg
Sphingobium xenophagum	Proteobacteria	Unlikely	neg	+	+							+
Sphingomonas adhaesiva	Proteobacteria	Unlikely	neg	+	neg	neg	neg			+			neg					neg	neg
Sphingomonas aerolata	Proteobacteria	Non	neg	+	+					w		+
Sphingomonas aestuarii	Proteobacteria	Unlikely	neg	+	+	neg	neg
Sphingomonas azotifigens	Proteobacteria	Rare	neg	+	+		neg			+
Sphingomonas bisphenolicum	Proteobacteria	Unlikely	neg	+	+
Sphingomonas echinoides	Proteobacteria	Unlikely	neg	+	+	neg	neg
Sphingomonas glacialis	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Sphingomonas hankookensis	Proteobacteria	Rare	neg	+	+		neg											neg	neg
Sphingomonas koreensis	Proteobacteria	Unlikely	neg	+	+	neg	neg
Sphingomonas melonis	Proteobacteria	Rare	neg		+	neg	neg											neg	neg
Sphingomonas panni	Proteobacteria	Rare	neg	+	neg	neg	neg						neg
Sphingomonas paucimobilis	Proteobacteria	Rare	neg	+	neg	neg	neg			neg								neg	neg
Sphingomonas pseudosanguinis	Proteobacteria	Rare	neg		+	neg	neg						+
Sphingomonas sinipercae	Proteobacteria	Unlikely	neg	+	+					+
Sphingomonas yabuuchiae	Proteobacteria	Rare	neg	+	neg
Sphingopyxis bauzanensis	Proteobacteria	Unlikely	neg	+	+	neg	neg											neg	neg
Spiribacter roseus	Proteobacteria	Non	neg	+	+	+
Spirochaeta coccoides	Spirochaetes	Rare	neg	neg
Spirochaeta thermophila	Spirochaetes	Non	neg
Spirosoma linguale	Bacteroidetes	Unlikely	neg	+		neg												neg
Sporobacter termitidis	Firmicutes	Rare	+
Sporolactobacillus laevolacticus	Firmicutes	Unlikely	+	+	neg
Sporolactobacillus nakayamae subsp. racemicus	Firmicutes	Rare	+	neg	neg
Sporomusa termitida	Firmicutes	Unlikely	neg	+	neg
Sporosarcina aquimarina	Firmicutes	Non	+	+	+	+
Sporosarcina koreensis	Firmicutes	Unlikely	+	+	+	+	neg
Sporosarcina luteola	Firmicutes	Rare	vr	+	+	neg	neg			neg								neg	neg
Sporosarcina siberiensis	Firmicutes	Unlikely	+	+	+	neg	neg
Stackebrandtia nassauensis	Actinobacteria	Unlikely	+	+
Staphylococcus arlettae	Firmicutes	Rare	+	+	neg	neg	neg		neg	neg	neg				neg		neg		neg
Staphylococcus aureus subsp. aureus	Firmicutes	Minor	+	+	neg	+	vr		+		+				+		+	neg	neg
Staphylococcus auricularis	Firmicutes	Rare	+	+	neg	neg	vr		neg	neg					neg		neg		neg
Staphylococcus capitis subsp. capitis	Firmicutes	Rare	+	+	neg	neg	+		neg	w			neg		neg				neg
Staphylococcus caprae	Firmicutes	Rare	+	+	neg	+	+		neg	+	neg				neg		neg		neg
Staphylococcus carnosus	Firmicutes	Rare	+	+	neg	neg	+		neg							neg
Staphylococcus cohnii subsp. cohnii	Firmicutes	Rare	+	+	neg	neg	neg		neg						neg				neg
Staphylococcus condimenti	Firmicutes	Rare	+	+		+	+		neg										neg
Staphylococcus devriesei	Firmicutes	Rare	+	+	neg	d	+		neg
Staphylococcus epidermidis	Firmicutes	Widespread	+	+	neg	+	vr		neg	w	d		neg		neg		d		neg
Staphylococcus equorum subsp. equorum	Firmicutes	Rare	+	+	neg	vr			neg		neg				neg		neg		neg
Staphylococcus gallinarum	Firmicutes	Rare	+	+	neg	+			neg						neg		neg
Staphylococcus haemolyticus	Firmicutes	Minor	+	+	neg	neg	+		neg	neg					neg				neg
Staphylococcus hominis subsp. hominis	Firmicutes	Minor	+	+	neg	vr	vr		neg	neg									neg
Staphylococcus hyicus	Firmicutes	Rare	+	+	neg	+	+		d		d				+	neg	+
Staphylococcus intermedius	Firmicutes	Rare	+	+	neg	+	vr		+	+	neg				+				neg
Staphylococcus kloosii	Firmicutes	Rare	+	+	neg	+	neg		neg	neg	neg				neg		neg		neg
Staphylococcus lugdunensis	Firmicutes	Rare	+	+	neg	d	neg		neg		neg				neg				+
Staphylococcus nepalensis	Firmicutes	Rare	+	+	neg	+	neg		neg						neg		neg		neg
Staphylococcus pasteuri	Firmicutes	Minor	+	+	neg	+	d		neg	neg	neg				neg				neg
Staphylococcus petrasii	Firmicutes	Rare	+	+	neg	+	+		neg	w							neg		neg
Staphylococcus pettenkoferi	Firmicutes	Rare	+	+		+	neg		neg	neg									neg
Staphylococcus pseudintermedius	Firmicutes	Rare	+	+		+	+		+	+
Staphylococcus saccharolyticus	Firmicutes	Rare	+	+	neg	vr	vr		neg				neg						neg
Staphylococcus saprophyticus subsp. saprophyticus	Firmicutes	Rare	+	+	neg	d	d		neg	neg									neg
Staphylococcus schleiferi subsp. schleiferi	Firmicutes	Rare	+	+	neg	neg	+		neg						+				neg
Staphylococcus simiae	Firmicutes	Rare	+	+	neg	+	d		neg						neg				neg
Staphylococcus simulans	Firmicutes	Rare	+	+	neg	+	vr		neg	w					d				neg
Staphylococcus succinus subsp. succinus	Firmicutes	Unlikely	+	+	neg	+	neg												neg
Staphylococcus warneri	Firmicutes	Minor	+	+	neg	+	d		neg	d					neg				neg
Staphylococcus xylosus	Firmicutes	Rare	+	+	neg	+	neg		neg	neg					neg				neg
Starkeya novella	Proteobacteria	Unlikely	neg
Stenotrophomonas acidaminiphila	Proteobacteria	Unlikely	neg	+	+
Stenotrophomonas bentonitica	Proteobacteria	Unlikely	neg	+	neg
Stenotrophomonas maltophilia	Proteobacteria	Minor	neg	+	neg	neg	neg											+	neg
Stenotrophomonas rhizophila	Proteobacteria	Rare	neg		+	neg	neg
Stomatobaculum longum	Firmicutes	Minor	vr	neg	neg	neg
Streptobacillus hongkongensis	Fusobacteria	Rare	neg	neg	neg
Streptobacillus moniliformis	Fusobacteria	Unlikely	neg	neg	neg
Streptococcus acidominimus	Firmicutes	Unlikely	+	neg		neg
Streptococcus agalactiae	Firmicutes	Minor	+	neg		neg	+					neg	neg				d		neg
Streptococcus alactolyticus	Firmicutes	Rare	+	neg		d	neg						neg
Streptococcus anginosus	Firmicutes	Widespread	+	neg		neg	vr						neg				d(neg)
Streptococcus anginosus subsp. whileyi	Firmicutes	Rare	+	neg		neg											+
Streptococcus australis	Firmicutes	Minor	+	neg		neg	vr						neg
Streptococcus caballi	Firmicutes	Rare	+	neg		neg
Streptococcus canis	Firmicutes	Unlikely	+	neg			+				neg						neg
Streptococcus castoreus	Firmicutes	Rare	+	neg		neg	+
Streptococcus constellatus subsp. constellatus	Firmicutes	Minor	+	neg		neg											d(+)
Streptococcus cristatus	Firmicutes	Minor	+	neg		neg	vr						neg				neg
Streptococcus danieliae	Firmicutes	Rare	+	neg		neg	neg						neg
Streptococcus didelphis	Firmicutes	Rare	+	+			d(+)
Streptococcus downei	Firmicutes	Rare	+	neg
Streptococcus dysgalactiae	Firmicutes	Rare	+	neg		neg	+						neg				+
Streptococcus dysgalactiae subsp. equisimilis	Firmicutes	Unlikely	+	neg							+						+
Streptococcus equi subsp. equi	Firmicutes	Rare	+	neg		neg	+						neg
Streptococcus equinus	Firmicutes	Moderate	+	neg		neg	neg						neg
Streptococcus ferus	Firmicutes	Rare	+	neg
Streptococcus gallolyticus subsp. gallolyticus	Firmicutes	Minor	+	neg		vr	neg
Streptococcus gordonii	Firmicutes	Minor	+	neg		neg	vr						neg				neg
Streptococcus gwangjuense	Firmicutes	Unlikely	+	neg
Streptococcus henryi	Firmicutes	Rare	+	neg		neg
Streptococcus hyovaginalis	Firmicutes	Rare	+	neg		neg	neg
Streptococcus ilei	Firmicutes	Unlikely	+			neg	+						+			+
Streptococcus infantarius	Firmicutes	Minor	+	neg		neg	neg						neg
Streptococcus infantarius subsp. infantarius	Firmicutes	Minor	+	neg			neg
Streptococcus infantis	Firmicutes	Minor	+	neg		neg	neg						neg
Streptococcus intermedius	Firmicutes	Moderate	+	neg		neg											+
Streptococcus koreensis	Firmicutes	Unlikely	+				+
Streptococcus lactarius	Firmicutes	Rare	+				+
Streptococcus lutetiensis	Firmicutes	Minor	+	neg		neg	neg						neg
Streptococcus macedonicus	Firmicutes	Rare	+			neg	neg
Streptococcus merionis	Firmicutes	Rare	+	neg	neg	neg	+
Streptococcus mitis	Firmicutes	Moderate	+	neg		neg	neg						neg				neg
Streptococcus mutans	Firmicutes	Moderate	+	neg		neg	neg						neg				neg
Streptococcus oralis	Firmicutes	Minor	+	neg		neg	neg			neg			neg				neg	neg
Streptococcus oralis subsp. tigurinus	Firmicutes	Rare	+	neg		neg
Streptococcus orisratti	Firmicutes	Rare	+	neg
Streptococcus ovis	Firmicutes	Rare	+	neg	neg	neg	d
Streptococcus pantholopis	Firmicutes	Rare	+	neg		+
Streptococcus parasanguinis	Firmicutes	Widespread	+	neg		neg	vr						neg				neg
Streptococcus parasuis	Firmicutes	Rare	+	neg		neg
Streptococcus parauberis	Firmicutes	Rare	+	neg		neg	+
Streptococcus pasteurianus	Firmicutes	Minor	+	neg		neg	neg
Streptococcus periodonticum	Firmicutes	Unlikely	+				w
Streptococcus peroris	Firmicutes	Rare	+	neg		neg	neg
Streptococcus pluranimalium	Firmicutes	Unlikely	+	neg		neg	d(neg)
Streptococcus plurextorum	Firmicutes	Rare	+	neg	neg	neg
Streptococcus pneumoniae	Firmicutes	Minor	+	neg		neg	vr						neg				+
Streptococcus porci	Firmicutes	Rare	+	neg		neg
Streptococcus pseudopneumoniae	Firmicutes	Minor	+	neg		neg	neg						neg
Streptococcus pseudoporcinus	Firmicutes	Rare	+	neg		neg
Streptococcus pyogenes	Firmicutes	Minor	+	neg		neg	+						neg				+
Streptococcus rubneri	Firmicutes	Rare	+	neg
Streptococcus salivarius	Firmicutes	Widespread	+	neg		d	neg						neg				neg
Streptococcus sanguinis	Firmicutes	Moderate	+	neg		neg	vr						neg				neg	neg	neg
Streptococcus sinensis	Firmicutes	Rare	+	neg		neg												neg	neg
Streptococcus sobrinus	Firmicutes	Minor	+	neg		neg											neg
Streptococcus suis	Firmicutes	Rare	+	neg		neg	+						neg				d		+
Streptococcus thermophilus	Firmicutes	Widespread	+	neg		neg				neg
Streptococcus thoraltensis	Firmicutes	Rare	+	neg		neg	+						neg
Streptococcus timonensis	Firmicutes	Minor	+	neg	neg		neg
Streptococcus uberis	Firmicutes	Rare	+	neg		neg	+			neg			neg				+
Streptococcus vestibularis	Firmicutes	Moderate	+	neg		+	neg						neg				neg
Streptococcus viridans	Firmicutes	Rare	+	neg
Streptomyces albus	Actinobacteria	Unlikely	+	+		d(+)
Streptomyces flavogriseus	Actinobacteria	Unlikely	+	+
Streptomyces hygroscopicus	Actinobacteria	Unlikely	+	+
Streptomyces koyangensis	Actinobacteria	Rare	+
Streptomyces lividans	Actinobacteria	Unlikely	+
Streptomyces massiliensis	Actinobacteria	Unlikely	+	+	+
Streptomyces misionensis	Actinobacteria	Rare	+
Streptomyces specialis	Actinobacteria	Unlikely	+	+
Streptomyces thermoviolaceus	Actinobacteria	Rare	+	+			neg											neg	neg
Streptomyces thermovulgaris	Actinobacteria	Unlikely	+			+	+											+	+
Streptomyces violaceusniger	Actinobacteria	Unlikely	+	+
Streptosporangium roseum	Actinobacteria	Unlikely	+
Subdoligranulum formicile	Firmicutes	Rare	neg	neg		neg
Subdoligranulum variabile	Firmicutes	Moderate	neg	neg		neg	neg						neg
Succinatimonas hippei	Proteobacteria	Minor	neg	neg	neg	neg	neg						neg
Succinivibrio dextrinosolvens	Proteobacteria	Rare	neg	neg		vr
Sulfurospirillum deleyianum	Proteobacteria	Rare	neg	neg	+
Sutcliffiella cohnii	Firmicutes	Unlikely	+	+	+
Sutterella faecalis	Proteobacteria	Rare	neg	+	neg	neg	neg						neg
Sutterella massiliensis	Proteobacteria	Rare	neg	neg	neg
Sutterella megalosphaeroides	Proteobacteria	Rare	neg	neg	neg	neg	neg						neg	neg
Sutterella parvirubra	Proteobacteria	Minor	neg	neg	neg	neg	neg
Sutterella seckii	Proteobacteria	Rare	neg		neg
Sutterella stercoricanis	Proteobacteria	Rare	neg	neg	neg	neg	neg					neg	neg						neg
Sutterella timonensis	Proteobacteria	Rare	neg	neg	neg
Sutterella wadsworthensis	Proteobacteria	Widespread	neg	neg	neg	neg	vr						neg
Symbiobacterium thermophilum	Firmicutes	Unlikely	neg	+
Symbiobacterium toebii	Firmicutes	Unlikely	neg
Syntrophobotulus glycolicus	Firmicutes	Unlikely	neg
Syntrophococcus sucromutans	Firmicutes	Rare	neg
Syntrophomonas zehnderi	Firmicutes	Rare	vr
Tannerella forsythia	Bacteroidetes	Minor	neg
Tannerella serpentiformis	Bacteroidetes	Unlikely	neg			neg	neg						neg
Taonella mepensis	Proteobacteria	Unlikely	neg	+	+	neg	neg
Tatumella ptyseos	Proteobacteria	Rare	neg	+	neg	neg	d			neg								neg	neg
Tepidanaerobacter acetatoxydans	Firmicutes	Rare	vr
Tepiditoga spiralis	Thermotogae	Unlikely	neg
Terrahaemophilus aromaticivorans	Proteobacteria	Rare	neg
Terribacillus aidingensis	Firmicutes	Rare	+	neg	+	+	neg											neg	neg
Terribacillus halophilus	Firmicutes	Unlikely	+	+	neg	neg	neg											neg	neg
Terrisporobacter glycolicus	Firmicutes	Minor	+
Terrisporobacter mayombei	Firmicutes	Rare	+	neg	neg
Terrisporobacter othiniensis	Firmicutes	Rare	+
Terrisporobacter petrolearius	Firmicutes	Rare	+	neg		neg
Tessaracoccus massiliensis	Actinobacteria	Rare	+	+	neg
Tetragenococcus halophilus	Firmicutes	Unlikely	+	neg	neg
Tetragenococcus koreensis	Firmicutes	Rare	+		neg	+
Tetragenococcus solitarius	Firmicutes	Rare	+	neg	neg		+
Thalassobacillus devorans	Firmicutes	Non	+		neg
Thauera terpenica	Proteobacteria	Rare	neg
Thermaerobacter marianensis	Firmicutes	Non	vr
Thermoanaerobacterium thermosaccharolyticum	Firmicutes	Rare	neg	neg
Thermobacillus composti	Firmicutes	Unlikely	neg	+	+
Thermobispora bispora	Actinobacteria	Unlikely	+
Thermoclostridium stercorarium	Firmicutes	Unlikely	neg			neg
Thermolithobacter ferrireducens	Firmicutes	Non	+
Thermomonas carbonis	Proteobacteria	Unlikely	neg			neg	neg			neg
Thermomonospora curvata	Actinobacteria	Unlikely	+	+	neg
Thermophilibacter immobilis	Actinobacteria	Unlikely	+
Thermophilibacter mediterraneus	Actinobacteria	Rare	+	neg	neg
Thermophilibacter provencensis	Actinobacteria	Minor	+	neg	neg
Thermus scotoductus	Deinococcus-Thermus	Unlikely	neg	+	+
Thiomonas islandica	Proteobacteria	Unlikely	neg
Thomasclavelia saccharogumia	Firmicutes	Rare	+	neg	neg
Thomasclavelia spiroformis	Firmicutes	Moderate	+			neg
Tidjanibacter inops	Bacteroidetes	Moderate
Tidjanibacter massiliensis	Bacteroidetes	Rare	neg	neg	neg
Timonella senegalensis	Actinobacteria	Rare	+	+	neg	+	+
Tissierella praeacuta	Firmicutes	Rare	+
Trabulsiella guamensis	Proteobacteria	Rare	neg	+	neg	neg	w			neg								+	+
Tractidigestivibacter scatoligenes	Actinobacteria	Rare	+	neg		neg	neg						+
Traorella massiliensis	Firmicutes	Rare	neg	neg	neg	neg
Treponema berlinense	Spirochaetes	Rare	neg	neg	neg	neg	neg						neg
Treponema brennaborense	Spirochaetes	Unlikely	neg	neg
Treponema denticola	Spirochaetes	Rare	neg
Treponema medium	Spirochaetes	Unlikely	neg
Treponema parvum	Spirochaetes	Unlikely	neg
Treponema pectinovorum	Spirochaetes	Rare	neg	neg
Treponema pedis	Spirochaetes	Unlikely	neg
Treponema peruense	Spirochaetes	Rare	neg	neg
Treponema phagedenis	Spirochaetes	Unlikely	neg	neg		neg
Treponema primitia	Spirochaetes	Unlikely	neg	neg
Treponema ruminis	Spirochaetes	Unlikely	neg
Treponema socranskii	Spirochaetes	Unlikely	neg	neg
Treponema succinifaciens	Spirochaetes	Rare	neg	neg	neg
Treponema vincentii	Spirochaetes	Rare	neg
Tropheryma whipplei	Actinobacteria	Unlikely	neg
Trueperella bernardiae	Actinobacteria	Rare	+	neg		neg	neg						neg
Trueperella pyogenes	Actinobacteria	Rare	+	neg		neg	neg
Tsukamurella pulmonis	Actinobacteria	Unlikely	+	+		+
Tumebacillus avium	Firmicutes	Unlikely	+	neg	+					neg
Tumebacillus permanentifrigoris	Firmicutes	Unlikely	+	neg	neg
Turicibacter sanguinis	Firmicutes	Moderate	+	neg	neg	neg	neg						neg
Turicimonas muris	Proteobacteria	Rare	neg	neg		neg	neg						neg
Tyzzerella nexilis	Firmicutes	Widespread	+
Ureaplasma parvum	Tenericutes	Rare	unk
Ureaplasma urealyticum	Tenericutes	Rare	unk
Ureibacillus massiliensis	Firmicutes	Rare	neg	+	+	+	+											+	+
Ureibacillus suwonensis	Firmicutes	Unlikely	neg	+	+		+
Ureibacillus thermosphaericus	Firmicutes	Non	neg			neg						neg							neg
Urinicoccus timonensis	Firmicutes	Rare	+	neg	neg
Urmitella timonensis	Firmicutes	Rare	+
Uruburuella suis	Proteobacteria	Rare	neg	+	+	d	neg												neg
Vaginimicrobium propionicum	Actinobacteria	Unlikely	+	neg	neg	+
Vagococcus carniphilus	Firmicutes	Rare	+			neg	neg
Vagococcus fluvialis	Firmicutes	Rare	+	neg			d
Vagococcus lutrae	Firmicutes	Rare	+	neg		neg	neg
Vagococcus penaei	Firmicutes	Rare	+			neg	+
Vagococcus teuberi	Firmicutes	Rare	+			neg	neg
Vampirovibrio chlorellavorus	Cyanobacteria	Unlikely	neg
Varibaculum cambriense	Actinobacteria	Rare	+	neg		neg	neg						neg
Varibaculum timonense	Actinobacteria	Rare	+	neg	neg	+
Variovorax boronicumulans	Proteobacteria	Rare	neg	+	+	neg	neg												neg
Variovorax ginsengisoli	Proteobacteria	Unlikely	neg	+	+	neg	neg
Variovorax paradoxus	Proteobacteria	Unlikely	neg	+	+	+
Veillonella atypica	Firmicutes	Widespread	neg		neg	neg	vr						neg
Veillonella denticariosi	Firmicutes	Rare	neg	neg			+
Veillonella dispar	Firmicutes	Moderate	neg		neg	neg	neg						neg
Veillonella infantium	Firmicutes	Rare	neg	neg		neg	neg						neg
Veillonella magna	Firmicutes	Rare	neg	neg	neg		+
Veillonella montpellierensis	Firmicutes	Rare	neg	vr	neg	neg
Veillonella nakazawae	Firmicutes	Rare	neg	+			+						neg	+
Veillonella parvula	Firmicutes	Widespread	neg	neg	neg	neg	vr						neg
Veillonella ratti	Firmicutes	Rare	neg		neg	neg	vr						neg
Veillonella rodentium	Firmicutes	Unlikely	neg
Veillonella rogosae	Firmicutes	Minor	neg	neg	neg	neg	d						neg
Veillonella tobetsuensis	Firmicutes	Minor	neg	neg		neg	neg						neg
Vescimonas coprocola	Firmicutes	Rare	neg
Vescimonas fastidiosa	Firmicutes	Rare	neg
Vibrio alginolyticus	Proteobacteria	Rare	neg	+	+	neg	neg											+	d(+)
Vibrio cholerae	Proteobacteria	Unlikely	neg		+	neg	neg			+								+	+
Vibrio cincinnatiensis	Proteobacteria	Rare	neg	+	+	neg	neg			+								+	neg
Vibrio fluvialis	Proteobacteria	Rare	neg		+	neg	+			+								neg	neg
Vibrio furnissii	Proteobacteria	Rare	neg		+	neg	+			+								neg	neg
Vibrio metoecus	Proteobacteria	Rare	neg		+	neg	neg											+	+
Vibrio metschnikovii	Proteobacteria	Rare	neg		neg	neg	+			d								d	neg
Vibrio mimicus	Proteobacteria	Rare	neg		+	neg	neg			d								+	+
Vibrio natriegens	Proteobacteria	Rare	neg		+		neg											neg	neg
Vibrio neptunius	Proteobacteria	Unlikely	neg	+	+	neg	d											neg	neg
Vibrio parahaemolyticus	Proteobacteria	Rare	neg	+	+	neg	neg											+	+
Vibrio proteolyticus	Proteobacteria	Rare	neg		+		+											+	neg
Vibrio rumoiensis	Proteobacteria	Unlikely	neg	+	+		neg
Vibrio vulnificus	Proteobacteria	Rare	neg		+		neg											+	d
Victivallis vadensis	Lentisphaerae	Minor	neg
Virgibacillus dakarensis	Firmicutes	Rare	+	+	+
Virgibacillus dokdonensis	Firmicutes	Rare	vr	+	+	neg	neg											neg	neg
Virgibacillus doumboii	Firmicutes	Rare	+	+	neg	+	+
Virgibacillus halodenitrificans	Firmicutes	Rare	vr	+	+	neg	neg											neg	neg
Virgibacillus ihumii	Firmicutes	Rare	+	+	neg	neg
Virgibacillus massiliensis	Firmicutes	Rare	+	+	+	neg
Virgibacillus ndiopensis	Firmicutes	Rare	+	+	+
Virgibacillus pantothenticus	Firmicutes	Rare	+	+		neg
Virgibacillus profundi	Firmicutes	Unlikely	vr	+	+		neg											neg	neg
Virgibacillus proomii	Firmicutes	Rare	+	+			d
Virgibacillus salexigens	Firmicutes	Unlikely	+	+	+		neg											neg	neg
Virgibacillus senegalensis	Firmicutes	Non	+	+	neg	neg
Virgibacillus siamensis	Firmicutes	Unlikely	+	+	+		neg
Vitreoscilla massiliensis	Proteobacteria	Rare	neg	neg	neg
Vitreoscilla stercoraria	Proteobacteria	Rare	neg	+	CO-binding o type
Weeksella virosa	Firmicutes	Rare	neg	+	+	neg	neg			neg		neg						neg	neg
Weissella cibaria	Firmicutes	Minor	+	neg		neg							neg
Weissella confusa	Firmicutes	Minor	+	+		neg	+						neg
Weissella paramesenteroides	Firmicutes	Minor	+	vr	neg
Weissella viridescens	Firmicutes	Minor	+	neg	neg
Weizmannia coagulans	Firmicutes	Rare	+	+		neg	d											neg	neg
Winkia neuii	Actinobacteria	Rare	+	+		neg
Wolinella succinogenes	Proteobacteria	Rare	neg	neg	neg	neg												neg	neg
Xanthomonas massiliensis	Proteobacteria	Unlikely	neg	+	neg
Xylanimonas cellulosilytica	Actinobacteria	Rare	+	w	+	neg	neg											neg	neg
Yangia pacifica	Proteobacteria	Non	neg	+	w	+
Yersinia aldovae	Proteobacteria	Rare	neg	+	neg	+	neg			neg								neg	+
Yersinia aleksiciae	Proteobacteria	Rare	neg	+	neg	+	neg											+	+
Yersinia alsatica	Proteobacteria	Rare	neg	+	neg	+	neg											neg	d
Yersinia artesiana	Proteobacteria	Rare	neg	+	neg	+	neg											neg	d(neg)
Yersinia bercovieri	Proteobacteria	Rare	neg		neg	+	neg			neg								neg	+
Yersinia enterocolitica subsp. enterocolitica	Proteobacteria	Unlikely	neg	+	neg	+	neg			d								neg	+
Yersinia frederiksenii	Proteobacteria	Rare	neg	+	neg	+	neg			neg								neg	+
Yersinia intermedia	Proteobacteria	Rare	neg	+	neg	+	neg			neg								neg	+
Yersinia kristensenii subsp. kristensenii	Proteobacteria	Rare	neg	+	neg	+	neg			neg								neg	+
Yersinia kristensenii subsp. rochesterensis	Proteobacteria	Rare	neg	+	neg	+	neg											neg	+
Yersinia massiliensis	Proteobacteria	Rare	neg	+	neg	+	d(neg)											d(neg)	+
Yersinia mollaretii	Proteobacteria	Rare	neg		neg		neg			neg								neg	+
Yersinia occitanica	Proteobacteria	Rare	neg	+	neg	+													+
Yersinia pestis	Proteobacteria	Non	neg	+	neg	neg	neg			neg								neg	neg
Yersinia proxima	Proteobacteria	Rare	neg	+	neg	+	neg											neg	d(neg)
Yersinia pseudotuberculosis	Proteobacteria	Unlikely	neg	+	neg	+	neg					+						neg	neg
Yersinia rohdei	Proteobacteria	Rare	neg		neg	d	neg											neg	w
Yersinia vastinensis	Proteobacteria	Rare	neg	+	neg	+	neg											neg	d(+)
Yokenella regensburgei	Proteobacteria	Rare	neg	+	neg	neg	vr			neg								+	+
Yonghaparkia alkaliphila	Actinobacteria	Non	+		+	neg
Zunongwangia profunda	Bacteroidetes	Non	neg				neg											neg	neg

Click on table headings to sort. Table abbreviations: ArDH - arginine dihydrolase; CbAh - carbonic anhydrase; Cata - catalase test; Coag - coagulase test; DNA - DNase; Fibr - fibrinolysin; γ-GT - γ-glutamyl transferase; GluD - Glu decarboxylase; G6P+ - G6PDH and 6PGDH; HSNu - heat stable nuclease; Haem - haemagglutinin; Hyal - hyaluridonase; LysD - Lys decarboxylase; OrnD - Orn decarboxylase; Oxid - oxidase test; Urea - urease;

BACTERIA TABLES

INFORMATION