Pu•biome

FILTERS

Coloniser

Gram Stain

Oxygen tolerance

Total 2651

Current 2651

Bacteria	Phylum	Coloniser	Gram	Form	Acet	Prop	But	IBA	Val	IVA	Citr	Lact	Mala	Pyru	Succ	Actn	BuOH	EtOH	Indl	Pigm	NH3	CO2	H2	H2S
Abiotrophia defectiva	Firmicutes	Minor	+				+					Major(+)				neg			neg
Absiella argi	Firmicutes	Rare	+	minor(+)	minor(+)		minor(+)					Major(+)				neg			neg					+
Absiella innocuum	Firmicutes	Moderate
Absiella tortuosum	Firmicutes	Rare	+	trace(+)	+	neg	+					+			+	neg			neg				+	vr
Acetanaerobacterium elongatum	Firmicutes	Rare	+	+	+	+	+					+			+	neg		+						neg
Acetatifactor muris	Firmicutes	Rare	+		+		+
Acetitomaculum ruminis	Firmicutes	Rare	+		Major(+)	+	+	minor(+)	trace(+)	minor(+)
Acetivibrio cellulolyticus	Firmicutes	Rare	neg		+							trace(+)			neg	neg		+	neg	yellow	neg	+	+	neg
Acetivibrio clariflavus	Firmicutes	Unlikely	vr	+	+							minor(+)			minor(+)			minor	d(neg)	bright yellow			+
Acetivibrio ethanolgignens	Firmicutes	Minor	neg	minor(+)	+	neg						neg			neg			Major	+		+	+	+	+
Acetivibrio saccincola	Firmicutes	Unlikely	+		+													+	neg	dark yellow			+
Acetivibrio thermocellus	Firmicutes	Unlikely	neg		+							+						+		yellow		+	+
Acetoanaerobium sticklandii	Firmicutes	Rare	+		+	minor(+)	+	minor(+)		+						neg			neg		+			+
Acetobacter pasteurianus	Proteobacteria	Unlikely	neg																neg					neg
Acetobacterium woodii	Firmicutes	Rare	+		+										trace(+)
Acetomicrobium hydrogeniformans	Synergistetes	Unlikely	neg		+		+																Major(+)	+
Achromobacter denitrificans	Proteobacteria	Unlikely	neg													+			neg	neg	trace			neg
Achromobacter insuavis	Proteobacteria	Unlikely	neg
Achromobacter spanius	Proteobacteria	Unlikely	neg																neg					neg
Achromobacter xylosoxidans	Proteobacteria	Rare	neg													+			neg		trace			neg
Acidaminococcus fermentans	Firmicutes	Widespread	neg																neg		+			neg
Acidaminococcus intestini	Firmicutes	Moderate	neg		+	+	+					minor(+)							(d)	neg
Acidaminococcus massiliensis	Firmicutes	Rare	neg																	neg
Acidaminococcus provencensis	Firmicutes	Rare	neg
Acidaminococcus timonensis	Firmicutes	Rare	neg																	neg
Acidipropionibacterium acidipropionici	Actinobacteria	Rare	+
Acidipropionibacterium jensenii	Actinobacteria	Rare	+
Acidisarcina polymorpha	Acidobacteria	Rare	neg
Acidovorax facilis	Proteobacteria	Rare	neg																neg					neg
Acidovorax sp. strain KKS102	Proteobacteria	Rare	neg
Acidovorax temperans	Proteobacteria	Rare	neg																neg	neg				neg
Acidovorax wautersii	Proteobacteria	Rare	neg																neg
Acinetobacter baumannii	Proteobacteria	Unlikely	neg													neg			neg	neg				neg
Acinetobacter bereziniae	Proteobacteria	Unlikely	neg																neg					neg
Acinetobacter calcoaceticus	Proteobacteria	Rare	neg													+			neg					neg
Acinetobacter guillouiae	Proteobacteria	Rare	neg																neg					neg
Acinetobacter haemolyticus	Proteobacteria	Unlikely	neg																neg					neg
Acinetobacter idrijaensis	Proteobacteria	Rare
Acinetobacter johnsonii	Proteobacteria	Rare	neg																neg					neg
Acinetobacter junii	Proteobacteria	Rare	neg																neg					neg
Acinetobacter lwoffii	Proteobacteria	Unlikely	neg													neg			neg					neg
Acinetobacter parvus	Proteobacteria	Unlikely	neg
Acinetobacter pittii	Proteobacteria	Unlikely	neg																neg					neg
Acinetobacter radioresistens	Proteobacteria	Rare	neg																neg					neg
Acinetobacter schindleri	Proteobacteria	Unlikely	neg
Acinetobacter septicus	Proteobacteria	Unlikely	neg																neg					neg
Acinetobacter towneri	Proteobacteria	Unlikely	neg
Acinetobacter ursingii	Proteobacteria	Unlikely	neg
Acinetobacter variabilis	Proteobacteria	Unlikely	neg
Actinobacillus capsulatus	Proteobacteria	Rare	neg													neg			neg	neg				neg
Actinobacillus minor	Proteobacteria	Unlikely	neg																neg
Actinobacillus pleuropneumoniae	Proteobacteria	Rare	neg													neg			neg					+
Actinobacillus succinogenes	Proteobacteria	Rare	neg												Major(+)				neg					neg
Actinobacillus ureae	Proteobacteria	Non	neg													neg			neg	neg
Actinobaculum massiliense	Actinobacteria	Minor	+													neg
Actinomyces bouchesdurhonensis	Actinobacteria	Unlikely	+
Actinomyces canis	Actinobacteria	Non	+		+							+			+	neg
Actinomyces dentalis	Actinobacteria	Non	+		+							+			+	neg			neg
Actinomyces georgiae	Actinobacteria	Non	+		+							+			+				neg
Actinomyces gerencseriae	Actinobacteria	Unlikely	+	+	+							+		neg	+								neg
Actinomyces graevenitzii	Actinobacteria	Minor	+		+							+			+	neg			neg	neg
Actinomyces ihuae	Actinobacteria	Rare	+
Actinomyces israelii	Actinobacteria	Non	+		+							+			+					neg
Actinomyces johnsonii	Actinobacteria	Rare	+		+							+			+
Actinomyces marseillensis	Actinobacteria	Rare	+		+							+			+
Actinomyces massiliensis	Actinobacteria	Rare	+																neg
Actinomyces mediterranea	Actinobacteria	Rare	+
Actinomyces minihominis	Actinobacteria	Rare	+
Actinomyces naeslundii	Actinobacteria	Minor	+	+	+							+			+	neg			neg
Actinomyces oris	Actinobacteria	Rare	+		+							+			+	neg			neg
Actinomyces pacaensis	Actinobacteria	Rare	+
Actinomyces polynesiensis	Actinobacteria	Rare	+
Actinomyces provencensis	Actinobacteria	Rare	+																	grey
Actinomyces sp. ph3	Actinobacteria	Rare	+		+							+			+
Actinomyces timonensis	Actinobacteria	Rare	+																neg
Actinomyces urogenitalis	Actinobacteria	Rare	+		+							+			+	+			neg
Actinomyces viscosus	Actinobacteria	Minor	+		+							+			+	neg			neg
Actinosynnema mirum	Actinobacteria	Non	+																	yellow-brown
Actinotignum schaalii	Actinobacteria	Rare	+		+										+	neg
Acutalibacter muris	Firmicutes	Rare	+
Acutalibacter timonensis	Firmicutes	Minor
Adhaeribacter aquaticus	Bacteroidetes	Unlikely	neg																neg	pink				neg
Adlercreutzia caecimuris	Actinobacteria	Rare	+
Adlercreutzia equolifaciens	Actinobacteria	Moderate	+
Adlercreutzia equolifaciens subsp. celatus	Actinobacteria	Rare	+		trace(+)							trace(+)			trace(+)
Adlercreutzia hattorii	Actinobacteria	Rare	+			+													neg	neg
Adlercreutzia mucosicola	Actinobacteria	Rare	+																neg
Adlercreutzia rubneri	Actinobacteria	Rare	+																neg
Aeribacillus pallidus	Firmicutes	Unlikely	+													neg
Aerococcus vaginalis	Firmicutes	Non	+									+				neg				neg
Aerococcus viridans	Firmicutes	Rare	+													neg			neg
Aeromicrobium massiliense	Actinobacteria	Rare	+																neg
Aeromicrobium tamlense	Actinobacteria	Rare	+													w			neg					neg
Aeromonas allosaccharophila	Proteobacteria	Rare	neg													neg			+					neg
Aeromonas bestiarum	Proteobacteria	Rare	neg													+			+					+
Aeromonas caviae	Proteobacteria	Unlikely	neg													neg			+					neg
Aeromonas dhakensis	Proteobacteria	Rare	neg													+			+					+
Aeromonas encheleia	Proteobacteria	Unlikely	neg													d(neg)			+					neg
Aeromonas enteropelogenes	Proteobacteria	Rare	neg													neg			+					neg
Aeromonas eucrenophila	Proteobacteria	Non	neg													neg								+
Aeromonas hydrophila	Proteobacteria	Unlikely	neg													+			+					+
Aeromonas hydrophila subsp. hydrophila	Proteobacteria	Unlikely	neg													+			+					neg
Aeromonas jandaei	Proteobacteria	Rare	neg													+			+	neg				+
Aeromonas media	Proteobacteria	Rare	neg													neg			vr	+				neg
Aeromonas popoffii	Proteobacteria	Unlikely	neg													+			+					vr
Aeromonas salmonicida	Proteobacteria	Unlikely	neg													d			+	brown				neg
Aeromonas schubertii	Proteobacteria	Non	neg													vr			neg					neg
Aeromonas sobria	Proteobacteria	Rare	neg													d			+					+
Aeromonas taiwanensis	Proteobacteria	Non	neg													neg			+					neg
Aeromonas tecta	Proteobacteria	Rare	neg													neg			neg
Aeromonas trota	Proteobacteria	Rare	neg													neg			+					+
Aeromonas veronii	Proteobacteria	Rare	neg													vr			+					neg
Aestuariimicrobium kwangyangense	Actinobacteria	Rare	+
Afipia birgiae	Proteobacteria	Unlikely	neg																neg					neg
Afipia broomeae	Proteobacteria	Rare	neg																neg					neg
Afipia lausannensis	Proteobacteria	Unlikely	neg																neg					neg
Africanella massiliensis	Firmicutes	Rare	+
Agathobacter ruminis	Firmicutes	Rare	+		+		+					+											+
Agathobaculum butyriciproducens	Firmicutes	Moderate	+		+		+										+	+
Agathobaculum desmolans	Firmicutes	Minor	+		+		+					trace(+)			trace(+)				+				neg	neg
Aggregatibacter actinomycetemcomitans	Proteobacteria	Rare	neg																neg
Aggregatibacter aphrophilus	Proteobacteria	Minor	neg													vr			neg					neg
Aggregatibacter segnis	Proteobacteria	Minor	neg																neg					neg
Agrilactobacillus composti	Firmicutes	Unlikely	+									+
Agrobacterium radiobacter	Proteobacteria	Unlikely	neg																	neg
Agrobacterium rhizogenes	Proteobacteria	Unlikely	neg																neg	neg
Agrobacterium tumefaciens	Proteobacteria	Unlikely	neg																neg
Agrococcus casei	Actinobacteria	Rare	+
Agrococcus jejuensis	Actinobacteria	Rare	+																neg	yellow
Agrococcus jenensis	Actinobacteria	Rare	+													neg			neg					+
Agrococcus terreus	Actinobacteria	Unlikely	+													neg			neg	yellow
Akkermansia glycaniphila	Verrucomicrobia	Rare	neg																neg
Akkermansia muciniphila	Verrucomicrobia	Widespread	neg		+	+												+	neg					neg
Alcaligenes faecalis	Proteobacteria	Rare	neg													+			neg					neg
Alcaligenes faecalis subsp. faecalis	Proteobacteria	Unlikely	neg													+			neg	neg				neg
Aliagarivorans marinus	Proteobacteria	Rare	neg																neg
Aliarcobacter butzleri	Proteobacteria	Rare	neg																neg	variable				neg
Aliarcobacter cryaerophilus	Proteobacteria	Rare	neg													neg			neg					neg
Aliarcobacter skirrowii	Proteobacteria	Rare	neg													neg			neg					neg
Alicyclobacillus acidocaldarius	Firmicutes	Rare	+																	neg
Aliiruegeria sabulilitoris	Proteobacteria	Unlikely	neg
Alistipes communis	Bacteroidetes	Rare	neg		+	+									+				neg	variable
Alistipes dispar	Bacteroidetes	Rare	neg		+	+									+				w	neg
Alistipes finegoldii	Bacteroidetes	Moderate	neg		minor(+)	minor(+)									+				+	+
Alistipes ihumii	Bacteroidetes	Moderate	neg																neg
Alistipes indistinctus	Bacteroidetes	Moderate	neg		+										+				neg
Alistipes inops	Bacteroidetes	Rare	neg		+	minor(+)									+				+	w
Alistipes marseilloanorexicus	Bacteroidetes	Rare	neg
Alistipes massiliensis	Bacteroidetes	Rare	neg
Alistipes megaguti	Bacteroidetes	Rare	neg
Alistipes montrealensis	Bacteroidetes	Rare	neg															+	+			+	+
Alistipes obesi	Bacteroidetes	Moderate	neg																neg
Alistipes onderdonkii	Bacteroidetes	Moderate	neg												+				+	+
Alistipes onderdonkii subsp. vulgaris	Bacteroidetes	Rare	neg		+	+									+				vr	neg
Alistipes provencensis	Bacteroidetes	Rare	neg
Alistipes putredinis	Bacteroidetes	Widespread	neg												+				+	neg				vr
Alistipes senegalensis	Bacteroidetes	Moderate	neg																neg
Alistipes shahii	Bacteroidetes	Widespread	neg												+				+	+
Alistipes timonensis	Bacteroidetes	Moderate	neg																w	brown
Alkalibacillus halophilus	Firmicutes	Unlikely	+																neg					neg
Alkalihalobacillus alcalophilus	Firmicutes	Unlikely	+																	neg
Alkalihalobacillus gibsonii	Firmicutes	Rare	+
Alkalihalobacillus halodurans	Firmicutes	Rare	+													+			neg					neg
Alkalihalobacillus oshimensis	Firmicutes	Unlikely	+
Alkaliphilus metalliredigens	Firmicutes	Rare	+
Alkaliphilus oremlandii	Firmicutes	Non	+
Alkaliphilus transvaalensis	Firmicutes	Non	+
Alkanindiges illinoisensis	Proteobacteria	Non	vr
Allisonella histaminiformans	Firmicutes	Minor	neg																neg
Allobaculum fili	Firmicutes	Rare	+																+
Allobaculum mucilyticum	Firmicutes	Rare	+																+
Alloprevotella rava	Bacteroidetes	Rare	neg		+					trace(+)					Major(+)				neg					neg
Alloprevotella tannerae	Bacteroidetes	Minor	neg	+	+			+		+					+				neg	variable				+
Alloscardovia omnicolens	Actinobacteria	Minor	+																neg
Alteracholeplasma palmae	Tenericutes	Rare	unk
Alterileibacterium massiliense	Firmicutes	Rare	neg
Amaricoccus kaplicensis	Proteobacteria	Unlikely	neg													neg			neg					neg
Amedibacillus dolichus	Firmicutes	Minor	+	minor(+)	minor(+)		minor(+)					+							neg	neg				+
Amedibacterium intestinale	Firmicutes	Rare	+				+					Major(+)							neg	neg				+
Aminipila butyrica	Firmicutes	Rare	+		+		+												neg				trace(+)	+
Aminipila terrae	Firmicutes	Rare	+
Aminomonas paucivorans	Synergistetes	Rare	neg		+	+
Ammonifex degensii	Firmicutes	Non	neg		+																+	+	+	+
Amycolatopsis alba	Actinobacteria	Rare	+																					+
Amycolatopsis mediterranei	Actinobacteria	Rare	+
Amycolatopsis thailandensis	Actinobacteria	Rare	+																	neg
Amycolatopsis vancoresmycina	Actinobacteria	Unlikely	+																neg					neg
Anaerobiospirillum succiniciproducens	Proteobacteria	Rare	neg		+							minor(+)			+				neg
Anaerobiospirillum thomasii	Proteobacteria	Rare	neg		+										+
Anaerobutyricum hallii	Firmicutes	Widespread	+	minor(+)	+		+					minor(+)			minor(+)		+		neg				neg	neg
Anaerobutyricum soehngenii	Firmicutes	Rare	+		+		+					+							neg
Anaerococcus hydrogenalis	Firmicutes	Rare	+		+	+	Major(+)					+				neg			+				Major(+)
Anaerococcus jeddahensis	Firmicutes	Rare	+
Anaerococcus lactolyticus	Firmicutes	Rare	+			minor(+)	Major(+)					+			minor(+)				neg
Anaerococcus marasmi	Firmicutes	Rare	+
Anaerococcus mediterraneensis	Firmicutes	Rare	+
Anaerococcus murdochii	Firmicutes	Rare	+		+		+												neg
Anaerococcus obesiensis	Firmicutes	Rare	+
Anaerococcus octavius	Firmicutes	Rare	+		+		Major(+)		+			+				neg			neg
Anaerococcus prevotii	Firmicutes	Minor	+		+	+	Major(+)					+							neg
Anaerococcus provencensis	Firmicutes	Rare	+
Anaerococcus rubeinfantis	Firmicutes	Rare	+																+
Anaerococcus senegalensis	Firmicutes	Rare	+																+
Anaerococcus tetradius	Firmicutes	Rare	+				+												neg
Anaerococcus vaginalis	Firmicutes	Minor	+		+		Major(+)					+							neg
Anaerocolumna aminovalerica	Firmicutes	Rare	+		Major(+)	neg			neg									+	neg				+
Anaerocolumna cellulosilytica	Firmicutes	Rare	+		+													Major	neg				+	w(+)
Anaerocolumna chitinilytica	Firmicutes	Rare	+		+													+				+	+
Anaerocolumna sedimenticola	Firmicutes	Rare	+																neg
Anaerocolumna xylanovorans	Firmicutes	Rare	+	+	+		+											+				+	+
Anaerofilum pentosovorans	Firmicutes	Rare	+	+	+	neg	neg					+						+					neg	neg
Anaerofustis stercorihominis	Firmicutes	Minor	+		+		+												neg	fluorescent
Anaeroglobus geminatus	Firmicutes	Minor	neg		+	+	+	+		Major(+)									neg	neg
Anaeromassilibacillus senegalensis	Firmicutes	Rare	neg
Anaerorhabdus furcosa	Firmicutes	Rare	neg	trace(+)	Major(+)							Major(+)			trace(+)				neg					neg
Anaerosalibacter bizertensis	Firmicutes	Rare	+		+	+	+	+		+													neg	neg
Anaerosalibacter massiliensis	Firmicutes	Rare	+																neg
Anaerosphaera massiliensis	Firmicutes	Rare	+																neg
Anaerospora hongkongensis	Firmicutes	Rare	neg
Anaerostipes butyraticus	Firmicutes	Rare	+		+	minor(+)	Major(+)												neg			Major(+)	Major(+)
Anaerostipes caccae	Firmicutes	Moderate	+		+		+					+							neg			+	+
Anaerostipes coli	Firmicutes	Rare	+
Anaerostipes hadrus	Firmicutes	Moderate	+	+	minor(+)		+					minor(+)		trace(+)	trace(+)				w		neg		+
Anaerostipes hominis	Firmicutes	Rare	vr			+	+
Anaerostipes rhamnosivorans	Firmicutes	Rare	vr	+	+		+					+							neg				+
Anaerostipes rhamnosus	Firmicutes	Rare	+
Anaerotignum faecicola	Firmicutes	Rare	+		+	+	minor(+)	+
Anaerotignum lactatifermentans	Firmicutes	Moderate	neg		+	+	trace(+)		trace(+)	+									neg
Anaerotignum neopropionicum	Firmicutes	Rare	neg		+	+	+	+		+													+
Anaerotignum propionicum	Firmicutes	Rare	+		minor(+)	+	+	+		+		minor(+)			minor(+)				neg		+		Major(+)	+
Anaerotruncus colihominis	Firmicutes	Moderate	+		+		+												+				+
Anaerotruncus massiliensis	Firmicutes	Rare	neg		Major(+)		+	+		+									neg
Anaerotruncus rubiinfantis	Firmicutes	Moderate	+
Anaerovorax odorimutans	Firmicutes	Rare	vr		+		+														+		+
Ancylobacter polymorphus	Proteobacteria	Rare	neg													neg			neg					neg
Aneurinibacillus aneurinilyticus	Firmicutes	Rare	+													neg			neg	pale yellow				neg
Aneurinibacillus migulanus	Firmicutes	Rare	+																neg
Angelakisella massiliensis	Firmicutes	Rare	neg																	yellow
Anoxybacillus flavithermus	Firmicutes	Non	+													+			+	dark yellow				neg
Anoxybacillus gonensis	Firmicutes	Unlikely	+																neg					neg
Anoxynatronum sibiricum	Firmicutes	Rare	+		Major(+)													+
Anseongella ginsenosidimutans	Bacteroidetes	Unlikely	neg																neg
Aquabacterium citratiphilum	Proteobacteria	Rare	neg																					neg
Aquabacterium commune	Proteobacteria	Rare	neg																					neg
Aquabacterium parvum	Proteobacteria	Rare	neg																					neg
Aquamicrobium lusatiense	Proteobacteria	Unlikely	neg																neg
Aquincola tertiaricarbonis	Proteobacteria	Non	neg																neg
Arabia massiliensis	Actinobacteria	Rare	neg
Arachnia propionica	Actinobacteria	Rare	+
Arcanobacterium haemolyticum	Actinobacteria	Rare	+													neg			neg
Arthrobacter agilis	Actinobacteria	Non	+													neg			neg	rose-red				neg
Arthrobacter castelli	Actinobacteria	Rare	+																	light yellow
Arthrobacter citreus	Actinobacteria	Unlikely	vr																neg	lemon yellow
Arthrobacter gandavensis	Actinobacteria	Unlikely	+																	yellow
Arthrobacter globiformis	Actinobacteria	Unlikely	+		+							+						+
Arthrobacter koreensis	Actinobacteria	Unlikely	+													+			+	yellow
Arthrobacter luteolus	Actinobacteria	Unlikely	+																	light yellow
Arthrobacter parietis	Actinobacteria	Non	+																	yellow-orange
Arthrobacter pigmenti	Actinobacteria	Non	+																	light yellow
Arthrobacter russicus	Actinobacteria	Unlikely	+
Asaccharospora irregularis	Firmicutes	Rare	+	minor(+)	+	minor(+)		minor(+)		+									neg				neg	+
Asticcacaulis biprosthecium	Proteobacteria	Unlikely	neg
Asticcacaulis excentricus	Proteobacteria	Unlikely	neg
Atlantibacter hermannii	Proteobacteria	Rare	neg													neg			+	yellow				neg
Atopobium minutum	Actinobacteria	Minor	+	+	+							Major(+)			trace(+)				neg		+		neg
Atopostipes suicloacalis	Firmicutes	Unlikely	+	+	+							+							neg
Aureimonas altamirensis	Proteobacteria	Unlikely	neg													neg			neg	yellow
Aureimonas ureilytica	Proteobacteria	Unlikely	neg																neg	yellow
Averyella dalhousiensis	Proteobacteria	Rare	neg													neg			neg	neg				neg
Azoarcus pumilus	Proteobacteria	Rare	neg													neg			neg
Azospirillum lipoferum	Proteobacteria	Rare	neg																neg	neg
Azotobacter vinelandii	Proteobacteria	Non	neg
Bacilliculturomica massiliensis	Firmicutes	Rare	+
Bacillus altitudinis	Firmicutes	Rare	+													neg			neg	white
Bacillus amyloliquefaciens	Firmicutes	Rare	+													+			neg					neg
Bacillus andreraoultii	Firmicutes	Rare	+																neg
Bacillus aneurinolyticus	Firmicutes	Rare	+													neg			neg					neg
Bacillus anthracis	Firmicutes	Non	+													+				neg
Bacillus atrophaeus	Firmicutes	Rare	+													+			neg	+				neg
Bacillus badius DSM 23T	Firmicutes	Rare	+													neg			neg
Bacillus badius DSM 5610	Firmicutes	Rare	+													neg			neg
Bacillus baekryungensis	Firmicutes	Non	+
Bacillus benzoevorans	Firmicutes	Rare	+													neg
Bacillus caccae	Firmicutes	Rare	+
Bacillus cereus	Firmicutes	Minor	+													vr			neg					neg
Bacillus circulans	Firmicutes	Rare	+													neg			neg					neg
Bacillus clausii	Firmicutes	Rare	+													neg			neg	neg				neg
Bacillus cytotoxicus	Firmicutes	Rare	+													w			neg					neg
Bacillus dakarensis	Firmicutes	Rare	+
Bacillus endophyticus	Firmicutes	Unlikely	+													neg			neg	+
Bacillus firmus	Firmicutes	Rare	+													neg			neg	+				neg
Bacillus fordii	Firmicutes	Rare	neg													neg				+
Bacillus halotolerans	Firmicutes	Rare	+													+			neg	cream				+
Bacillus idriensis	Firmicutes	Rare	+													vr			neg					neg
Bacillus infantis	Firmicutes	Rare	+
Bacillus kwashiorkori	Firmicutes	Rare	+
Bacillus licheniformis	Firmicutes	Minor	+													+			neg	neg				neg
Bacillus marasmi	Firmicutes	Rare	+
Bacillus massilioanorexius	Firmicutes	Rare	+													+			neg	+
Bacillus massiliogabonensis	Firmicutes	Unlikely	neg
Bacillus massilionigeriensis	Firmicutes	Rare	+
Bacillus mediterraneensis	Firmicutes	Rare	+
Bacillus methanolicus	Firmicutes	Non	+
Bacillus mojavensis	Firmicutes	Rare	+													+			neg					neg
Bacillus mycoides	Firmicutes	Rare	+													+			neg					neg
Bacillus niameyensis	Firmicutes	Rare	+																neg
Bacillus pakistanensis	Firmicutes	Rare	+													neg			neg					neg
Bacillus phocaeensis	Firmicutes	Rare	+																neg
Bacillus pseudofirmus	Firmicutes	Rare	+																	+
Bacillus pseudomycoides	Firmicutes	Unlikely	+													+			neg					neg
Bacillus pumilus	Firmicutes	Rare	+													+			neg					neg
Bacillus rubiinfantis	Firmicutes	Rare	+																neg
Bacillus sinesaloumensis	Firmicutes	Unlikely	+
Bacillus siralis	Firmicutes	Rare	+													neg			neg	brown				neg
Bacillus smithii	Firmicutes	Rare	+													d(neg)			neg					neg
Bacillus sonorensis	Firmicutes	Rare	+													+				brown or yellow
Bacillus subtilis	Firmicutes	Minor	+													+			neg					neg
Bacillus testis	Firmicutes	Rare	+
Bacillus thuringiensis	Firmicutes	Rare	+		Major(+)											+			neg					neg
Bacillus timonensis	Firmicutes	Rare	neg																+
Bacillus tuaregi	Firmicutes	Rare	+																neg
Bacillus vallismortis	Firmicutes	Rare	+													+			neg					neg
Bacillus velezensis Variant polyfermenticus	Firmicutes	Rare	+													+			neg	creamy white				+
Bacillus wiedmannii	Firmicutes	Rare	+													+			neg					neg
Bacteroides acidifaciens	Bacteroidetes	Moderate	neg		+										+				(d)		+			neg
Bacteroides bouchesdurhonensis	Bacteroidetes	Moderate	neg																neg
Bacteroides caccae	Bacteroidetes	Widespread	neg		Major(+)	trace(+)				trace(+)					Major(+)				neg				trace(+)	neg
Bacteroides caecimuris	Bacteroidetes	Rare	neg																neg
Bacteroides cellulosilyticus	Bacteroidetes	Moderate	neg		+	+									+				+	brown
Bacteroides clarus	Bacteroidetes	Moderate	neg		Major(+)							Major(+)			Major(+)				+
Bacteroides congonensis	Bacteroidetes	Moderate	neg																neg
Bacteroides coprosuis	Bacteroidetes	Rare	neg		+	+									+				neg
Bacteroides cutis	Bacteroidetes	Moderate	neg
Bacteroides eggerthii	Bacteroidetes	Widespread	neg		+	minor(+)		trace(+)		trace(+)		trace(+)			Major(+)	neg			+				trace(+)	vr
Bacteroides faecalis	Bacteroidetes	Rare	neg	+	+							+							neg
Bacteroides faecichinchillae	Bacteroidetes	Rare	neg																neg
Bacteroides faecis	Bacteroidetes	Moderate	neg																+
Bacteroides finegoldii	Bacteroidetes	Widespread	neg																neg
Bacteroides fluxus	Bacteroidetes	Moderate	neg		+										+				+
Bacteroides fragilis	Bacteroidetes	Widespread	neg			+	+									neg			neg
Bacteroides galacturonicus	Bacteroidetes	Rare	neg	+	+							minor(+)							neg
Bacteroides gallinarum	Bacteroidetes	Moderate	neg		minor(+)	+				minor(+)					+				+
Bacteroides graminisolvens	Bacteroidetes	Rare	neg		+	+									Major(+)				neg					neg
Bacteroides helcogenes	Bacteroidetes	Rare	neg																neg
Bacteroides heparinolyticus	Bacteroidetes	Rare	neg		minor(+)	minor(+)				minor(+)					+				+					neg
Bacteroides ihuae	Bacteroidetes	Rare	neg																neg
Bacteroides ilei	Bacteroidetes	Minor	neg																neg
Bacteroides intestinalis	Bacteroidetes	Widespread	neg																+
Bacteroides luhongzhouii	Bacteroidetes	Rare	neg
Bacteroides luti	Bacteroidetes	Rare	neg	+	+	+									+				+
Bacteroides mediterraneensis	Bacteroidetes	Moderate	neg
Bacteroides ndongoniae	Bacteroidetes	Minor	neg
Bacteroides neonati	Bacteroidetes	Minor	neg																neg
Bacteroides nordii	Bacteroidetes	Moderate	neg	minor(+)	Major(+)	minor(+)				minor(+)									+
Bacteroides oleiciplenus	Bacteroidetes	Moderate	neg	+	+							+			+				+
Bacteroides ovatus	Bacteroidetes	Widespread	neg		+			neg		neg		neg							+	neg				w(+)
Bacteroides pectinophilus	Bacteroidetes	Moderate	neg	+	+							minor(+)						minor
Bacteroides propionicifaciens	Bacteroidetes	Rare	neg		+	+						minor(+)			minor(+)				neg					neg
Bacteroides pyogenes	Bacteroidetes	Minor	neg		+	trace(+)				trace(+)					+				neg	neg				vr
Bacteroides reticulotermitis	Bacteroidetes	Rare	neg		+	minor(+)									+				neg	neg
Bacteroides salyersiae	Bacteroidetes	Moderate	neg	minor(+)	Major(+)	minor(+)			minor(+)										+
Bacteroides sp. Strain D8	Bacteroidetes	Rare	neg		Major(+)	Major(+)		minor(+)		+									+
Bacteroides stercorirosoris	Bacteroidetes	Moderate	neg																+
Bacteroides stercoris	Bacteroidetes	Widespread	neg	+	Major(+)	+		trace(+)		trace(+)					Major(+)				+				neg
Bacteroides thetaiotaomicron	Bacteroidetes	Widespread	neg		+														+					+
Bacteroides timonensis	Bacteroidetes	Rare	neg																+
Bacteroides togonis	Bacteroidetes	Minor	neg
Bacteroides uniformis	Bacteroidetes	Widespread	neg																+					neg
Bacteroides xylanisolvens	Bacteroidetes	Widespread	neg		+	+									+	neg			neg
Bacteroides zhangwenhongi	Bacteroidetes	Rare	neg
Bacteroides zoogleoformans	Bacteroidetes	Rare	neg		+	+				+					Major(+)				neg		+		+	vr
Bariatricus massiliensis	Firmicutes	Minor	+
Barnesiella intestinihominis	Bacteroidetes	Moderate	neg		+										+				neg
Barnesiella viscericola	Bacteroidetes	Rare	neg		+										+				neg	neg
Bartonella vinsonii	Proteobacteria	Non	neg																neg
Bavariicoccus seileri	Firmicutes	Rare	+		+							+						+
Bdellovibrio bacteriovorus	Bdellovibrionota	Moderate	neg
Beduinella massiliensis	Firmicutes	Rare	neg
Beduini massiliensis	Firmicutes	Rare	neg																neg
Beduinibacterium massiliense	Firmicutes	Rare	+
Belnapia soli	Proteobacteria	Rare	neg																neg	red
Berryella intestinalis	Actinobacteria	Rare	+
Bhargavaea beijingensis	Firmicutes	Rare	+													neg			neg					neg
Bhargavaea cecembensis	Firmicutes	Non	+													neg			neg					+
Bifidobacterium adolescentis	Actinobacteria	Widespread	+		+							+				neg			neg
Bifidobacterium aerophilum	Actinobacteria	Rare	+		+							+							neg
Bifidobacterium angulatum	Actinobacteria	Moderate	+		+							+				neg			neg
Bifidobacterium animalis	Actinobacteria	Moderate	+		+	neg	neg					+				neg			neg
Bifidobacterium animalis subsp. lactis	Actinobacteria	Rare	+	+	Major(+)							+							neg
Bifidobacterium asteroides	Actinobacteria	Rare	+	minor(+)	+	neg	neg					+			minor(+)			minor				neg
Bifidobacterium avesanii	Actinobacteria	Rare	+		+							+							neg
Bifidobacterium biavatii	Actinobacteria	Rare	+		+							+							neg
Bifidobacterium bifidum	Actinobacteria	Widespread	+		+							+				neg			neg
Bifidobacterium boum	Actinobacteria	Rare	+	trace(+)	Major(+)	neg	neg					+				+			neg
Bifidobacterium breve	Actinobacteria	Widespread	+		+							+				neg			neg
Bifidobacterium callitrichidarum	Actinobacteria	Rare	+																neg
Bifidobacterium catenulatum	Actinobacteria	Moderate	+		Major(+)							+				neg			neg
Bifidobacterium catenulatum subsp. kashiwanohense	Actinobacteria	Rare	+		+							+							neg
Bifidobacterium choerinum	Actinobacteria	Rare	+	minor(+)	+	neg	neg					+			minor(+)			minor				neg
Bifidobacterium coryneforme	Actinobacteria	Rare	+		+							+							neg
Bifidobacterium cuniculi	Actinobacteria	Rare	+	minor(+)	+	neg	neg					+				+			neg
Bifidobacterium dentium	Actinobacteria	Moderate	+									+				neg			neg
Bifidobacterium eulemuris	Actinobacteria	Rare	+																neg
Bifidobacterium faecale	Actinobacteria	Rare	+		Major(+)							+							neg
Bifidobacterium gallicum	Actinobacteria	Rare	+	minor(+)	Major(+)							+						minor	neg					neg
Bifidobacterium imperatoris	Actinobacteria	Rare	+
Bifidobacterium indicum	Actinobacteria	Rare	+		+							+							neg
Bifidobacterium lemurum	Actinobacteria	Rare	+																neg
Bifidobacterium longum subsp. infantis	Actinobacteria	Moderate	+		+							+				neg			neg
Bifidobacterium longum subsp. longum	Actinobacteria	Widespread	+		+							+				neg			neg
Bifidobacterium longum subsp. suis	Actinobacteria	Rare	+	minor(+)	+	neg	neg					+			minor(+)			minor				neg
Bifidobacterium merycicum	Actinobacteria	Rare	+		+	neg	neg					+							neg
Bifidobacterium minimum	Actinobacteria	Rare	+	+	+							+							neg
Bifidobacterium mongoliense	Actinobacteria	Unlikely	+		+							+							neg
Bifidobacterium moukalabense	Actinobacteria	Rare	+																neg
Bifidobacterium myosotis	Actinobacteria	Rare	+																neg
Bifidobacterium pseudocatenulatum	Actinobacteria	Widespread	+		+											+			neg
Bifidobacterium pseudolongum	Actinobacteria	Minor	+		+							+							neg
Bifidobacterium pseudolongum subsp. globosum	Actinobacteria	Rare	+		Major(+)							+							neg
Bifidobacterium pullorum subsp. gallinarum	Actinobacteria	Rare	+		+							Major(+)							neg					neg
Bifidobacterium pullorum subsp. saeculare	Actinobacteria	Rare	+		+							+							neg
Bifidobacterium ramosum	Actinobacteria	Rare	+		+							+							neg
Bifidobacterium reuteri	Actinobacteria	Rare	+
Bifidobacterium ruminantium	Actinobacteria	Minor	+		Major(+)	neg	neg					+							neg
Bifidobacterium saguini	Actinobacteria	Rare	+
Bifidobacterium scardovii	Actinobacteria	Minor	+		+							+				neg			neg
Bifidobacterium stellenboschense	Actinobacteria	Rare	+
Bifidobacterium subtile	Actinobacteria	Rare	+	+	+							+							neg
Bifidobacterium thermacidophilum	Actinobacteria	Rare	+		Major(+)							+							neg					neg
Bifidobacterium thermophilum	Actinobacteria	Rare	+		+							+							neg
Bifissio spartinae	Bacteroidetes	Rare	neg
Bilophila wadsworthia	Desulfobacterota	Widespread	neg		+							neg			trace(+)				neg					+
Bittarella massiliensis	Firmicutes	Moderate	neg
Blastococcus massiliensis	Actinobacteria	Rare	+
Blastomonas natatoria	Proteobacteria	Unlikely	neg																neg	yellow, orange, brown				neg
Blautia brookingsii	Firmicutes	Rare	+
Blautia caecimuris	Firmicutes	Rare	+																neg
Blautia coccoides	Firmicutes	Minor	+		+	neg	neg					neg			Major(+)		neg	neg	neg					w(+)
Blautia faecicola	Firmicutes	Rare	+
Blautia faecis	Firmicutes	Rare	+		+							+							neg
Blautia glucerasea	Firmicutes	Rare	+	+	Major(+)							+							neg
Blautia hansenii	Firmicutes	Moderate	+		minor(+)							Major(+)			minor(+)				neg				neg	+
Blautia hominis	Firmicutes	Rare	+																neg
Blautia hydrogenotrophica	Firmicutes	Moderate	+		Major(+)			trace(+)		minor(+)		minor(+)						minor	neg
Blautia intestinalis	Firmicutes	Rare	+				+													neg
Blautia liquoris	Firmicutes	Rare	+		+
Blautia luti	Firmicutes	Minor	+	neg	Major(+)							minor(+)			+			minor	neg			minor(+)	+
Blautia marasmi	Firmicutes	Rare	+
Blautia massiliensis	Firmicutes	Moderate	neg																neg
Blautia obeum	Firmicutes	Widespread	+		Major(+)	+						minor(+)			minor(+)			+	neg					d(+)
Blautia phocaeensis	Firmicutes	Rare	+
Blautia producta	Firmicutes	Widespread	+		+							Major(+)				neg			neg
Blautia provencensis	Firmicutes	Rare	+
Blautia pseudococcoides	Firmicutes	Rare	+																neg
Blautia schinkii	Firmicutes	Rare	+		+														neg
Blautia stercoris	Firmicutes	Minor	+		Major(+)														neg
Blautia wexlerae	Firmicutes	Moderate	+		Major(+)										+				neg
Bordetella bronchiseptica	Proteobacteria	Non	neg																		+	+
Bordetella hinzii	Proteobacteria	Unlikely	neg																neg
Bordetella trematum	Proteobacteria	Non	neg													neg			neg		+	+
Bosea massiliensis	Proteobacteria	Rare	neg																	neg
Brachybacterium conglomeratum	Actinobacteria	Rare	+													d			+	yellow, pink, yellow-green				d(+)
Brachybacterium faecium	Actinobacteria	Unlikely	+													neg								neg
Brachybacterium ginsengisoli	Actinobacteria	Unlikely	+																neg
Brachybacterium massiliense	Actinobacteria	Rare	+
Brachybacterium muris	Actinobacteria	Rare	+													neg			neg	light yellow				neg
Brachybacterium paraconglomeratum	Actinobacteria	Rare	+													neg			+					+
Brachymonas chironomi	Proteobacteria	Unlikely	neg													+			neg					neg
Brachyspira aalborgi	Spirochaetes	Rare	neg		+		+												neg			+	+
Brachyspira hyodysenteriae	Spirochaetes	Rare	neg		+		+												d(+)			+	+
Brachyspira pilosicoli	Spirochaetes	Unlikely	neg		Major(+)		minor(+)	neg	neg			neg			neg		neg	minor	neg			+	Major(+)	+
Bradyrhizobium denitrificans	Proteobacteria	Rare	neg																neg
Bradyrhizobium elkanii	Proteobacteria	Rare	neg																neg
Bradyrhizobium ganzhouense	Proteobacteria	Unlikely	neg
Bradyrhizobium icense	Proteobacteria	Unlikely	neg
Bradyrhizobium japonicum	Proteobacteria	Rare	neg																neg					neg
Bradyrhizobium neotropicale	Proteobacteria	Rare	neg
Brassicibacter mesophilus	Firmicutes	Rare	neg	+	+	Major(+)				+						neg		+	+		+			+
Brenneria populi Li et al. 2015	Proteobacteria	Rare	neg													+			neg					neg
Brevibacillus agri	Firmicutes	Unlikely	+													neg			neg	neg				neg
Brevibacillus borstelensis	Firmicutes	Rare	+													vr			neg	brown-red				neg
Brevibacillus brevis	Firmicutes	Rare	vr													neg			neg					neg
Brevibacillus centrosporus	Firmicutes	Unlikely	+													neg			neg	neg				neg
Brevibacillus choshinensis	Firmicutes	Rare	+													neg				pale yellow
Brevibacillus formosus	Firmicutes	Unlikely	+													neg			neg	neg				neg
Brevibacillus laterosporus	Firmicutes	Rare	vr													neg			neg
Brevibacillus massiliensis	Firmicutes	Rare	+																neg					neg
Brevibacillus parabrevis	Firmicutes	Unlikely	vr													neg			neg					neg
Brevibacillus thermoruber	Firmicutes	Non	+													neg			neg	red				neg
Brevibacterium aurantiacum	Actinobacteria	Unlikely	+																	orange				+
Brevibacterium casei	Actinobacteria	Rare	+													+			neg					neg
Brevibacterium celere	Actinobacteria	Rare	+
Brevibacterium epidermidis	Actinobacteria	Rare	+													+			neg					neg
Brevibacterium ihuae	Actinobacteria	Rare	+
Brevibacterium iodinum	Actinobacteria	Unlikely	vr													neg			neg					neg
Brevibacterium linens	Actinobacteria	Unlikely	+																	orange
Brevibacterium luteolum	Actinobacteria	Rare	+																neg	yellow
Brevibacterium mcbrellneri	Actinobacteria	Unlikely	+																neg					neg
Brevibacterium otitidis	Actinobacteria	Non	+																	yellow
Brevibacterium paucivorans	Actinobacteria	Rare	+
Brevibacterium pityocampae	Actinobacteria	Rare	+													neg			neg	yellow				neg
Brevibacterium ravenspurgense	Actinobacteria	Rare	+																neg
Brevibacterium samyangense	Actinobacteria	Rare	+																	yellow
Brevibacterium sanguinis	Actinobacteria	Rare	+
Brevibacterium senegalense	Actinobacteria	Rare	+
Brevundimonas aurantiaca	Proteobacteria	Rare	neg																	dark golden
Brevundimonas bacteroides	Proteobacteria	Rare	neg																	cream, yellow, orange
Brevundimonas bullata	Proteobacteria	Rare	neg													+			neg		+			neg
Brevundimonas diminuta	Proteobacteria	Rare	neg																neg	cream
Brevundimonas intermedia	Proteobacteria	Rare	neg																	neg
Brevundimonas nasdae	Proteobacteria	Rare	neg																neg	yellow
Brevundimonas terrae	Proteobacteria	Rare	neg																neg	pink, yellow, orange, brown				neg
Brevundimonas vesicularis	Proteobacteria	Rare	neg																neg	cream
Brochothrix thermosphacta	Firmicutes	Unlikely	+		+							Major(+)				+			neg	neg				neg
Brucella anthropi	Proteobacteria	Unlikely	neg																neg					vr
Brucella cytisi	Proteobacteria	Rare	neg													+			+
Brucella melitensis	Proteobacteria	Non	neg													neg			neg	golden yellow				neg
Brucella tritici	Proteobacteria	Unlikely	neg																neg	neg				neg
Buchnera aphidicola	Proteobacteria	Non	neg
Bulleidia extructa	Firmicutes	Rare	+		+							+			trace(+)				neg					neg
Burkholderia arboris	Proteobacteria	Rare	neg																neg	purple (variable)
Burkholderia cepacia	Proteobacteria	Rare	neg																neg	pink				neg
Burkholderia gladioli	Proteobacteria	Unlikely	neg																neg	neg				neg
Burkholderia mallei	Proteobacteria	Unlikely	neg
Burkholderia multivorans	Proteobacteria	Rare	neg																neg					neg
Burkholderia pseudomallei	Proteobacteria	Unlikely	neg
Burkholderia pyrrocinia	Proteobacteria	Unlikely	neg																neg	neg				+
Burkholderia vietnamiensis	Proteobacteria	Rare	neg																	neg
Buttiauxella agrestis	Proteobacteria	Rare	neg													neg			neg	neg				neg
Butyribacter intestini	Firmicutes	Rare	+		+		+					+							neg
Butyricicoccus faecihominis	Firmicutes	Rare	+	minor(+)			Major(+)												+			+	+	neg
Butyricicoccus porcorum	Firmicutes	Rare	+				Major(+)												neg			+	+
Butyricicoccus pullicaecorum	Firmicutes	Minor	+	minor(+)			Major(+)															+	+
Butyricimonas faecalis	Bacteroidetes	Rare	neg		+	Major(+)	+	+	+	+									+	neg
Butyricimonas faecihominis	Bacteroidetes	Rare	neg		+	+	Major(+)	Major(+)		Major(+)					+				+	neg
Butyricimonas paravirosa	Bacteroidetes	Rare	neg		+	+	Major(+)	Major(+)		Major(+)					+				+	neg
Butyricimonas phoceensis	Bacteroidetes	Rare	neg																+
Butyricimonas synergistica	Bacteroidetes	Minor	neg		+	+	Major(+)	Major(+)		Major(+)					+				+	neg
Butyricimonas virosa	Bacteroidetes	Moderate	neg		+	+	Major(+)	Major(+)		Major(+)					+				+
Butyrivibrio crossotus	Firmicutes	Widespread	neg		+		+												neg					neg
Butyrivibrio fibrisolvens	Firmicutes	Minor	neg	+	+	neg	Major(+)					minor(+)				neg			neg			Major(+)	neg	neg
Butyrivibrio hungatei	Firmicutes	Unlikely	neg	+	+		+					neg			neg			neg						neg
Butyrivibrio proteoclasticus	Firmicutes	Rare	+	+	+	+	+								trace(+)				neg		neg
Caballeronia novacaledonica	Proteobacteria	Rare	neg																neg
Caecibacter massiliensis	Firmicutes	Rare
Caldibacillus thermoamylovorans	Firmicutes	Unlikely	+													+			neg					neg
Caldicellulosiruptor diazotrophicus	Firmicutes	Non	+		+
Caldicoprobacter faecalis	Firmicutes	Unlikely	neg		+							+						+				+	+
Caloranaerobacter azorensis	Firmicutes	Non	neg		Major(+)	minor(+)	minor(+)			+														+
Campylobacter avium	Proteobacteria	Non	neg																					neg
Campylobacter coli	Proteobacteria	Unlikely	neg													neg			neg					vr
Campylobacter concisus	Proteobacteria	Minor	neg		+										+	neg			neg			+	+	+
Campylobacter curvus	Proteobacteria	Rare	neg	+	Major(+)										+	neg			neg			+	+	+
Campylobacter faecalis	Proteobacteria	Rare	neg													neg			neg
Campylobacter fetus subsp. fetus	Proteobacteria	Rare	neg													neg			neg					neg
Campylobacter gracilis	Proteobacteria	Minor	neg												+	neg			neg				+	+
Campylobacter hominis	Proteobacteria	Minor	neg													neg			neg					neg
Campylobacter hyointestinalis subsp. hyointestinalis	Proteobacteria	Unlikely	neg													neg			neg	yellow (usually)				vr
Campylobacter jejuni subsp. doylei	Proteobacteria	Rare	neg													neg			neg					neg
Campylobacter jejuni subsp. jejuni	Proteobacteria	Unlikely	neg													neg			neg					neg
Campylobacter lanienae	Proteobacteria	Rare	neg													neg			neg					neg
Campylobacter lari subsp. concheus	Proteobacteria	Rare	neg													neg			neg
Campylobacter lari subsp. lari	Proteobacteria	Rare	neg													neg			neg					neg
Campylobacter mucosalis	Proteobacteria	Rare	neg																	yellow				+
Campylobacter peloridis	Proteobacteria	Rare	neg													neg			neg
Campylobacter rectus	Proteobacteria	Rare	neg												Major(+)	neg			neg				+	+
Campylobacter showae	Proteobacteria	Rare	neg												+	neg			neg					+
Campylobacter sputorum	Proteobacteria	Non	neg																					d(+)
Campylobacter troglodytis	Proteobacteria	Rare	neg																neg
Campylobacter upsaliensis	Proteobacteria	Rare	neg													neg			neg					neg
Campylobacter ureolyticus	Proteobacteria	Minor	neg												+	neg			neg	neg				neg
Candidatus Babela massiliensis	Candidatus Dependentiae	Unlikely	neg
Candidatus Dorea massiliensis	Firmicutes	Rare	+
Candidatus Stoquefichus massiliensis	Firmicutes	Rare	+
Capnocytophaga canimorsus	Bacteroidetes	Unlikely	neg																neg					neg
Capnocytophaga gingivalis	Bacteroidetes	Non	neg		+	minor(+)						minor(+)			+				neg	orange
Capnocytophaga granulosa	Bacteroidetes	Rare	neg		+										+				neg	yellow, orange				neg
Capnocytophaga leadbetteri	Bacteroidetes	Rare	neg																neg	beige to yellow-orange
Capnocytophaga ochracea	Bacteroidetes	Rare	neg		+							minor(+)			+	neg			neg	yellow, orange
Capnocytophaga sputigena	Bacteroidetes	Rare	neg		+							minor(+)			+	neg			neg	yellow, orange
Capnocytophaga stomatis	Bacteroidetes	Unlikely	neg																neg
Caproicibacter fermentans	Firmicutes	Rare	neg		+		+					+										+	+
Cardiobacterium hominis	Proteobacteria	Rare	neg	minor(+)		minor(+)						Major(+)		minor(+)					w					+
Cardiobacterium valvarum	Proteobacteria	Rare	neg																+					+
Carnobacterium divergens	Firmicutes	Non	+		+							Major(+)				+		+	neg					neg
Carnobacterium inhibens	Firmicutes	Rare	+													neg								neg
Carnobacterium maltaromaticum	Firmicutes	Unlikely	+									Major(+)
Carnobacterium mobile	Firmicutes	Non	+									Major(+)				neg			neg					neg
Casaltella massiliensis	Firmicutes	Rare	neg																+
Catenibacillus scindens	Firmicutes	Rare	+		+		+												neg
Catenibacterium mitsuokai	Firmicutes	Moderate	+		+		+	+											neg					neg
Catenulispora acidiphila	Actinobacteria	Unlikely	+																					+
Catonella morbi	Firmicutes	Rare	neg	+	+							+							neg				+	neg
Caulobacter vibrioides	Proteobacteria	Unlikely	neg
Cedecea davisae	Proteobacteria	Rare	neg													vr			neg	neg				neg
Cedecea lapagei	Proteobacteria	Rare	neg													+			neg	neg				neg
Cedecea neteri	Proteobacteria	Rare	neg													+			neg	neg				neg
Cellulomonas carbonis	Actinobacteria	Unlikely	+													neg			neg		+			+
Cellulomonas composti	Actinobacteria	Rare	+
Cellulomonas denverensis	Actinobacteria	Rare	+
Cellulomonas fimi	Actinobacteria	Rare	+
Cellulomonas flavigena	Actinobacteria	Rare	+		+															lemon yellow
Cellulomonas hominis	Actinobacteria	Rare	+																	light yellow
Cellulomonas massiliensis	Actinobacteria	Rare	+																neg
Cellulomonas parahominis	Actinobacteria	Rare	+
Cellulomonas timonensis	Actinobacteria	Rare	+																+
Cellulosilyticum lentocellum	Firmicutes	Rare	neg		Major(+)		neg					minor(+)			minor(+)			+	neg			+	+
Cellulosilyticum ruminicola	Firmicutes	Rare	neg	+	+							trace(+)			trace(+)	neg		trace	neg	yellow-green		+
Cellulosimicrobium cellulans	Actinobacteria	Rare	+	minor(+)	Major(+)							+				neg		minor				+
Centipeda periodontii	Firmicutes	Rare	neg		minor(+)	+						minor(+)			minor(+)				neg					neg
Cerasibacillus quisquiliarum	Firmicutes	Non	+													neg			neg	yellow-brown				neg
Cetobacterium somerae	Fusobacteria	Rare	neg		Major(+)	minor(+)	minor(+)								trace(+)				vr
Chelatococcus asaccharovorans	Proteobacteria	Unlikely	neg																					neg
Chitinophaga agri	Bacteroidetes	Unlikely	neg																	yellow
Chlamydia trachomatis	Chlamydiae	Non	neg
Chloracidobacterium thermophilum	Acidobacteria	Non	neg																	green-brown
Christensenella hongkongensis	Firmicutes	Minor	+																neg
Christensenella massiliensis	Firmicutes	Rare	neg
Christensenella minuta	Firmicutes	Minor	neg		Major(+)		minor(+)												neg
Christensenella timonensis	Firmicutes	Minor	neg
Chromobacterium violaceum	Proteobacteria	Unlikely	neg																neg	violet
Chromohalobacter japonicus	Proteobacteria	Unlikely	neg													neg			neg					neg
Chromohalobacter salexigens	Proteobacteria	Unlikely	neg													neg			neg					+
Chryseobacterium gallinarum	Bacteroidetes	Unlikely	neg																+	yellow				neg
Chryseobacterium gleum	Bacteroidetes	Unlikely	neg																+	bright yellow				neg
Chryseobacterium hominis	Bacteroidetes	Rare	neg																+	+
Chryseobacterium indologenes	Bacteroidetes	Rare	neg																+	deep orange
Chryseobacterium oranimense	Bacteroidetes	Rare	neg													neg			+	orange				neg
Chryseobacterium taklimakanense	Bacteroidetes	Rare	neg													+			+					neg
Chryseobacterium viscerum	Bacteroidetes	Non	neg																+	brown				neg
Chryseomicrobium amylolyticum	Firmicutes	Rare	+													neg			neg					neg
Citrobacter amalonaticus	Proteobacteria	Rare	neg													neg			+	neg				neg
Citrobacter braakii	Proteobacteria	Rare	neg													neg			d(neg)	neg				vr
Citrobacter europaeus	Proteobacteria	Rare	neg													neg			neg					+
Citrobacter farmeri	Proteobacteria	Minor	neg													+			+	neg				neg
Citrobacter freundii	Proteobacteria	Minor	neg													vr			d(neg)	neg				+
Citrobacter gillenii	Proteobacteria	Rare	neg													neg			neg	neg				+
Citrobacter intermedius	Proteobacteria	Unlikely	neg
Citrobacter koseri	Proteobacteria	Minor	neg													neg			+	neg				neg
Citrobacter murliniae	Proteobacteria	Rare	neg													neg			+	neg				d(+)
Citrobacter pasteurii	Proteobacteria	Rare	neg													neg			neg					+
Citrobacter portucalensis	Proteobacteria	Rare	neg													neg			neg					+
Citrobacter rodentium	Proteobacteria	Rare	neg													neg			neg					neg
Citrobacter sedlakii	Proteobacteria	Rare	neg													neg			+	neg				neg
Citrobacter werkmanii	Proteobacteria	Rare	neg													+			neg	neg				+
Citrobacter youngae	Proteobacteria	Rare	neg													neg			neg	neg				+
Citroniella saccharovorans	Firmicutes	Rare	+		Major(+)														+
Cloacibacillus evryensis	Synergistetes	Minor	neg		Major(+)	neg	+		neg													+	+
Cloacibacillus porcorum	Synergistetes	Rare	neg	+	+	+	+
Cloacibacterium normanense	Bacteroidetes	Rare	neg											Major(+)		neg			+	yellow
Clostridioides difficile	Firmicutes	Widespread	+	neg					neg			neg						minor	neg	fluorescent			+	vr
Clostridioides mangenotii	Firmicutes	Rare	+	minor(+)	Major(+)	minor(+)		minor(+)		minor(+)									+				+	+
Clostridium acetobutylicum	Firmicutes	Rare	+		+		+									+	Major	+	neg	yellow		+	+	neg
Clostridium amazonense	Firmicutes	Rare	+		Major(+)		Major(+)
Clostridium amazonitimonense	Firmicutes	Rare	+
Clostridium aminobutyricum	Firmicutes	Rare	+				+												+		+			+
Clostridium aminophilum	Firmicutes	Rare	+		+		+					trace(+)			trace(+)				+		+		neg	+
Clostridium amylolyticum	Firmicutes	Rare	+		+													+	neg			+	+	+
Clostridium anorexicamassiliense	Firmicutes	Rare	+
Clostridium argentinense	Firmicutes	Rare	+		+		+	+		+									neg
Clostridium aurantibutyricum	Firmicutes	Rare	+		+	minor(+)	minor(+)					+			minor(+)		+		neg				+
Clostridium autoethanogenum	Firmicutes	Rare	+		+													+
Clostridium baratii	Firmicutes	Minor	+	minor(+)	+	minor(+)	+					+			minor(+)	d	neg		neg	neg			+
Clostridium beijerinckii	Firmicutes	Minor	+	minor(+)	+	trace(+)	+	minor(+)		minor(+)		minor(+)			minor(+)			minor	neg	neg			+	neg
Clostridium boliviensis	Firmicutes	Rare	+
Clostridium bornimense	Firmicutes	Rare	vr	+		+						+						+	neg			+	+
Clostridium botulinum Gp I	Firmicutes	Unlikely	+		Major(+)	trace(+)	Major(+)	+	trace(+)	+		minor(+)			minor(+)		minor	minor	(d)				+	+
Clostridium botulinum Gp II	Firmicutes	Unlikely	+		Major(+)		Major(+)												neg				Major(+)
Clostridium botulinum Gp III	Firmicutes	Unlikely	+		+	+	Major(+)		trace(+)			trace(+)			trace(+)				neg				Major(+)	vr
Clostridium botulinum Gp IV	Firmicutes	Unlikely	+		+		+	+		+							+	+	neg				+	+
Clostridium budayi	Firmicutes	Rare	+				+												neg				+
Clostridium butyricum	Firmicutes	Widespread	+	+	+	minor(+)	+					minor(+)			minor(+)		minor	minor	+				+	neg
Clostridium cadaveris	Firmicutes	Rare	+	trace(+)	+	trace(+)	+					trace(+)			trace(+)		+	+					+	+
Clostridium cagae	Firmicutes	Rare	+
Clostridium carboxidivorans	Firmicutes	Rare	+		+		+									neg	+	+	neg
Clostridium carnis	Firmicutes	Rare	+	trace(+)	+		+					+			trace(+)				neg				+
Clostridium celatum	Firmicutes	Minor	+	+	+		minor(+)								trace(+)			minor					+	vr
Clostridium cellulosi	Firmicutes	Unlikely	neg		+											+		+	neg			+	+
Clostridium cellulovorans	Firmicutes	Rare	neg	+	+		+					+										+	+
Clostridium chartatabidum	Firmicutes	Rare	+		+		+											+	neg				Major(+)
Clostridium chauvoei	Firmicutes	Rare	+	+	+		+					trace(+)			trace(+)		+		+			+	+
Clostridium cochlearium	Firmicutes	Minor	+	minor(+)	+	+	+					minor(+)			minor(+)		minor		neg				+	+
Clostridium cocleatum	Firmicutes	Rare	+	+	+	neg	neg	neg	neg	neg		neg			neg	d			neg		neg		+	neg
Clostridium colicanis	Firmicutes	Rare	neg																neg
Clostridium colinum	Firmicutes	Rare	+	+	+														neg
Clostridium combesii	Firmicutes	Rare	+	minor(+)	+	minor(+)	+	+		+		+					+	+	neg		+			d(+)
Clostridium culturomicium	Firmicutes	Rare	+
Clostridium dakarense	Firmicutes	Rare	+																neg	neg
Clostridium diolis	Firmicutes	Rare	+		+		+									neg
Clostridium disporicum	Firmicutes	Minor	+		+		+					+			minor(+)				neg				+
Clostridium drakei	Firmicutes	Unlikely	+		+											neg	+	+	neg
Clostridium estertheticum	Firmicutes	Unlikely	+	minor(+)	+		+					minor(+)					minor	minor				+	+
Clostridium fallax	Firmicutes	Rare	+		+		+										+		+				+	+
Clostridium felsineum	Firmicutes	Rare	+		+	minor(+)	minor(+)	minor(+)		minor(+)		minor(+)			minor(+)	d(+)		minor					+
Clostridium fessum	Firmicutes	Rare	+																neg
Clostridium gasigenes	Firmicutes	Unlikely	+		+		+					+					+	+				+	+
Clostridium haemolyticum	Firmicutes	Rare	+		+	+	+																+
Clostridium herbivorans	Firmicutes	Rare	+	+			+											minor	neg				minor(+)
Clostridium hylemonae	Firmicutes	Minor	+		+	+	+	+		+									neg					+
Clostridium ihumii	Firmicutes	Rare	+																neg
Clostridium innocuum	Firmicutes	Widespread	+		+		+					minor(+)			minor(+)				neg				+
Clostridium intestinale	Firmicutes	Rare	+		+	minor(+)		minor(+)		minor(+)		minor(+)							neg				minor(+)	neg
Clostridium isatidis	Firmicutes	Unlikely	+	+	+							+						+				+	+
Clostridium jeddahense	Firmicutes	Rare	+																+
Clostridium jeddahitimonense	Firmicutes	Rare	+
Clostridium kluyveri	Firmicutes	Unlikely	vr				+												neg		minor		+
Clostridium leptum	Firmicutes	Widespread	+		+							minor(+)			minor(+)				neg				neg
Clostridium magnum	Firmicutes	Rare	neg		+																		+
Clostridium malenominatum	Firmicutes	Rare	+	minor(+)	+	minor(+)	Major(+)	minor(+)		minor(+)		minor(+)					trace						+	d(+)
Clostridium manihotivorum	Firmicutes	Rare	+		+	+	+											+	neg			+	+	neg
Clostridium massiliamazoniense	Firmicutes	Rare	+																+
Clostridium massiliodielmoense	Firmicutes	Rare	+
Clostridium mediterraneense	Firmicutes	Rare	+
Clostridium merdae	Firmicutes	Rare	+
Clostridium metallolevans	Firmicutes	Rare	+				+					+					+							neg
Clostridium methoxybenzovorans	Firmicutes	Rare	+	neg	+		neg											neg				neg	neg
Clostridium methylpentosum	Firmicutes	Moderate	+		+	+													neg			+	+
Clostridium minihomine	Firmicutes	Rare	+
Clostridium moniliforme	Firmicutes	Rare	+	trace(+)	+	trace(+)	+					+			trace(+)	neg	+		neg		+		+	+
Clostridium neonatale	Firmicutes	Minor	+		+		+					+			trace(+)				neg				+
Clostridium niameyense	Firmicutes	Rare	+																neg
Clostridium nigeriense	Firmicutes	Rare	+
Clostridium nitritogenes	Firmicutes	Rare	+				+												neg				neg
Clostridium novyi A	Firmicutes	Rare	+		minor(+)	+	Major(+)		minor(+)														Major(+)
Clostridium oceanicum	Firmicutes	Rare	+		+	minor(+)	+	minor(+)	trace(+)	minor(+)		minor(+)			minor(+)		minor	minor	neg		+		+	d(+)
Clostridium paraputrificum	Firmicutes	Moderate	+		+		+					+			minor(+)	d			neg				+
Clostridium pasteurianum	Firmicutes	Rare	+	minor(+)	+		+									+		+	neg		neg	+	+	neg
Clostridium perfringens	Firmicutes	Widespread	+		+	minor(+)	+					+			minor(+)				neg	+			+
Clostridium phoceensis	Firmicutes	Rare	neg
Clostridium polyendosporum	Firmicutes	Rare	+		+		+					+					+	+	neg			+	+	neg
Clostridium polynesiense	Firmicutes	Rare	+																+
Clostridium polysaccharolyticum	Firmicutes	Rare	neg	+			+									w			neg					neg
Clostridium populeti	Firmicutes	Rare	neg	neg			+					+		neg	trace(+)			trace		yellow		+	+
Clostridium punense	Firmicutes	Rare	+	minor(+)	+	minor(+)	+	minor(+)		+					minor(+)							+	+	w(+)
Clostridium putrefaciens	Firmicutes	Minor	+	+	+							+			+						minor		neg	w(+)
Clostridium rectalis	Firmicutes	Rare	+
Clostridium roseum	Firmicutes	Rare	+		+		+								minor(+)		+	minor		orange-pink			+	+
Clostridium saccharobutylicum	Firmicutes	Unlikely	+		+		+										+	+	neg			+	+
Clostridium saccharoperbutylacetonicum	Firmicutes	Rare	+		+		+										+	+	neg		+	+	+	+
Clostridium sardiniense	Firmicutes	Rare	+	trace(+)	+	trace(+)	+					+							+		+		+
Clostridium sartagoforme	Firmicutes	Minor	+	+	+		+					neg											+
Clostridium saudiense	Firmicutes	Minor	+																neg
Clostridium scatologenes	Firmicutes	Rare	+		+	minor(+)	minor(+)	minor(+)	minor(+)	minor(+)		minor(+)			minor(+)				neg		+		+	+
Clostridium schirmacherense	Firmicutes	Unlikely	+	+	+	+	+	+		+									neg			+	+	+
Clostridium scindens	Firmicutes	Moderate	+		+		minor(+)											+	neg					+
Clostridium senegalense	Firmicutes	Rare	+																neg	neg
Clostridium septicum	Firmicutes	Rare	+	+	+	minor(+)	+					minor(+)				neg		minor	neg				+
Clostridium sporogenes	Firmicutes	Minor	+		+	minor(+)	+	minor(+)	minor(+)	minor(+)		minor(+)			minor(+)		minor	minor	neg		+		+	+
Clostridium sporosphaeroides	Firmicutes	Minor	+		+	minor(+)	+												neg		+	+	+	+
Clostridium subterminale	Firmicutes	Rare	+	minor(+)	+	minor(+)	+	minor(+)		+		minor(+)			minor(+)			minor	neg		+		+	d(+)
Clostridium sulfidigenes	Firmicutes	Rare	+		+	+	+		+						+			+						+
Clostridium symbiosum	Firmicutes	Widespread	neg		+	neg	+					minor(+)			neg	vr	minor	minor	neg		+		+	w(+)
Clostridium taeniosporum	Firmicutes	Unlikely	+		+		+												neg
Clostridium tertium	Firmicutes	Moderate	+	minor(+)	+		+					+			minor(+)	neg		minor	neg				+	neg
Clostridium tetani	Firmicutes	Unlikely	+		+	minor(+)	+					minor(+)			minor(+)		minor	minor	(d)		+		+	+
Clostridium thermarum	Firmicutes	Unlikely	+	+	+													+
Clostridium thermobutyricum	Firmicutes	Rare	vr		minor(+)	+	+		trace(+)			minor(+)							neg			+	+
Clostridium thiosulfatireducens	Firmicutes	Rare	+		+		+	+		+												+		+
Clostridium transplantifaecale	Firmicutes	Rare	+
Clostridium tyrobutyricum	Firmicutes	Rare	+	trace(+)	+	minor(+)	+					minor(+)			minor(+)				neg				+
Clostridium vincentii	Firmicutes	Rare	+	+	+		+												neg			+	+
Clostridium viride	Firmicutes	Rare	+		+	+	minor(+)		+										neg		+			vr
Colibacter massiliensis	Firmicutes	Rare	+
Colidextribacter massiliensis	Firmicutes	Rare	neg
Collinsella aerofaciens	Actinobacteria	Widespread	+													neg			neg
Collinsella bouchesdurhonensis	Actinobacteria	Minor	+																neg
Collinsella ihumii	Actinobacteria	Rare	+
Collinsella intestinalis	Actinobacteria	Moderate	+																neg
Collinsella massiliensis	Actinobacteria	Rare	+																neg
Collinsella phocaeensis	Actinobacteria	Rare	neg
Collinsella provencensis	Actinobacteria	Rare	+
Collinsella stercoris	Actinobacteria	Minor	+																neg
Collinsella tanakaei	Actinobacteria	Minor	+	+	+							+							neg
Collinsella vaginalis	Actinobacteria	Rare	+
Comamonas aquatica	Proteobacteria	Non	neg																neg					neg
Comamonas denitrificans	Proteobacteria	Rare	neg																	variable
Comamonas kerstersii	Proteobacteria	Rare	neg																neg					neg
Comamonas koreensis	Proteobacteria	Unlikely	neg													neg			neg	neg				neg
Comamonas terrigena	Proteobacteria	Unlikely	neg																neg	neg				neg
Comamonas testosteroni	Proteobacteria	Rare	neg																neg	neg
Comamonas thiooxydans	Proteobacteria	Rare	neg													neg			neg					+
Companilactobacillus alimentarius	Firmicutes	Rare	+									+				+
Companilactobacillus farciminis	Firmicutes	Rare	+									Major(+)				neg
Companilactobacillus mindensis	Firmicutes	Unlikely	+									Major(+)												neg
Companilactobacillus versmoldensis	Firmicutes	Unlikely	+									+
Conexibacter woesei	Actinobacteria	Rare	+
Congobacterium massiliense	Firmicutes	Rare	+
Coprobacillus cateniformis	Firmicutes	Moderate	+		+							+							neg					neg
Coprobacter fastidiosus	Bacteroidetes	Moderate	neg		+	+									minor(+)				neg	neg
Coprobacter secundus	Bacteroidetes	Moderate	neg	+	Major(+)										+
Coprobacter secundus subsp. similis	Bacteroidetes	Rare	neg		+	+									+				neg	neg
Coprococcus catus	Firmicutes	Widespread	+		minor(+)	+	+														neg			neg
Coprococcus comes	Firmicutes	Widespread	+		minor(+)		+					Major(+)												neg
Coprococcus eutactus	Firmicutes	Widespread	+	+	minor(+)		+					minor(+)		trace(+)	trace(+)	+		neg			neg			neg
Coprococcus phoceensis	Firmicutes	Rare	vr
Coraliomargarita akajimensis	Verrucomicrobia	Non	neg													+			neg					neg
Coriobacterium glomerans	Actinobacteria	Unlikely	+		+							+						+				+	+
Corynebacterium accolens	Actinobacteria	Rare	+													neg			neg					neg
Corynebacterium afermentans	Actinobacteria	Rare	+													neg			neg					neg
Corynebacterium ammoniagenes	Actinobacteria	Rare	+													+			neg					neg
Corynebacterium amycolatum	Actinobacteria	Rare	+													+			neg					neg
Corynebacterium appendicis	Actinobacteria	Rare	+			neg						Major(+)				+			neg
Corynebacterium argentoratense	Actinobacteria	Rare	+
Corynebacterium aurimucosum	Actinobacteria	Rare	+			neg						Major(+)				+			neg
Corynebacterium bouchesdurhonense	Actinobacteria	Rare	+
Corynebacterium bovis	Actinobacteria	Rare	+
Corynebacterium callunae	Actinobacteria	Unlikely	+
Corynebacterium casei	Actinobacteria	Rare	+
Corynebacterium coyleae	Actinobacteria	Rare	+			neg										neg
Corynebacterium cystitidis	Actinobacteria	Rare	+													neg			neg					neg
Corynebacterium diphtheriae	Actinobacteria	Non	vr			+
Corynebacterium doosanense	Actinobacteria	Rare	+
Corynebacterium durum	Actinobacteria	Minor	+			+									neg
Corynebacterium efficiens	Actinobacteria	Rare	+
Corynebacterium falsenii	Actinobacteria	Rare	+																	yellow
Corynebacterium flavescens	Actinobacteria	Rare	vr													+				yellow				neg
Corynebacterium freneyi	Actinobacteria	Rare	+													+
Corynebacterium genitalium	Actinobacteria	Rare	+
Corynebacterium glaucum	Actinobacteria	Rare	+			neg						Major(+)				+			neg
Corynebacterium glucuronolyticum	Actinobacteria	Rare	+
Corynebacterium glutamicum	Actinobacteria	Rare	+
Corynebacterium ihumii	Actinobacteria	Rare	+
Corynebacterium jeddahense	Actinobacteria	Rare	+
Corynebacterium jeikeium	Actinobacteria	Rare	+													neg			neg					neg
Corynebacterium kroppenstedtii	Actinobacteria	Minor	+			neg										+				neg
Corynebacterium lipophiloflavum	Actinobacteria	Rare	+																	yellow
Corynebacterium lujinxingii	Actinobacteria	Rare	+
Corynebacterium matruchotii	Actinobacteria	Unlikely	+													+
Corynebacterium minutissimum	Actinobacteria	Rare	+													+			neg	neg				neg
Corynebacterium mucifaciens	Actinobacteria	Rare	+													neg			neg
Corynebacterium neomassiliense	Actinobacteria	Rare	+
Corynebacterium otitidis	Actinobacteria	Rare	+																neg
Corynebacterium pacaense	Actinobacteria	Rare	+
Corynebacterium propinquum	Actinobacteria	Rare	+													neg
Corynebacterium provencense	Actinobacteria	Rare	+
Corynebacterium pseudodiphtheriticum	Actinobacteria	Rare	+			neg
Corynebacterium pseudogenitalium	Actinobacteria	Rare	+
Corynebacterium pyruviciproducens	Actinobacteria	Rare	+		+	neg								+
Corynebacterium riegelii	Actinobacteria	Rare	+			neg
Corynebacterium sanguinis	Actinobacteria	Rare	+
Corynebacterium simulans	Actinobacteria	Rare	+
Corynebacterium singulare	Actinobacteria	Rare	+
Corynebacterium stationis	Actinobacteria	Rare	+			neg										neg			neg	yellow
Corynebacterium striatum	Actinobacteria	Rare	+			neg										neg			neg	variable				neg
Corynebacterium suicordis	Actinobacteria	Rare	+
Corynebacterium sundsvallense	Actinobacteria	Rare	+			neg						Major(+)			minor(+)	neg
Corynebacterium tuberculostearicum	Actinobacteria	Rare	+													neg			neg
Corynebacterium ulcerans	Actinobacteria	Rare	+			+										neg
Corynebacterium urealyticum	Actinobacteria	Rare	+			neg										d
Corynebacterium ureicelerivorans	Actinobacteria	Rare	+													+
Corynebacterium urinapleomorphum	Actinobacteria	Rare	+																neg
Corynebacterium variabile	Actinobacteria	Unlikely	+													+
Corynebacterium wankanglinii	Actinobacteria	Rare	+
Corynebacterium xerosis	Actinobacteria	Rare	+			neg										+			neg					neg
Crassaminicella thermophila	Firmicutes	Unlikely	+		+																	+	+
Criibacterium bergeronii	Firmicutes	Rare	vr																+
Cronobacter condimenti	Proteobacteria	Unlikely	neg													+			+					neg
Cronobacter muytjensii	Proteobacteria	Rare	neg													+			+					neg
Cronobacter sakazakii	Proteobacteria	Minor	neg													+			neg	yellow				neg
Cronobacter turicensis	Proteobacteria	Rare	neg													neg			neg					neg
Cruoricaptor ignavus	Bacteroidetes	Rare	neg													neg			neg	orange-yellow				neg
Cryptobacterium curtum	Actinobacteria	Minor	+																neg		+
Culturomica massiliensis	Bacteroidetes	Rare	neg
Cupriavidus metallidurans	Proteobacteria	Unlikely	neg																neg					neg
Curtobacterium flaccumfaciens	Actinobacteria	Unlikely	+																neg	+	neg			+
Cutibacterium acnes	Actinobacteria	Moderate	+													neg			+
Cutibacterium acnes subsp. defendens	Actinobacteria	Rare	+		+	+													d(+)
Cutibacterium avidum	Actinobacteria	Rare	+																neg					+
Cutibacterium granulosum	Actinobacteria	Minor	+
Cytophaga hutchinsonii	Bacteroidetes	Rare	neg																	bright yellow
Dakarella massiliensis	Proteobacteria	Rare	neg																+
Dakotella fusiforme	Firmicutes	Rare	+		+	trace(+)	trace(+)
Dehalobacter restrictus	Firmicutes	Non	neg													neg
Dehalobacterium formicoaceticum	Firmicutes	Unlikely	+	+	+									trace(+)
Dehalococcoides mccartyi	Chloroflexi	Unlikely	unk
Deinococcus aquaticus	Deinococcus-Thermus	Unlikely	neg																neg	red
Deinococcus caeni	Deinococcus-Thermus	Unlikely	neg																neg	pink
Deinococcus geothermalis	Deinococcus-Thermus	Non	+																	orange
Deinococcus proteolyticus	Deinococcus-Thermus	Unlikely	+																	orange-red
Deinococcus reticulitermitis	Deinococcus-Thermus	Unlikely	neg																neg	red
Deinococcus wulumuqiensis	Deinococcus-Thermus	Unlikely	+																neg
Delftia acidovorans	Proteobacteria	Rare	neg																neg	neg				neg
Delftia lacustris	Proteobacteria	Unlikely	neg
Delftia tsuruhatensis	Proteobacteria	Rare	neg
Dellaglioa algida	Firmicutes	Rare	+									+				neg								neg
Denitrobacterium detoxificans	Actinobacteria	Rare	+		+														neg					neg
Dermabacter hominis	Actinobacteria	Rare	+													neg			neg					vr
Dermacoccus barathri	Actinobacteria	Non	+																	light yellow				neg
Dermacoccus nishinomiyaensis	Actinobacteria	Rare	+													neg			neg					neg
Desemzia incerta	Firmicutes	Rare	+									+				neg			neg	neg				neg
Desnuesiella massiliensis	Firmicutes	Rare	+																neg
Desulfitobacterium dichloroeliminans	Firmicutes	Unlikely	+
Desulfitobacterium hafniense	Firmicutes	Minor	neg																+
Desulfococcus multivorans	Proteobacteria	Rare	neg																					+
Desulfocurvibacter africanus	Proteobacteria	Unlikely	neg		+															neg				+
Desulfofarcimen acetoxidans	Firmicutes	Unlikely	neg																	+				+
Desulfomicrobium baculatum	Proteobacteria	Unlikely	neg		+																		+	+
Desulfomicrobium orale	Proteobacteria	Unlikely	neg		+
Desulforamulus reducens	Firmicutes	Unlikely	+		+
Desulforudis audaxviator	Firmicutes	Unlikely	+																					+
Desulfoscipio gibsoniae	Firmicutes	Rare	neg		+																			+
Desulfosporosinus youngiae	Firmicutes	Rare	neg																					+
Desulfotomaculum ruminis	Firmicutes	Unlikely	+
Desulfovibrio desulfuricans	Proteobacteria	Minor	neg		+															fluorescent				+
Desulfovibrio diazotrophicus	Proteobacteria	Rare	neg
Desulfovibrio fairfieldensis	Proteobacteria	Minor	neg																	fluorescent				+
Desulfovibrio intestinalis	Proteobacteria	Rare	neg																					+
Desulfovibrio legallii	Proteobacteria	Rare	+		+																	+	+	+
Desulfovibrio longreachensis	Proteobacteria	Rare	neg		+																			+
Desulfovibrio piger	Proteobacteria	Moderate	neg		+																			+
Desulfovibrio trichonymphae	Proteobacteria	Non	unk												+									+
Desulfovibrio vulgaris	Proteobacteria	Rare	neg		+																			+
Desulfurispirillum indicum	Chrysiogenetes	Unlikely	neg																		+
Desulfurobacterium thermolithotrophum	Aquificae	Non	neg
Devosia chinhatensis	Proteobacteria	Rare	neg																neg
Devosia limi	Proteobacteria	Unlikely	neg																neg
Devosia riboflavina	Proteobacteria	Unlikely	neg																neg
Dialister hominis	Firmicutes	Rare	neg		minor(+)	Major(+)													neg
Dialister invisus	Firmicutes	Moderate	neg		minor(+)	minor(+)													neg
Dialister massiliensis	Firmicutes	Rare	neg																neg
Dialister micraerophilus	Firmicutes	Rare	neg
Dialister pneumosintes	Firmicutes	Minor	neg		trace(+)	trace(+)						trace(+)			trace(+)				neg
Dialister propionicifaciens	Firmicutes	Rare	neg		+	+						+
Dialister succinatiphilus	Firmicutes	Minor	neg			trace(+)						trace(+)							neg
Dielma fastidiosa	Firmicutes	Minor	neg																neg
Dietzia cercidiphylli	Actinobacteria	Unlikely	+													neg			neg	reddish-orange				neg
Dietzia cinnamea	Actinobacteria	Rare	+													neg
Dietzia kunjamensis	Actinobacteria	Unlikely	+													neg			neg	coral-red				neg
Dietzia maris	Actinobacteria	Rare	+													neg								neg
Dietzia natronolimnaea	Actinobacteria	Rare	+
Dolosigranulum pigrum	Firmicutes	Unlikely	+													neg				neg
Dorea faecis	Firmicutes	Minor
Dorea formicigenerans	Firmicutes	Widespread	+	+	+		neg					+						+	neg
Dorea hylemonae	Firmicutes	Rare
Dorea longicatena	Firmicutes	Widespread	+	+	+													+	neg
Dorea phocaeensis	Firmicutes	Rare	neg
Dorea scindens	Firmicutes	Rare
Drancourtella massiliensis	Firmicutes	Rare	+																neg
Dubosiella newyorkensis	Firmicutes	Rare	+																neg
Duncaniella dubosii	Bacteroidetes	Unlikely	neg																neg	neg
Duncaniella muris	Bacteroidetes	Rare	neg																neg
Duodenibacillus massiliensis	Proteobacteria	Minor	+
Dyadobacter beijingensis	Bacteroidetes	Unlikely	neg													neg			neg	yellow				neg
Dyadobacter fermentans	Bacteroidetes	Unlikely	neg																neg	yellow
Dysgonomonas capnocytophagoides	Bacteroidetes	Rare	neg			+						+			+	neg			(d)					neg
Dysgonomonas gadei	Bacteroidetes	Rare	neg													neg			+	grey–white				neg
Dysgonomonas massiliensis	Bacteroidetes	Rare	neg
Dysgonomonas mossii	Bacteroidetes	Rare	neg													neg			(d)
Dysosmobacter welbionis	Firmicutes	Moderate	neg				+												neg	neg
Edwardsiella tarda	Proteobacteria	Minor	neg													neg			+		neg			+
Eggerthella guodeyinii	Actinobacteria	Rare	+
Eggerthella lenta	Actinobacteria	Widespread	+	neg	+		neg					+			+							neg	neg
Eggerthella sinensis	Actinobacteria	Rare	+																neg
Eggerthella timonensis	Actinobacteria	Rare	+																neg
Eggerthia catenaformis	Firmicutes	Minor	+	neg	minor(+)							Major(+)							neg					neg
Eikenella corrodens	Proteobacteria	Rare	neg																neg					+
Eisenbergiella massiliensis	Firmicutes	Moderate	neg
Eisenbergiella tayi	Firmicutes	Moderate	neg		minor(+)		Major(+)					minor(+)			minor(+)				neg	neg
Elizabethkingia meningoseptica	Bacteroidetes	Unlikely	neg													neg			w	yellow (variable)				neg
Elizabethkingia miricola	Bacteroidetes	Non	neg																(d)					neg
Ellagibacter isourolithinifaciens	Actinobacteria	Rare	+																neg
Elusimicrobium minutum	Elusimicrobia	Unlikely	neg		+							+						+					+	neg
Emergencia timonensis	Firmicutes	Minor	+
Empedobacter brevis	Bacteroidetes	Rare	neg																+					neg
Empedobacter falsenii	Bacteroidetes	Rare	neg													neg			+					neg
Enhydrobacter aerosaccus	Proteobacteria	Rare	neg																neg
Enorma massiliensis	Actinobacteria	Minor	+													vr			neg
Enorma phocaeensis	Actinobacteria	Rare	neg
Enorma timonensis	Actinobacteria	Rare	+																neg
Ensifer adhaerens	Proteobacteria	Unlikely	neg																neg
Enterobacter asburiae	Proteobacteria	Minor	neg													d(+)			neg	neg				neg
Enterobacter cancerogenus	Proteobacteria	Minor	neg													neg			neg	neg				neg
Enterobacter cloacae	Proteobacteria	Moderate	neg													+			neg					neg
Enterobacter cloacae subsp. dissolvens	Proteobacteria	Rare	neg													+			neg	neg				neg
Enterobacter himalayensis	Proteobacteria	Minor
Enterobacter hormaechei subsp. hormaechei	Proteobacteria	Minor	neg													+			neg					neg
Enterobacter hormaechei subsp. steigerwaltii	Proteobacteria	Rare	neg													+			neg					neg
Enterobacter hormaechei subsp. xiangfangensis	Proteobacteria	Rare	neg
Enterobacter kobei	Proteobacteria	Rare	neg													+			neg	neg				neg
Enterobacter ludwigii	Proteobacteria	Rare	neg													+			neg	neg				neg
Enterobacter massiliensis	Proteobacteria	Rare	neg													+			+	neg
Enterobacter mori	Proteobacteria	Rare	neg													+			neg
Enterobacter roggenkampii	Proteobacteria	Rare	neg
Enterobacter soli	Proteobacteria	Rare	neg													w			neg
Enterobacter timonensis	Proteobacteria	Rare	neg
Enterocloster aldenensis	Firmicutes	Minor	+																+
Enterocloster asparagiformis	Firmicutes	Moderate	+	minor(+)	Major(+)							Major(+)						+	neg				minor(+)
Enterocloster bolteae	Firmicutes	Widespread	+		Major(+)							Major(+)							neg
Enterocloster citroniae	Firmicutes	Moderate	+																+
Enterocloster clostridioformis	Firmicutes	Widespread	+		minor(+)	minor(+)	+					minor(+)			minor(+)	+	minor		d(neg)		neg		+	+
Enterocloster lavalensis	Firmicutes	Minor	+		Major(+)							minor(+)			minor(+)				+				+
Enterococcus asini	Firmicutes	Rare	+		minor(+)							Major(+)				+		+	neg	neg
Enterococcus avium	Firmicutes	Minor	+													+				neg				+
Enterococcus burkinafasonensis	Firmicutes	Rare	+
Enterococcus caccae	Firmicutes	Rare	+													+				neg
Enterococcus canintestini	Firmicutes	Rare	+													+
Enterococcus canis	Firmicutes	Rare	+									Major(+)				d				neg
Enterococcus casseliflavus	Firmicutes	Moderate	+													+				+ (variable)				neg
Enterococcus cecorum	Firmicutes	Rare	+													+				neg
Enterococcus columbae	Firmicutes	Rare	+													+				neg
Enterococcus devriesei	Firmicutes	Moderate	+													+
Enterococcus diestrammenae	Firmicutes	Rare	+									Major(+)
Enterococcus dispar	Firmicutes	Rare	+													+			neg	neg
Enterococcus durans	Firmicutes	Moderate	+													+			neg	neg
Enterococcus eurekensis	Firmicutes	Rare	+													neg			neg
Enterococcus faecalis	Firmicutes	Widespread	+													+			neg	neg
Enterococcus faecium	Firmicutes	Widespread	+													+			neg	neg
Enterococcus gallinarum	Firmicutes	Rare	+													+			neg	neg
Enterococcus gilvus	Firmicutes	Rare	+																	light yellow
Enterococcus haemoperoxidus	Firmicutes	Rare	+													+				yellow (variable)
Enterococcus hermanniensis	Firmicutes	Rare	+													+
Enterococcus hirae	Firmicutes	Minor	+													+				+
Enterococcus italicus	Firmicutes	Rare	+									Major(+)				+				neg
Enterococcus lactis	Firmicutes	Rare	+													+
Enterococcus malodoratus	Firmicutes	Rare	+									+				neg				neg				+
Enterococcus massiliensis	Firmicutes	Rare	+																	neg
Enterococcus mediterraneensis	Firmicutes	Rare	+																	green
Enterococcus moraviensis	Firmicutes	Rare	+													+				neg
Enterococcus mundtii	Firmicutes	Rare	+													+				yellow
Enterococcus pallens	Firmicutes	Rare	+									+								bright yellow
Enterococcus phoeniculicola	Firmicutes	Rare	+									Major(+)				neg			neg	neg				neg
Enterococcus pseudoavium	Firmicutes	Rare	+													+				neg
Enterococcus raffinosus	Firmicutes	Rare	+													+				neg
Enterococcus saccharolyticus	Firmicutes	Rare	+													neg				neg
Enterococcus saigonensis	Firmicutes	Unlikely	+													+				neg
Enterococcus sulfureus	Firmicutes	Rare	+																	yellow
Enterococcus thailandicus	Firmicutes	Rare	+													+				neg
Enterococcus timonensis	Firmicutes	Rare	+																neg
Enterococcus villorum	Firmicutes	Rare	+													+				neg
Enteroscipio rubneri	Actinobacteria	Rare	+																neg
Enterovibrio nigricans	Proteobacteria	Unlikely	neg													neg			neg	dark brown
Ereboglobus luteus	Verrucomicrobia	Unlikely	neg		+	+									minor(+)					bright yellow		+	neg
Erwinia billingiae	Proteobacteria	Unlikely	neg													+			neg	neg				neg
Erwinia tasmaniensis	Proteobacteria	Unlikely	neg													+			neg					neg
Erwinia teleogrylli	Proteobacteria	Rare	neg																neg					neg
Erysipelatoclostridium ramosum	Firmicutes	Widespread	+	+	+							minor(+)		minor(+)	minor(+)	neg		minor	neg		neg		neg	neg
Erysipelatoclostridium saccharogumia	Firmicutes	Minor
Erysipelatoclostridium spiroforme	Firmicutes	Minor
Erysipelothrix larvae	Firmicutes	Rare	+
Escherichia albertii	Proteobacteria	Minor	neg													neg			neg					neg
Escherichia coli	Proteobacteria	Widespread	neg		+							+			+	neg		+	+			+		neg
Escherichia dysenteriae	Proteobacteria	Rare
Escherichia fergusonii	Proteobacteria	Minor	neg													neg			+	neg				neg
Escherichia marmotae	Proteobacteria	Unlikely	neg													neg			neg					neg
Escherichia ruysiae	Proteobacteria	Rare	neg																					neg
Ethanoligenens harbinense	Firmicutes	Rare	+		+											+		Major	+				+	neg
Eubacterium barkeri	Firmicutes	Rare	+		minor(+)		+					+							neg		neg		+	neg
Eubacterium biforme	Firmicutes	Moderate	+				+					Major(+)							neg				+	neg
Eubacterium brachy	Firmicutes	Rare	+	trace(+)	+	trace(+)	trace(+)	+	trace(+)	+									neg				+
Eubacterium callanderi	Firmicutes	Minor	+	+	+		+					+							neg				+
Eubacterium cellulosolvens	Firmicutes	Minor	+	trace(+)	+		+					Major(+)			trace(+)	neg			neg	neg			trace(+)	neg
Eubacterium coprostanoligenes	Firmicutes	Minor	+	+	+										+		neg	neg	neg			minor(+)	+
Eubacterium dolichum	Firmicutes	Moderate	+				+												neg				neg
Eubacterium infirmum	Firmicutes	Rare	+		+		+												neg
Eubacterium limosum	Firmicutes	Moderate	+		+		+	trace(+)		trace(+)		+			trace(+)				neg		neg		+	d(+)
Eubacterium maltosivorans	Firmicutes	Rare	+		+		+												neg				+
Eubacterium multiforme	Firmicutes	Rare	+	trace(+)	+	trace(+)	+					+			trace(+)	d(neg)			neg				+
Eubacterium nodatum	Firmicutes	Rare	+	minor(+)	minor(+)		Major(+)								minor(+)				neg				neg
Eubacterium oxidoreducens	Firmicutes	Rare	+		+		+
Eubacterium plexicaudatum	Firmicutes	Rare	+		minor(+)		+							trace(+)	trace(+)								+
Eubacterium pyruvativorans	Firmicutes	Rare	+	+	+	+	+	+	+	+		+							neg		+
Eubacterium ramulus	Firmicutes	Moderate	+	neg	+							neg							neg				+	neg
Eubacterium rectale	Firmicutes	Widespread	+	minor(+)	+	neg	Major(+)					+				neg			neg		neg		+	neg
Eubacterium ruminantium	Firmicutes	Rare	+	+	+		+					+			minor(+)				neg		neg		trace(+)	neg
Eubacterium saphenum	Firmicutes	Rare	+		+		+												neg		neg		+
Eubacterium siraeum	Firmicutes	Widespread	+		+		minor(+)					minor(+)			minor(+)			+	neg				+	neg
Eubacterium sulci	Firmicutes	Rare	+		minor(+)		Major(+)								trace(+)	neg			neg				+	neg
Eubacterium tenue	Firmicutes	Minor	+	+	+	minor(+)	neg	minor(+)		minor(+)						neg	minor	minor	+		+		+	+
Eubacterium uniforme	Firmicutes	Rare	+	+	+							+				+		+	neg					neg
Eubacterium ventriosum	Firmicutes	Widespread	+	+	+		+					+			trace(+)	+			neg		neg		trace(+)	neg
Eubacterium xylanophilum	Firmicutes	Rare	+	+	Major(+)		+		neg			neg			neg	+		trace	neg
Eubacterium yurii	Firmicutes	Rare	+		+	+	Major(+)									neg			+	pale yellow				+
Ewingella americana	Proteobacteria	Rare	neg													+			neg					neg
Exiguobacterium aurantiacum	Firmicutes	Rare	+	+	+							+				+			neg	orange				neg
Exiguobacterium marinum	Firmicutes	Rare	vr																	deep orange
Exiguobacterium mexicanum	Firmicutes	Rare	+																	orange
Exiguobacterium undae	Firmicutes	Rare	+																	orange
Ezakiella coagulans	Bacteroidetes	Minor	neg	minor(+)	minor(+)							minor(+)			minor(+)				+					+
Ezakiella massiliensis	Bacteroidetes	Rare	+
Ezakiella peruensis	Firmicutes	Rare	+	+	+														+
Facklamia hominis	Firmicutes	Rare	+													neg			neg	neg
Facklamia languida	Firmicutes	Rare	+													neg
Faecalibacillus faecis	Firmicutes	Rare	+	+			+					+							neg				neg
Faecalibacillus intestinalis	Firmicutes	Rare	+																neg
Faecalibacterium prausnitzii	Firmicutes	Widespread	neg	+			+					+							neg				neg
Faecalibaculum rodentium	Firmicutes	Rare	+		minor(+)		minor(+)					+						minor	neg
Faecalicatena contorta	Firmicutes	Minor	+	+	+											d		+	neg	neg	neg			neg
Faecalicatena faecis	Firmicutes	Moderate
Faecalicatena fissicatena	Firmicutes	Minor	+		Major(+)														neg			+	+	+
Faecalicatena glycyrrhizinilyticum	Firmicutes	Minor
Faecalicatena gnavus	Firmicutes	Moderate
Faecalicatena lactaris	Firmicutes	Moderate
Faecalicatena orotica	Firmicutes	Minor	+	minor(+)	+	neg	neg					trace(+)			trace(+)	neg		Major	neg	neg		+	+	+
Faecalicatena torques	Firmicutes	Moderate
Faecalicoccus pleomorphus	Firmicutes	Minor	+	minor(+)	trace(+)		minor(+)					Major(+)			trace(+)				neg			minor(+)		+
Faecalimonas umbilicata	Firmicutes	Rare	+																neg	neg				+
Faecalitalea cylindroides	Firmicutes	Widespread	+	+	+	+	+					Major(+)				d			neg		+		neg
Fannyhessea vaginae	Actinobacteria	Minor	+									+							neg
Fastidiosipila sanguinis	Firmicutes	Rare	+		minor(+)		minor(+)									neg			neg
Fenollaria massiliensis	Firmicutes	Minor	neg																+
Fenollaria timonensis	Firmicutes	Rare	neg
Fermentimonas caenicola	Bacteroidetes	Rare	neg		+	+			trace(+)										neg			+	trace(+)
Ferrimonas balearica	Proteobacteria	Rare	neg
Fibrobacter succinogenes	Fibrobacteres	Unlikely	neg		+										+							neg	neg
Fictibacillus arsenicus	Firmicutes	Unlikely	+													neg			neg					neg
Filifactor alocis	Firmicutes	Minor	neg	neg	+		+					neg			neg	neg			neg				+
Filifactor villosus	Firmicutes	Unlikely	+	+	+	neg	Major(+)	+		+		trace(+)			trace(+)						neg
Finegoldia magna	Firmicutes	Widespread	+		+											neg			neg		+
Flaviflexus massiliensis	Actinobacteria	Rare	+
Flavobacterium banpakuense	Bacteroidetes	Unlikely	neg																+	yellow
Flavobacterium caeni	Bacteroidetes	Non	neg																neg	orange
Flavobacterium cheniae	Bacteroidetes	Rare	neg																+	yellow				w(+)
Flavobacterium daejeonense	Bacteroidetes	Unlikely	neg																neg	yellow
Flavobacterium lindanitolerans	Bacteroidetes	Rare	neg													neg			neg	cream, yellow				neg
Flavobacterium oncorhynchi	Bacteroidetes	Unlikely	neg																neg	yellow				neg
Flavobacterium sakaeratica	Bacteroidetes	Rare	neg
Flavonifractor plautii	Firmicutes	Widespread	vr													neg			d(neg)					d(+)
Flexispira rappini	Proteobacteria	Rare	neg
Flintibacter butyricus	Firmicutes	Rare	neg		+		+					+							neg
Fournierella massiliensis	Firmicutes	Moderate	neg		Major(+)	minor(+)	minor(+)	minor(+)											neg
Francisella tularensis	Proteobacteria	Non	neg																neg					+
Franconibacter pulveris	Proteobacteria	Rare	neg													neg			neg	yellow				neg
Fredinandcohnia humi	Firmicutes	Non	+													neg								neg
Fretibacterium fastidiosum	Synergistetes	Rare	neg		Major(+)	+														yellow				+
Fructilactobacillus florum	Firmicutes	Unlikely	+		+							+						+
Fructilactobacillus fructivorans	Firmicutes	Unlikely	+									+							neg		+			neg
Fructilactobacillus sanfranciscensis	Firmicutes	Rare	+		+							+						+	neg			+		neg
Fucophilus fucoidanolyticus	Verrucomicrobia	Rare	neg
Fundidesulfovibrio putealis	Proteobacteria	Rare	neg																					+
Furfurilactobacillus rossiae	Firmicutes	Unlikely	+									+									+	+
Fusicatenibacter saccharivorans	Firmicutes	Moderate	+	+	+							+			+				neg		neg			neg
Fusobacterium canifelinum	Fusobacteria	Rare	neg		+	+	+												+
Fusobacterium gonidiaformans	Fusobacteria	Minor	neg																+
Fusobacterium massiliense	Fusobacteria	Rare	neg																+
Fusobacterium mortiferum	Fusobacteria	Moderate	neg		+	minor(+)			minor(+)										neg				+
Fusobacterium naviforme	Fusobacteria	Rare	neg
Fusobacterium necrogenes	Fusobacteria	Rare	neg
Fusobacterium necrophorum	Fusobacteria	Minor	neg																+
Fusobacterium necrophorum subsp. funduliforme	Fusobacteria	Rare	neg			+	Major(+)												+					neg
Fusobacterium nucleatum	Fusobacteria	Minor	neg													neg			+
Fusobacterium nucleatum subsp. animalis	Fusobacteria	Rare	neg	minor(+)	+	minor(+)	Major(+)								minor(+)	neg			+					w(+)
Fusobacterium nucleatum subsp. nucleatum	Fusobacteria	Minor	neg		+		+									neg			+					+
Fusobacterium nucleatum subsp. polymorphum	Fusobacteria	Rare	neg		+		+									neg			+					+
Fusobacterium nucleatum subsp. vincentii	Fusobacteria	Rare	neg		+		+									neg			+					+
Fusobacterium perfoetens	Fusobacteria	Rare	neg		+	trace(+)	+					+				neg			neg		+	+		+
Fusobacterium periodonticum	Fusobacteria	Minor	neg		Major(+)	+	+	neg		neg		+			minor(+)	neg			+					+
Fusobacterium pseudoperiodonticum	Fusobacteria	Unlikely	neg																+	gray-brown
Fusobacterium russii	Fusobacteria	Minor	neg																+
Fusobacterium ulcerans	Fusobacteria	Rare	neg		+	+	Major(+)					+			+				neg					neg
Fusobacterium varium	Fusobacteria	Moderate	neg																+					+
Gabonia massiliensis	Bacteroidetes	Rare	neg																neg
Gabonibacter massiliensis	Bacteroidetes	Minor	neg																+
Gabonibacter timonensis	Bacteroidetes	Rare	+
Gallibacterium anatis	Proteobacteria	Rare	neg													neg			neg	neg				neg
Gardnerella leopoldii	Actinobacteria	Unlikely	neg
Gardnerella vaginalis	Actinobacteria	Minor	neg		Major(+)											neg			neg
Gemella asaccharolytica	Firmicutes	Rare	vr		+							minor(+)				neg				neg
Gemella haemolysans	Firmicutes	Minor	+													neg			neg
Gemella morbillorum	Firmicutes	Minor	+	minor(+)	+							Major(+)		trace(+)	trace(+)	neg		trace	neg					neg
Gemella sanguinis	Firmicutes	Minor	+													+			neg	neg
Gemmatimonas groenlandica	Gemmatimonadetes	Non	neg																	pinkish-red
Gemmiger formicilis	Firmicutes	Moderate	neg	+	trace(+)		Major(+)					+		+	trace(+)				neg					neg
Gemmiger variabile	Firmicutes	Moderate
Geobacillus stearothermophilus	Firmicutes	Unlikely	+													neg			neg					neg
Geobacillus vulcani	Firmicutes	Unlikely	+													neg			neg
Geodermatophilus obscurus	Actinobacteria	Non	+
Georgenia muralis	Actinobacteria	Rare	+																neg	yellow				neg
Georgenia satyanarayanai	Actinobacteria	Unlikely	+
Geosporobacter ferrireducens	Firmicutes	Unlikely	neg
Gleimia europaea	Actinobacteria	Rare	+												+
Globicatella sulfidifaciens	Firmicutes	Rare	vr													neg								+
Glutamicibacter arilaitensis	Actinobacteria	Unlikely	+
Glutamicibacter protophormiae	Actinobacteria	Rare	+
Gorbachella massiliensis	Firmicutes	Rare	neg
Gordonia alkanivorans	Actinobacteria	Rare	+													neg			neg	orange-red				+
Gordonia rubripertincta	Actinobacteria	Unlikely	+													neg			neg					neg
Gordonia terrae	Actinobacteria	Rare	+													+			neg	+				neg
Gordonibacter massiliensis	Actinobacteria	Rare	+
Gordonibacter pamelaeae	Actinobacteria	Moderate	+																neg
Gordonibacter urolithinfaciens	Actinobacteria	Minor	+																neg
Gorillibacterium timonense	Firmicutes	Rare	neg
Gottschalkia acidurici	Firmicutes	Unlikely	+	+	+		neg														+	+	neg
Gracilibacillus dipsosauri	Firmicutes	Rare	+
Gracilibacillus massiliensis	Firmicutes	Rare	+																neg
Gracilibacillus phocaeensis	Firmicutes	Rare	+
Gracilibacillus thailandensis	Firmicutes	Non	+													neg			neg					neg
Gracilibacillus timonensis	Firmicutes	Rare	+
Granulicatella adiacens	Firmicutes	Minor	+									Major(+)				neg			neg
Granulicatella elegans	Firmicutes	Minor	+													neg			neg
Granulicatella para-adiacens	Firmicutes	Rare	+													neg
Grimontia hollisae	Proteobacteria	Rare	neg													neg			+					neg
Gulosibacter bifidus	Actinobacteria	Unlikely	+
Haemophilus ducreyi	Proteobacteria	Rare	neg																neg
Haemophilus haemolyticus	Proteobacteria	Minor	neg		+							+			+				+					+
Haemophilus influenzae	Proteobacteria	Minor	neg													neg			vr					neg
Haemophilus parahaemolyticus	Proteobacteria	Minor	neg																neg					+
Haemophilus parainfluenzae	Proteobacteria	Widespread	neg													neg			neg					+
Haemophilus paraphrohaemolyticus	Proteobacteria	Rare	neg																d					+
Haemophilus pittmaniae	Proteobacteria	Minor	neg																neg
Haemophilus quentini	Proteobacteria	Rare	neg																neg
Haemophilus sputorum	Proteobacteria	Minor	neg																neg					neg
Hafnia alvei	Proteobacteria	Minor	neg												+	+			neg					neg
Hafnia paralvei	Proteobacteria	Rare	neg													d(+)			neg	neg				neg
Hahella ganghwensis	Proteobacteria	Rare	neg													neg			neg	light brown				neg
Halanaerobaculum tunisiense	Firmicutes	Unlikely	neg		+		+					+										+	+
Halobacillus dabanensis	Firmicutes	Unlikely	+																	orange
Halobacillus ihumii	Firmicutes	Rare	+
Halobacillus karajensis	Firmicutes	Non	+													neg			neg	white				neg
Halobacillus massiliensis	Firmicutes	Unlikely	+
Halobacillus salinus	Firmicutes	Rare	+																	pale orange-yellow
Halobacillus trueperi	Firmicutes	Unlikely	+													neg				orange
Halobacteroides halobius	Firmicutes	Unlikely	neg		+													+	neg			+	+	neg
Haloferax alexandrinus	Euryarchaeota	Unlikely	neg													neg			+					+
Haloferax massiliensis	Euryarchaeota	Rare	neg
Haloimpatiens massiliensis	Firmicutes	Rare	+
Halomonas massiliensis	Proteobacteria	Rare	neg
Halomonas muralis	Proteobacteria	Non	neg																neg
Halomonas salina	Proteobacteria	Non	neg													neg				cream				vr
Halomonas utahensis	Proteobacteria	Unlikely	neg																neg	reddish-brown				neg
Halopseudomonas bauzanensis	Proteobacteria	Unlikely	neg																neg					neg
Halopseudomonas pelagia	Proteobacteria	Unlikely	neg													neg			neg					neg
Haploplasma axanthum	Tenericutes	Unlikely	neg																	neg
Harryflintia acetispora	Firmicutes	Rare	neg		Major(+)													+		ivory
Hathewaya histolytica	Firmicutes	Rare	+
Hathewaya limosa	Firmicutes	Rare	+		+	minor(+)	+	minor(+)		minor(+)		minor(+)			trace(+)	neg	minor	minor	neg		+		neg	+
Hathewaya massiliensis	Firmicutes	Rare	+
Helcobacillus massiliensis	Actinobacteria	Rare	+
Helcococcus sueciensis	Firmicutes	Rare	+		+							+							neg
Helicobacter bilis	Proteobacteria	Unlikely	neg																					+
Helicobacter canadensis	Proteobacteria	Unlikely	neg													neg				neg
Helicobacter canis	Proteobacteria	Unlikely	neg																	neg				neg
Helicobacter cinaedi	Proteobacteria	Rare	neg													neg			neg	neg				neg
Helicobacter felis	Proteobacteria	Non	neg																neg					neg
Helicobacter fennelliae	Proteobacteria	Rare	neg													neg				neg				neg
Helicobacter heilmannii	Proteobacteria	Non	neg
Helicobacter macacae	Proteobacteria	Unlikely	neg
Helicobacter pametensis	Proteobacteria	Rare	neg																					neg
Helicobacter pullorum	Proteobacteria	Minor	neg													neg				neg				+
Helicobacter pylori	Proteobacteria	Non	neg													neg				neg				neg
Helicobacter rodentium	Proteobacteria	Rare	neg																	neg
Helicobacter winghamensis	Proteobacteria	Rare	neg
Heliomicrobium modesticaldum	Firmicutes	Unlikely	neg
Herbaspirillum autotrophicum	Proteobacteria	Unlikely	neg																neg					neg
Herbaspirillum huttiense	Proteobacteria	Rare	neg																neg					neg
Herbinix hemicellulosilytica	Firmicutes	Unlikely	+		+	minor(+)												+	neg
Herbinix luporum	Firmicutes	Unlikely	+		+		+											+	neg				+
Herminiimonas contaminans	Proteobacteria	Unlikely	neg
Hespellia porcina	Firmicutes	Rare	+	+	+	+	neg					+							neg				+
Hespellia stercorisuis	Firmicutes	Rare	+	+	+	+	neg					+							neg				+
Heyndrickxia oleronia	Firmicutes	Unlikely	neg																neg					neg
Heyndrickxia sporothermodurans	Firmicutes	Unlikely	+													vr			neg					neg
Histophilus somni	Proteobacteria	Rare	neg													neg			d(+)	yellow
Holdemanella biformis	Firmicutes	Moderate	+		+	+	+					+
Holdemania filiformis	Firmicutes	Moderate	+	neg	+							+			+				neg
Holdemania massiliensis	Firmicutes	Minor	+																neg	+
Holophaga foetida	Acidobacteria	Non	neg
Howardella ureilytica	Firmicutes	Rare	+
Hugonella massiliensis	Actinobacteria	Rare	+																neg
Humisphaera borealis	Planctomycetes	Unlikely	neg																	pink
Hungatella effluvii	Firmicutes	Minor	+													neg			neg					neg
Hungatella hathewayi	Firmicutes	Widespread	+		+											neg		+	neg			+	+
Hungatella saccharolyticum	Firmicutes	Rare
Hungatella xylanolytica	Firmicutes	Rare	neg		+													+	neg			+	+	+
Hydrogenibacillus schlegelii	Firmicutes	Unlikely	vr													neg			neg
Hydrogenoanaerobacterium saccharovorans	Firmicutes	Rare	neg		+													+	neg			+	+
Hydrogenophaga pseudoflava	Proteobacteria	Unlikely	neg																neg	yellow
Hydrogenovibrio crunogenus	Proteobacteria	Unlikely	neg
Hymenobacter rigui	Bacteroidetes	Rare	neg													neg			neg	pinkish-red				neg
Hymenobacter russus	Bacteroidetes	Unlikely	neg																neg	red
Hyphomicrobium facile	Proteobacteria	Rare	neg																	brown
Ihubacter massiliensis	Firmicutes	Rare	neg
Ihuprevotella massiliensis	Bacteroidetes	Rare	neg
Ileibacterium valens	Firmicutes	Rare	+																neg
Inediibacterium massiliense	Firmicutes	Rare	+																+
Intestinibacillus massiliensis	Firmicutes	Rare	neg																	neg
Intestinibacter bartlettii	Firmicutes	Widespread	+		+			+		+		minor(+)							neg
Intestinibaculum porci	Firmicutes	Unlikely	+		minor(+)							+							neg
Intestinimonas butyriciproducens	Firmicutes	Moderate	+		+		Major(+)	+	minor(+)	minor(+)		minor(+)						+
Intestinimonas gabonensis	Firmicutes	Rare	neg
Intestinimonas massiliensis	Firmicutes	Moderate	neg																neg
Intestinimonas timonensis	Firmicutes	Rare	neg
Isoptericola variabilis	Actinobacteria	Rare	+																	yellow-white
Janibacter anophelis	Actinobacteria	Rare	+
Janibacter hoylei	Actinobacteria	Non	+													neg			neg					neg
Janibacter limosus	Actinobacteria	Unlikely	+													neg			neg					+
Janibacter terrae	Actinobacteria	Rare	+													neg			neg					+
Jeotgalibaca arthritidis	Firmicutes	Unlikely	+													neg
Jeotgalibaca porci	Firmicutes	Unlikely	+													neg
Jeotgalicoccus halotolerans	Firmicutes	Rare	+																	light yellow
Johnsonella ignava	Firmicutes	Rare	neg		+		trace(+)	trace(+)		+		trace(+)			trace(+)				neg
Jonquetella anthropi	Synergistetes	Rare	neg		+	+		trace(+)		+		neg			neg									vr
Kalamiella piersonii	Proteobacteria	Unlikely	neg
Kallipyga gabonensis	Firmicutes	Rare	+
Kallipyga massiliensis	Firmicutes	Rare	+																neg
Kandleria vitulina	Firmicutes	Rare	+		minor(+)							Major(+)							neg
Kerstersia gyiorum	Proteobacteria	Rare	neg																					neg
Khelaifiella massiliensis	Firmicutes	Rare	+
Kineothrix alysoides	Firmicutes	Rare	neg	+	+		+												neg
Kingella denitrificans	Proteobacteria	Unlikely	neg																neg					neg
Kingella kingae	Proteobacteria	Rare	neg																neg	neg				neg
Kingella oralis	Proteobacteria	Unlikely	neg																neg					+
Kiritimatiella glycovorans	Kiritimatiellaeota	Unlikely	neg		+							trace(+)						+
Klebsiella aerogenes	Proteobacteria	Moderate	neg													+			neg					neg
Klebsiella grimontii	Proteobacteria	Minor	neg	+								+				+		+	+			+	+	neg
Klebsiella michiganensis	Proteobacteria	Minor	neg													+			+					neg
Klebsiella oxytoca	Proteobacteria	Moderate	neg													+			+					neg
Klebsiella pneumoniae	Proteobacteria	Widespread	neg													+			neg					neg
Klebsiella pneumoniae subsp. ozaenae	Proteobacteria	Rare	neg	+								+				neg		+	neg					neg
Klebsiella pneumoniae subsp. rhinoscleromatis	Proteobacteria	Rare	neg	minor(+)	minor(+)							minor(+)				neg		+	neg					neg
Klebsiella quasipneumoniae subsp. quasipneumoniae	Proteobacteria	Minor	neg													+			neg
Klebsiella quasivariicola	Proteobacteria	Minor
Klebsiella variicola	Proteobacteria	Minor	neg													+			neg	yellow				neg
Kluyvera ascorbata	Proteobacteria	Minor	neg													neg			+	neg				neg
Kluyvera cryocrescens	Proteobacteria	Rare	neg													neg			+	neg				neg
Kluyvera georgiana	Proteobacteria	Rare	neg													neg			+	neg				neg
Kluyvera intermedia	Proteobacteria	Rare	neg													+			neg	neg
Kocuria carniphila	Actinobacteria	Unlikely	+													neg				yellow
Kocuria marina	Actinobacteria	Rare	+													neg			neg					neg
Kocuria palustris	Actinobacteria	Unlikely	+													vr			neg	pale yellow				w(+)
Kocuria polaris	Actinobacteria	Unlikely	+													neg			neg	orange
Kocuria rhizophila	Actinobacteria	Unlikely	+																neg	yellow				w(+)
Kocuria rosea	Actinobacteria	Unlikely	+													neg			neg					neg
Kocuria salsicia	Actinobacteria	Unlikely	+																neg	lemon yellow
Kocuria varians	Actinobacteria	Rare	+													neg			neg	yellow				neg
Kosakonia cowanii	Proteobacteria	Minor	neg													+			neg	yellow (variable)
Krasilnikoviella flava	Actinobacteria	Rare	+																					neg
Kurthia gibsonii	Firmicutes	Rare	+													neg			neg					neg
Kurthia massiliensis	Firmicutes	Rare	+
Kurthia senegalensis	Firmicutes	Rare	+
Kurthia sp. Dielmo	Firmicutes	Rare	+
Kurthia zopfii	Firmicutes	Rare	+													neg								d(+)
Kushneria sinocarnis	Firmicutes	Unlikely	neg													neg			neg					neg
Kytococcus schroeteri	Actinobacteria	Rare	+													neg				yellow
Kytococcus sedentarius	Actinobacteria	Rare	+													neg			neg					neg
Labilithrix luteola	Proteobacteria	Non	neg																	light yellow
Lachnoanaerobaculum orale	Firmicutes	Rare	+		+		Major(+)					+							+		+			+
Lachnoanaerobaculum saburreum	Firmicutes	Rare	+		+		Major(+)					+							+		+			+
Lachnoanaerobaculum umeaense	Firmicutes	Rare	+		+		+												neg		+			+
Lachnobacterium bovis	Firmicutes	Rare	+		minor(+)		minor(+)					Major(+)							neg
Lachnoclostridium bouchesdurhonense	Firmicutes	Rare	neg
Lachnoclostridium edouardi	Firmicutes	Minor	+
Lachnoclostridium massiliosenegalense	Firmicutes	Rare	+
Lachnoclostridium pacaense	Firmicutes	Rare	vr																neg
Lachnoclostridium phocaeense	Firmicutes	Rare	+
Lachnoclostridium phytofermentans	Firmicutes	Minor	neg	minor(+)	+							minor(+)						+				+	+	neg
Lachnoclostridium touaregense	Firmicutes	Rare	+
Lachnospira eligens	Firmicutes	Widespread	+	Major(+)	+		neg	neg				minor(+)		neg	trace(+)			+	neg		neg		neg	neg
Lachnospira multipara	Firmicutes	Rare	+	+	+							+				+		+	neg			+	minor(+)	neg
Lachnospira pectinoschiza	Firmicutes	Minor	+	+	+													neg	neg					neg
Lachnospira rogosae	Firmicutes	Moderate
Lacrimispora aerotolerans	Firmicutes	Rare	neg	+	+							+				neg		+	neg			+	Major(+)	neg
Lacrimispora amygdalina	Firmicutes	Rare	+		+	minor(+)	minor(+)		minor(+)									+	+			+	+
Lacrimispora celerecrescens	Firmicutes	Rare	+	+	+		+	+		+		+			+	neg		+	+			+	+
Lacrimispora indolis	Firmicutes	Minor	neg	+	+		+									d		+	+		+		+	+
Lacrimispora saccharolytica	Firmicutes	Moderate	neg		+							trace(+)		trace(+)		+		minor	+		+	+	+
Lacrimispora sphenoides	Firmicutes	Minor	+	minor(+)	Major(+)		trace(+)											+	+			+	+	+
Lacticaseibacillus casei	Firmicutes	Rare	+									+				+			neg					neg
Lacticaseibacillus paracasei	Firmicutes	Minor	+									+				+			neg					neg
Lacticaseibacillus paracasei subsp. tolerans	Firmicutes	Unlikely	+									+
Lacticaseibacillus paragasseri	Firmicutes	Unlikely	+									+							neg					neg
Lacticaseibacillus rhamnosus	Firmicutes	Moderate	+													+			neg					neg
Lacticaseibacillus saniviri	Firmicutes	Unlikely	+									+							neg					neg
Lacticaseibacillus sharpeae	Firmicutes	Unlikely	+																neg					neg
Lacticaseibacillus zeae	Firmicutes	Unlikely	+									Major(+)							neg					neg
Lacticigenium naphtae	Firmicutes	Non	vr									Major(+)												neg
Lactiplantibacillus paraplantarum	Firmicutes	Rare	+									+							neg					neg
Lactiplantibacillus pentosus	Firmicutes	Rare	+									+				+			neg					neg
Lactiplantibacillus plantarum	Firmicutes	Moderate	+									+							neg					neg
Lactiplantibacillus xiangfangensis	Firmicutes	Rare	+
Lactobacillus acidophilus	Firmicutes	Widespread	+									+				neg			neg					neg
Lactobacillus amylolyticus	Firmicutes	Unlikely	+									+												neg
Lactobacillus amylovorus	Firmicutes	Minor	+									+				neg			neg					neg
Lactobacillus crispatus	Firmicutes	Moderate	+									+				neg			neg					neg
Lactobacillus delbrueckii subsp. bulgaricus	Firmicutes	Rare	+									+							neg					neg
Lactobacillus delbrueckii subsp. delbrueckii	Firmicutes	Minor	+									+				neg			neg					neg
Lactobacillus delbrueckii subsp. lactis	Firmicutes	Unlikely	+									+							neg					neg
Lactobacillus equicursoris	Firmicutes	Rare	+									+
Lactobacillus gasseri	Firmicutes	Moderate	+									+				neg			neg					neg
Lactobacillus gigeriorum	Firmicutes	Unlikely	+									+							neg
Lactobacillus hamsteri	Firmicutes	Rare	+		minor(+)							+			minor(+)
Lactobacillus helveticus	Firmicutes	Rare	+									+				neg			neg					neg
Lactobacillus hominis	Firmicutes	Unlikely	+									+				+			neg
Lactobacillus iners	Firmicutes	Rare	+													neg			neg					neg
Lactobacillus intestinalis	Firmicutes	Unlikely	+									+
Lactobacillus jensenii	Firmicutes	Unlikely	+									+				neg			neg					neg
Lactobacillus johnsonii	Firmicutes	Minor	+									+				+			neg					neg
Lactobacillus kalixensis	Firmicutes	Minor	+									+							neg					neg
Lactobacillus kefiranofaciens	Firmicutes	Rare	+									+
Lactobacillus leichmannii	Firmicutes	Rare	+																neg					neg
Lactobacillus pasteurii	Firmicutes	Unlikely	+									+				neg			neg
Lactobacillus psittaci	Firmicutes	Unlikely	+													neg
Lactobacillus rogosae	Firmicutes	Rare	+	minor(+)	+							Major(+)			minor(+)			+	neg		minor			neg
Lactobacillus timonensis	Firmicutes	Unlikely	+																neg					neg
Lactobacillus ultunensis	Firmicutes	Minor	+									+							neg					neg
Lactococcus cremoris	Firmicutes	Rare	+													+
Lactococcus garvieae	Firmicutes	Minor	+													+			neg	neg
Lactococcus lactis subsp. lactis	Firmicutes	Widespread	+													+			neg	neg	+
Lactococcus petauri	Firmicutes	Rare	+									+								cream or orange
Lactococcus plantarum	Firmicutes	Rare	+													+				neg
Lactococcus raffinolactis	Firmicutes	Minor	+													+				neg
Lactonifactor longoviformis	Firmicutes	Minor	neg																neg
Lacunisphaera limnophila	Verrucomicrobia	Unlikely	neg
Lagierella massiliensis	Firmicutes	Rare	+
Lancefieldella parvula	Actinobacteria	Minor	+	minor(+)	+							Major(+)			trace(+)				neg		neg		neg
Lancefieldella rimae	Actinobacteria	Minor	+	minor(+)	+							Major(+)			trace(+)				neg		+		neg
Lapidilactobacillus dextrinicus	Firmicutes	Non	+									+				neg
Laribacter hongkongensis	Proteobacteria	Rare	neg													neg			neg					neg
Lascolabacillus massiliensis	Bacteroidetes	Rare	neg
Latilactobacillus curvatus	Firmicutes	Minor	+									Major(+)				+			neg					neg
Latilactobacillus sakei	Firmicutes	Minor	+									Major(+)				+			neg	neg	+			neg
Latilactobacillus sakei subsp. carnosus	Firmicutes	Rare	+									+				d(+)					+
Lautropia mirabilis	Proteobacteria	Minor	neg													neg			neg	neg				neg
Lawsonella clevelandensis	Actinobacteria	Rare	vr
Lawsonia intracellularis	Proteobacteria	Unlikely	neg																	neg
Lawsonibacter asaccharolyticus	Firmicutes	Moderate	+		+		+												neg	neg				neg
Leclercia adecarboxylata	Proteobacteria	Rare	neg													neg			+	yellow (atypical)				neg
Lederbergia galactosidilyticus	Firmicutes	Rare	+													neg			neg					neg
Lederbergia lentus	Firmicutes	Unlikely	+													neg			neg					neg
Legionella bozemanae	Proteobacteria	Non	neg																	fluorescent
Legionella pneumophila	Proteobacteria	Non	neg
Lelliottia amnigena	Proteobacteria	Rare	neg													+			neg					neg
Lelliottia nimipressuralis	Proteobacteria	Rare	neg													+			neg			+	+
Leminorella grimontii	Proteobacteria	Rare	neg													neg			neg	neg				+
Leminorella richardii	Proteobacteria	Rare	neg													neg			neg	neg				+
Lentibacillus massiliensis	Firmicutes	Rare	+
Lentibacillus timonensis	Firmicutes	Rare	+
Lentilactobacillus buchneri subsp. buchneri	Firmicutes	Minor	+									Major(+)				+			neg		+			neg
Lentilactobacillus diolivorans	Firmicutes	Unlikely	+			+						+
Lentilactobacillus farraginis	Firmicutes	Unlikely	+		+							+						+				+
Lentilactobacillus hilgardii	Firmicutes	Rare	+		+							+									+	+
Lentilactobacillus kefiri	Firmicutes	Non	+		+							Major(+)						+	neg		+			neg
Lentilactobacillus kisonensis	Firmicutes	Unlikely	+									+									+
Lentilactobacillus otakiensis	Firmicutes	Unlikely	+									Major(+)									+
Lentilactobacillus parabuchneri	Firmicutes	Rare	+													+			neg					neg
Lentilactobacillus parafarraginis	Firmicutes	Unlikely	+		+							+						+				+
Lentilactobacillus senioris	Firmicutes	Unlikely	+									+							neg		+			neg
Leptospira interrogans	Spirochaetes	Non	neg
Leptotrichia amnionii	Fusobacteria	Rare	neg		minor(+)							+			minor(+)				neg					neg
Leptotrichia buccalis	Fusobacteria	Rare	neg		minor(+)							+			+	neg			neg					neg
Leptotrichia hofstadii	Fusobacteria	Rare	neg																neg
Leptotrichia hongkongensis	Fusobacteria	Rare	vr
Leptotrichia massiliensis	Fusobacteria	Rare	+
Leptotrichia shahii	Fusobacteria	Rare	neg																neg
Leptotrichia wadei	Fusobacteria	Rare	neg																neg
Leucobacter aridicollis	Actinobacteria	Unlikely	+																neg
Leuconostoc carnosum	Firmicutes	Unlikely	+									+				neg			neg
Leuconostoc citreum	Firmicutes	Minor	+													+				lemon yellow
Leuconostoc gelidum	Firmicutes	Rare	+									+				neg						+
Leuconostoc gelidum subsp. gasicomitatum	Firmicutes	Non	+									+
Leuconostoc holzapfelii	Firmicutes	Rare	+									+
Leuconostoc inhae	Firmicutes	Unlikely	+									+
Leuconostoc kimchii	Firmicutes	Rare	+									+
Leuconostoc lactis	Firmicutes	Minor	+									Major(+)				neg			neg			+
Leuconostoc mesenteroides subsp. cremoris	Firmicutes	Rare	+		+							+				neg		+	neg			+
Leuconostoc mesenteroides subsp. mesenteroides	Firmicutes	Minor	+													+			neg
Leuconostoc pseudomesenteroides	Firmicutes	Unlikely	+
Levilactobacillus brevis	Firmicutes	Minor	+													+			neg		+			neg
Levilactobacillus brevis subsp. gravesensis	Firmicutes	Unlikely	+									Major(+)							neg		+			neg
Levilactobacillus namurensis	Firmicutes	Unlikely	+									+									+
Levilactobacillus parabrevis	Firmicutes	Unlikely	+		+							+						+			+
Levyella massiliensis	Firmicutes	Rare	+																+
Ligilactobacillus acidipiscis	Firmicutes	Unlikely	+									Major(+)				+				neg
Ligilactobacillus agilis	Firmicutes	Rare	+									+				+			neg					neg
Ligilactobacillus animalis	Firmicutes	Minor	+													+			neg					neg
Ligilactobacillus ceti	Firmicutes	Unlikely	+									+
Ligilactobacillus equi	Firmicutes	Unlikely	+									+
Ligilactobacillus murinus	Firmicutes	Rare	+									+							neg					neg
Ligilactobacillus pobuzihii	Firmicutes	Unlikely	+									+
Ligilactobacillus ruminis	Firmicutes	Widespread	+																neg					neg
Ligilactobacillus salivarius	Firmicutes	Widespread	+													+			neg					neg
Limnobacter thiooxidans	Proteobacteria	Unlikely	neg
Limnochorda pilosa	Firmicutes	Unlikely	neg
Limosilactobacillus antri	Firmicutes	Rare	+									Major(+)				+			neg					neg
Limosilactobacillus caccae	Firmicutes	Rare	+
Limosilactobacillus coleohominis	Firmicutes	Unlikely	+									Major(+)				neg			neg	neg	neg			neg
Limosilactobacillus fermentum	Firmicutes	Widespread	+													vr			neg					neg
Limosilactobacillus frumenti	Firmicutes	Non	+									+									+
Limosilactobacillus gastricus	Firmicutes	Unlikely	+													neg			neg					neg
Limosilactobacillus ingluviei	Firmicutes	Non	+		+	trace(+)						+			trace(+)									neg
Limosilactobacillus mucosae	Firmicutes	Rare	+									Major(+)				neg			neg					neg
Limosilactobacillus oris	Firmicutes	Minor	+																neg					neg
Limosilactobacillus reuteri	Firmicutes	Minor	+		+							+				vr		+	neg	neg		+		neg
Limosilactobacillus vaginalis	Firmicutes	Rare	+													neg			neg					neg
Limosilactobacillus walteri	Firmicutes	Rare	+
Liquorilactobacillus mali	Firmicutes	Unlikely	+		neg	neg	neg	neg	neg						neg				neg					neg
Liquorilactobacillus satsumensis	Firmicutes	Non	+									+
Liquorilactobacillus vini	Firmicutes	Unlikely	+									+									neg
Listeria floridensis	Firmicutes	Rare	+													neg
Listeria grayi	Firmicutes	Rare	+													+			neg					neg
Listeria innocua	Firmicutes	Rare	+													+			neg
Listeria ivanovii	Firmicutes	Rare	+													+			neg					neg
Listeria marthii	Firmicutes	Rare	+									+				+			neg	blue-green iridescence				+
Listeria monocytogenes	Firmicutes	Rare	+													+			neg
Listeria seeligeri	Firmicutes	Rare	+													+								neg
Listeria welshimeri	Firmicutes	Rare	+													+			neg					neg
Litchfieldia alkalitelluris	Firmicutes	Rare	+
Loigolactobacillus bifermentans	Firmicutes	Unlikely	+		+	trace(+)												+	neg			+	+	neg
Loigolactobacillus coryniformis	Firmicutes	Minor	+									Major(+)							neg					neg
Loigolactobacillus coryniformis subsp. torquens	Firmicutes	Unlikely	+									+							neg					neg
Longicatena caecimuris	Firmicutes	Rare	+									+
Lutispora thermophila	Firmicutes	Unlikely	neg		+	+		+		+									+					+
Luxibacter massiliensis	Firmicutes	Rare	+
Lysinibacillus boronitolerans	Firmicutes	Rare	+													+			neg					neg
Lysinibacillus fusiformis	Firmicutes	Rare	vr													neg			+					neg
Lysinibacillus macroides	Firmicutes	Unlikely	vr													+			neg					neg
Lysinibacillus meyeri	Firmicutes	Unlikely	+													+			neg					neg
Lysinibacillus sphaericus	Firmicutes	Rare	+													neg			neg	neg				neg
Lysinibacillus varians	Firmicutes	Rare	+													neg			neg					neg
Lysinibacillus xylanilyticus	Firmicutes	Rare	+													neg			neg					neg
Lysobacter soli	Proteobacteria	Rare	neg																neg	yellow
Macellibacteroides fermentans	Bacteroidetes	Rare	+		+		+	+				+
Macrococcus caseolyticus	Firmicutes	Unlikely	+													+
Mageeibacillus indolicus	Firmicutes	Rare	vr																+
Mahella australiensis	Firmicutes	Unlikely	+	+	+							+						+				+	+
Mailhella massiliensis	Proteobacteria	Rare	neg
Mameliella alba	Proteobacteria	Unlikely	neg													+			neg					neg
Mammaliicoccus fleurettii	Firmicutes	Rare	+													neg				neg
Mammaliicoccus lentus	Firmicutes	Rare	+									+				neg
Mammaliicoccus sciuri	Firmicutes	Rare	+									+				neg
Mammaliicoccus vitulinus	Firmicutes	Unlikely	+													neg				+
Mannheimia granulomatis	Proteobacteria	Rare	neg																neg					neg
Mannheimia haemolytica	Proteobacteria	Rare	neg																neg
Mannheimia succiniciproducens	Proteobacteria	Rare	neg	+	+							minor(+)			Major(+)			minor
Marasmitruncus massiliensis	Firmicutes	Rare	+
Marseilla massiliensis	Bacteroidetes	Rare	neg
Marseillibacter massiliensis	Firmicutes	Rare	neg
Marvinbryantia formatexigens	Firmicutes	Moderate	+		+							+			+				neg
Massilia aurea	Proteobacteria	Unlikely	neg													neg			neg	yellow				neg
Massilia brevitalea	Proteobacteria	Non	neg													neg			neg					neg
Massilia haematophila	Proteobacteria	Rare	neg
Massilia norwichensis	Proteobacteria	Unlikely	neg																neg					neg
Massilia timonae	Proteobacteria	Non	neg																					neg
Massilia varians	Proteobacteria	Unlikely	neg
Massilibacillus massiliensis	Firmicutes	Rare	+
Massilibacterium senegalense	Firmicutes	Rare	neg																neg
Massilicoli timonensis	Firmicutes	Rare	neg																neg
Massiliimalia massiliensis	Firmicutes	Rare	neg																neg
Massiliimalia timonensis	Firmicutes	Minor	+
Massilimicrobiota timonensis	Firmicutes	Moderate	neg																neg
Massilioclostridium coli	Firmicutes	Moderate	neg																neg
Massiliprevotella massiliensis	Bacteroidetes	Rare	neg
Massilistercora timonensis	Firmicutes	Rare	neg																neg	beige
Mediterranea massiliensis	Bacteroidetes	Rare	neg																neg
Mediterraneibacter faecis	Firmicutes	Minor	+		+							+							neg
Mediterraneibacter glycyrrhizinilyticus	Firmicutes	Minor	+		+	+	+								minor(+)				neg				+
Mediterraneibacter massiliensis	Firmicutes	Rare	+
Megalodesulfovibrio gigas	Proteobacteria	Unlikely	neg																					+
Megamonas funiformis	Firmicutes	Minor	neg		+	+						minor(+)			minor(+)				neg
Megamonas hypermegale	Firmicutes	Moderate	neg		+	+						Major(+)							neg
Megamonas rupellensis	Firmicutes	Rare	neg		+	+
Megasphaera cerevisiae	Firmicutes	Rare	neg		minor(+)	minor(+)	+	minor(+)	minor(+)	+									neg			+	+	+
Megasphaera elsdenii	Firmicutes	Moderate	neg		+	+	+	+	+							w			neg	+		+		+
Megasphaera indica	Firmicutes	Rare	neg	minor(+)	+		+	+	+	+					minor(+)	neg			neg			+	+	+
Megasphaera massiliensis	Firmicutes	Rare	neg																neg
Megasphaera micronuciformis	Firmicutes	Minor	neg		+	+	+	trace(+)	minor(+)	+									neg	neg
Megasphaera stantonii	Firmicutes	Rare	neg	+	+	minor(+)	+			+		minor(+)
Meiothermus silvanus	Deinococcus-Thermus	Unlikely	neg																	orange-red
Merdibacter massiliensis	Firmicutes	Rare	neg
Merdimonas faecis	Firmicutes	Rare	+		Major(+)														neg					neg
Mesobacillus jeotgali	Firmicutes	Rare	vr																neg	cream-yellow
Mesobacillus subterraneus	Firmicutes	Rare	neg																	dark yellow-orange				neg
Mesorhizobium australicum	Proteobacteria	Unlikely	neg
Mesorhizobium jarvisii	Proteobacteria	Unlikely	neg
Mesorhizobium loti	Proteobacteria	Rare	neg		+														neg
Mesorhizobium muleiense	Proteobacteria	Unlikely	neg													neg								neg
Mesosutterella multiformis	Proteobacteria	Rare	neg																neg	neg
Metabacillus galliciensis	Firmicutes	Unlikely	+																neg
Metabacillus idriensis	Firmicutes	Rare	+
Metabacillus litoralis	Firmicutes	Rare	vr																neg					neg
Metabacillus niabensis	Firmicutes	Rare	+													neg			neg
Metakosakonia massiliensis	Proteobacteria	Rare	neg																+
Metamycoplasma anseris	Tenericutes	Unlikely	unk
Metaprevotella massiliensis	Bacteroidetes	Rare	neg																	dark
Methanobrevibacter arboriphilus	Euryarchaeota	Rare	+
Methanobrevibacter millerae	Euryarchaeota	Rare	+
Methanobrevibacter oralis	Euryarchaeota	Rare	+
Methanobrevibacter ruminantium	Euryarchaeota	Rare	+
Methanobrevibacter smithii	Euryarchaeota	Moderate	+
Methanococcus voltae	Euryarchaeota	Rare	neg
Methanomassiliicoccus intestinalis	Euryarchaeota	Rare	+
Methanomassiliicoccus luminyensis	Candidatus Thermoplasmatota	Rare	+																				+
Methanomethylophilus alvus	Candidatus Thermoplasmatota	Rare
Methanosphaera stadtmanae	Euryarchaeota	Minor	+
Methylibium petroleiphilum	Proteobacteria	Unlikely	neg
Methylobacterium adhaesivum	Proteobacteria	Unlikely	neg													neg			neg	pink				neg
Methylobacterium brachiatum	Proteobacteria	Unlikely	neg
Methylobacterium jeotgali	Proteobacteria	Non	neg													neg			neg	neg				neg
Methylobacterium mesophilicum	Proteobacteria	Non	neg													neg			neg	pink				neg
Methylobacterium organophilum	Proteobacteria	Unlikely	neg																	light pink
Methylobacterium oryzae	Proteobacteria	Unlikely	neg													neg			neg	pink				neg
Methylobacterium phyllosphaerae	Proteobacteria	Unlikely	neg													neg			neg	pinkish-red				neg
Methylobacterium radiotolerans	Proteobacteria	Non	neg													neg			neg	pinkish-red				+
Methylomusa anaerophila	Firmicutes	Unlikely	neg		+
Methylorubrum aminovorans	Proteobacteria	Rare	neg													neg			neg		neg			neg
Methylorubrum extorquens	Proteobacteria	Non	neg													neg			neg		neg			neg
Methylorubrum populi	Proteobacteria	Unlikely	neg													neg				pinkish-red				neg
Methylorubrum thiocyanatum	Proteobacteria	Unlikely	neg													neg			+	pink				neg
Methylorubrum zatmanii	Proteobacteria	Unlikely	neg													neg			neg	pinkish-red				neg
Methyloversatilis discipulorum	Proteobacteria	Rare	neg
Methyloversatilis universalis	Proteobacteria	Rare	neg																neg
Microbacterium aurum	Actinobacteria	Rare	+													neg				yellow				+
Microbacterium chocolatum	Actinobacteria	Unlikely	+													neg				orange				+
Microbacterium deminutum	Actinobacteria	Unlikely	+																	pale yellow
Microbacterium esteraromaticum	Actinobacteria	Unlikely	+													neg			neg	yellow				+
Microbacterium foliorum	Actinobacteria	Unlikely	+													neg			neg					neg
Microbacterium ginsengisoli	Actinobacteria	Non	+																	yellow
Microbacterium gubbeenense	Actinobacteria	Unlikely	+													neg			neg					neg
Microbacterium hydrocarbonoxydans	Actinobacteria	Unlikely	+													neg				yellow				neg
Microbacterium kitamiense	Actinobacteria	Unlikely	+													neg			neg	orange				neg
Microbacterium lacticum	Actinobacteria	Unlikely	+													neg			neg					neg
Microbacterium liquefaciens	Actinobacteria	Unlikely	+													neg				bright yellow				+
Microbacterium luteolum	Actinobacteria	Non	+													neg			neg	yellow				neg
Microbacterium maritypicum	Actinobacteria	Unlikely	+													neg				light yellow				neg
Microbacterium mitrae	Actinobacteria	Unlikely	+													neg			neg	yellow				neg
Microbacterium natoriense	Actinobacteria	Unlikely	+																	yellow
Microbacterium oleivorans	Actinobacteria	Unlikely	+													neg								neg
Microbacterium oxydans	Actinobacteria	Unlikely	+													neg				yellow				+
Microbacterium paraoxydans	Actinobacteria	Rare	+													neg			neg	yellow				neg
Microbacterium phyllosphaerae	Actinobacteria	Unlikely	+													neg			neg	yellow				neg
Microbacterium saccharophilum	Actinobacteria	Unlikely	+																neg	yellow				neg
Microbacterium schleiferi	Actinobacteria	Unlikely	+													+			neg	yellow				neg
Microbacterium sediminicola	Actinobacteria	Unlikely	+																	pale yellow
Microbacterium testaceum	Actinobacteria	Non	+													neg			neg	reddish-yellow				+
Microbispora rosea	Actinobacteria	Rare	+																	orange-pink
Micrococcus cohnii	Actinobacteria	Unlikely	+																neg					neg
Micrococcus endophyticus	Actinobacteria	Unlikely	+													neg				neg
Micrococcus luteus	Actinobacteria	Minor	+													neg			neg	yellow				neg
Micrococcus lylae	Actinobacteria	Rare	+													d				white
Micrococcus terreus	Actinobacteria	Rare	+													neg			neg	yellow
Microlunatus phosphovorus	Actinobacteria	Unlikely	+
Micromonospora aurantiaca	Actinobacteria	Rare	+													+			neg	brown				neg
Micropruina glycogenica	Actinobacteria	Rare	+
Microvirga aerophila	Proteobacteria	Unlikely	neg																neg	pink
Microvirga massiliensis	Proteobacteria	Rare	neg																neg
Microvirgula aerodenitrificans	Proteobacteria	Unlikely	neg
Millionella massiliensis	Bacteroidetes	Rare	neg
Miniphocaeibacter massiliensis	Firmicutes	Rare	+
Mitsuokella jalaludinii	Firmicutes	Minor	neg		+							+			+	+			neg					neg
Mitsuokella multacida	Firmicutes	Moderate	neg		+							+				+			neg					neg
Mixta calida	Proteobacteria	Rare	neg													+			neg	neg				neg
Mixta intestinalis	Proteobacteria	Rare	neg													+
Mobilibacterium massiliense	Firmicutes	Rare	neg
Mobilibacterium timonense	Firmicutes	Rare	neg
Mobilicoccus massiliensis	Actinobacteria	Rare	+
Mobiluncus curtisii	Actinobacteria	Rare	vr		+										Major(+)	neg			neg		+
Moellerella wisconsensis	Proteobacteria	Rare	neg													neg			neg	neg				neg
Mogibacterium diversum	Firmicutes	Rare	+																neg		neg
Mogibacterium neglectum	Firmicutes	Rare	+																neg
Mogibacterium pumilum	Firmicutes	Rare	+																neg
Mogibacterium timidum	Firmicutes	Rare	+	minor(+)	minor(+)		neg	neg		neg					minor(+)				neg		neg		trace(+)
Mogibacterium vescum	Firmicutes	Unlikely	+																neg	neg	neg
Monoglobus pectinilyticus	Firmicutes	Minor	+	+	+							+							neg			+	+
Moorella glycerini	Firmicutes	Unlikely	+		+															neg
Moraxella catarrhalis	Proteobacteria	Unlikely	neg													neg			neg	neg
Moraxella osloensis	Proteobacteria	Unlikely	neg																neg	neg				neg
Mordavella massiliensis	Firmicutes	Rare	neg
Morganella morganii	Proteobacteria	Minor	neg													neg			+					vr
Moryella indoligenes	Firmicutes	Rare	+		+		+					minor(+)							+
Mucispirillum schaedleri	Deferribacteres	Rare	neg																	neg
Murdochiella asaccharolytica	Firmicutes	Rare	+		+		+					Major(+)			+				+
Murdochiella massiliensis	Firmicutes	Rare	+
Murdochiella vaginalis	Firmicutes	Rare	+																neg
Muribaculum gordoncarteri	Bacteroidetes	Unlikely	neg
Muribaculum intestinale	Bacteroidetes	Minor	neg																neg
Murimonas intestini	Firmicutes	Rare	+		Major(+)														neg
Mycobacterium abscessus	Actinobacteria	Unlikely	vr																	neg
Mycobacterium avium	Actinobacteria	Unlikely	vr
Mycobacterium avium subsp. paratuberculosis	Actinobacteria	Unlikely	vr																	neg
Mycobacterium colombiense	Actinobacteria	Rare	vr																	neg
Mycobacterium florentinum	Actinobacteria	Rare	vr																	neg
Mycobacterium fortuitum	Actinobacteria	Rare	vr																	neg
Mycobacterium gastri	Actinobacteria	Rare	vr																	neg
Mycobacterium gordonae	Actinobacteria	Rare	vr																	yellow
Mycobacterium interjectum	Actinobacteria	Rare	vr
Mycobacterium kansasii	Actinobacteria	Unlikely	vr																	bright yellow
Mycobacterium lentiflavum	Actinobacteria	Rare	vr																	bright yellow
Mycobacterium simiae	Actinobacteria	Rare	vr																	+
Mycobacterium terrae	Actinobacteria	Rare	vr																	neg
Mycobacterium tuberculosis	Actinobacteria	Non	vr																	neg
Mycobacterium tuberculosis variant africanum	Actinobacteria	Non	vr																	neg
Mycobacterium tuberculosis variant bovis	Actinobacteria	Unlikely	+																	neg
Mycobacteroides abscessus subsp. bolletii	Actinobacteria	Unlikely	+																	neg
Mycolicibacterium aubagnense	Actinobacteria	Non	+													+			neg	neg				neg
Mycolicibacterium cosmeticum	Actinobacteria	Unlikely	vr
Mycolicibacterium houstonense	Actinobacteria	Rare	+
Mycolicibacterium mageritense	Actinobacteria	Unlikely	+																	neg
Mycolicibacterium neoaurum	Actinobacteria	Rare	+																	Scotochromogenic
Mycoplasma hominis	Tenericutes	Rare	neg													neg			neg
Mycoplasma muris	Tenericutes	Rare	neg
Mycoplasma pneumoniae	Tenericutes	Rare	neg
Mycoplasmopsis arginini	Tenericutes	Unlikely	neg
Mycoplasmopsis californica	Tenericutes	Unlikely	neg
Myroides odoratimimus	Bacteroidetes	Unlikely	neg																neg	yellow
Myroides odoratus	Bacteroidetes	Unlikely	neg																neg	yellow
Nakamurella multipartita	Actinobacteria	Unlikely	+
Nanosynbacter lyticus	Candidatus Saccharibacteria	Unlikely	+
Natronorubrum bangense	Euryarchaeota	Non	neg																+	red				neg
Nautilia nitratireducens	Proteobacteria	Unlikely	neg																		+
Ndongobacter massiliensis	Firmicutes	Unlikely	neg
Necropsobacter rosorum	Proteobacteria	Rare	neg													neg			neg	neg				neg
Negativibacillus massiliensis	Firmicutes	Minor	neg																neg
Negativicoccus massiliensis	Firmicutes	Rare	neg		+	+						trace(+)
Negativicoccus succinicivorans	Firmicutes	Rare	neg		+	+						trace(+)
Neglecta timonensis	Firmicutes	Rare	+
Neisseria bacilliformis	Proteobacteria	Rare	neg																neg
Neisseria canis	Proteobacteria	Rare	neg																neg	yellow
Neisseria cinerea	Proteobacteria	Minor	neg																neg	variable
Neisseria elongata	Proteobacteria	Minor	neg																neg	w				neg
Neisseria flava	Proteobacteria	Rare	neg																neg		+
Neisseria flavescens	Proteobacteria	Minor	neg																neg	yellow
Neisseria gonorrhoeae	Proteobacteria	Non	neg																neg	neg
Neisseria lactamica	Proteobacteria	Rare	neg																neg	yellow
Neisseria macacae	Proteobacteria	Rare	neg																neg	yellow
Neisseria meningitidis	Proteobacteria	Unlikely	neg																neg	neg
Neisseria mucosa	Proteobacteria	Rare	neg																neg	yellow
Neisseria oralis	Proteobacteria	Rare	neg																neg	yellow				neg
Neisseria perflava	Proteobacteria	Rare	neg																neg	neg
Neisseria polysaccharea	Proteobacteria	Rare	neg
Neisseria shayeganii	Proteobacteria	Rare	neg																neg					neg
Neisseria sicca	Proteobacteria	Rare	neg																neg	yellow (variable)
Neisseria subflava	Proteobacteria	Rare	neg																neg	yellow
Neoactinobaculum massilliense	Actinobacteria	Rare	+
Neobacillus bataviensis	Firmicutes	Rare	+													neg			neg	light brown				neg
Neobacillus fumarioli	Firmicutes	Unlikely	+													+			neg					neg
Neobacillus jeddahensis	Firmicutes	Rare	+																neg
Neobacillus massiliamazoniensis	Firmicutes	Rare	+
Neobacillus niacini	Firmicutes	Rare	+													neg			(d)					neg
Neobacillus pocheonensis	Firmicutes	Unlikely	+													w			neg					neg
Neobacillus soli	Firmicutes	Rare	+													neg			neg					neg
Neobittarella massiliensis	Firmicutes	Moderate	+
Neofamilia massiliensis	Firmicutes	Rare
Nesterenkonia massiliensis	Actinobacteria	Rare	+																neg	dark yellow				neg
Nevskia ramosa	Proteobacteria	Unlikely	neg																neg	neg
Niallia nealsonii	Firmicutes	Rare	+													neg			neg					neg
Niameybacter massiliensis	Firmicutes	Rare	+
Nigerium massiliense	Actinobacteria	Rare	+
Nitriliruptor alkaliphilus	Actinobacteria	Unlikely	+
Nitrosomonas eutropha	Proteobacteria	Rare	neg
Nocardia asteroides	Actinobacteria	Rare	+																	orange-red
Nocardia brevicatena	Actinobacteria	Rare	+																	pink, red, orange
Nocardia cyriacigeorgica	Actinobacteria	Rare	+
Nocardia mangyaensis	Actinobacteria	Unlikely	+																	pale pink				+
Nocardia otitidiscaviarum	Actinobacteria	Rare	+
Nocardioides jensenii	Actinobacteria	Unlikely	+
Nocardioides kribbensis	Actinobacteria	Unlikely	+
Nocardioides massiliensis	Actinobacteria	Unlikely	+																neg
Nosocomiicoccus massiliensis	Firmicutes	Rare	+																neg	+
Noviherbaspirillum massiliense	Proteobacteria	Rare	neg																neg	light brown				neg
Novosphingobium capsulatum	Proteobacteria	Unlikely	neg													neg			neg	yellow				+
Numidum massiliense	Firmicutes	Rare	+																neg
Obesumbacterium proteus	Proteobacteria	Rare	neg													neg			neg
Oceanidesulfovibrio marinus	Proteobacteria	Unlikely	neg		+																			+
Oceanithermus profundus	Deinococcus-Thermus	Unlikely	neg		+	neg
Oceanobacillus caeni	Firmicutes	Rare	+													+			neg					neg
Oceanobacillus iheyensis	Firmicutes	Unlikely	+													neg			neg					neg
Oceanobacillus jeddahense	Firmicutes	Rare	+																neg
Oceanobacillus manasiensis	Firmicutes	Rare	+													neg								neg
Oceanobacillus massiliensis	Firmicutes	Rare	+																neg
Oceanobacillus oncorhynchi	Firmicutes	Non	+																neg
Oceanobacillus picturae	Firmicutes	Unlikely	+													neg				neg				neg
Oceanobacillus senegalensis	Firmicutes	Unlikely	+
Oceanobacillus sojae	Firmicutes	Rare	+													neg			neg					neg
Oceanobacillus timonensis	Firmicutes	Unlikely	+
Ochrobactrum anthropi	Proteobacteria	Unlikely	neg																neg					neg
Ochrobactrum intermedium	Proteobacteria	Unlikely	neg																neg					neg
Odoribacter laneus	Bacteroidetes	Minor	neg		minor(+)			minor(+)		minor(+)					minor(+)				+
Odoribacter massiliensis	Bacteroidetes	Minor
Odoribacter splanchnicus	Bacteroidetes	Widespread	neg		+	+	minor(+)	minor(+)		minor(+)		trace(+)			+				+
Oenococcus oeni	Firmicutes	Unlikely	+		+							+						+	neg		neg	+
Oerskovia turbata	Actinobacteria	Rare	+																	yellow
Okadaella gastrococcus	Firmicutes	Rare	neg
Olegusella massiliensis	Actinobacteria	Rare	+
Oleidesulfovibrio alaskensis	Proteobacteria	Rare	neg																					+
Oleidesulfovibrio vietnamensis	Proteobacteria	Rare	neg																					+
Oligella urethralis	Proteobacteria	Rare	neg																neg	neg				neg
Olsenella congonensis	Actinobacteria	Rare	+
Olsenella massiliensis	Actinobacteria	Rare	+		+							+							neg
Olsenella phocaeensis	Actinobacteria	Rare	+
Olsenella profusa	Actinobacteria	Rare	+		+							+							neg					neg
Olsenella timonensis	Actinobacteria	Rare	+
Olsenella uli	Actinobacteria	Rare	+	+	+							Major(+)							neg		neg
Olsenella urininfantis	Actinobacteria	Rare	+
Oribacterium asaccharolyticum	Firmicutes	Rare	vr		+														neg	black
Oribacterium parvum	Firmicutes	Rare	vr		+							+							neg
Oribacterium sinus	Firmicutes	Minor	vr		+							Major(+)							+	neg
Ornithinibacillus contaminans	Firmicutes	Unlikely	+																	beige
Ornithinibacillus massiliensis	Firmicutes	Rare	+
Ornithobacterium rhinotracheale	Bacteroidetes	Rare	neg													+			neg	neg				neg
Oscillibacter massiliensis	Firmicutes	Rare	neg
Oscillibacter ruminantium	Firmicutes	Rare	neg				+
Oscillibacter valericigenes	Firmicutes	Minor	neg		+				Major(+)
Oscillospira guillermondii	Firmicutes	Rare	+
Ottowia massiliensis	Pseudomonadota	Rare	neg
Oxalobacter formigenes	Proteobacteria	Moderate	neg																neg
Pacaella massiliensis	Synergistetes	Rare	neg
Paenarthrobacter aurescens	Actinobacteria	Rare	+																	yellow
Paenarthrobacter ilicis	Actinobacteria	Non	+																neg	yellow
Paenibacillus alvei	Firmicutes	Unlikely	+													+			+					neg
Paenibacillus amylolyticus	Firmicutes	Rare	+													neg			neg					neg
Paenibacillus anaericanus	Firmicutes	Rare	neg	+	+											+		+	neg					neg
Paenibacillus antibioticophila	Firmicutes	Rare	+																neg
Paenibacillus azoreducens	Firmicutes	Rare	vr													neg			neg
Paenibacillus barcinonensis	Firmicutes	Unlikely	+													neg			neg
Paenibacillus barengoltzii	Firmicutes	Unlikely	+													+			neg					neg
Paenibacillus borealis	Firmicutes	Unlikely	neg													neg			neg
Paenibacillus bouchesdurhonensis	Firmicutes	Rare	neg
Paenibacillus chibensis	Firmicutes	Unlikely	+													neg			neg	brownish-yellow				neg
Paenibacillus chitinolyticus	Firmicutes	Rare	vr													+				pale brownish-yellow
Paenibacillus cineris	Firmicutes	Rare	vr													d			neg
Paenibacillus cookii	Firmicutes	Unlikely	vr													+			neg					neg
Paenibacillus daejeonensis	Firmicutes	Rare	vr																neg					neg
Paenibacillus dendritiformis	Firmicutes	Rare	neg													neg			+	neg
Paenibacillus donghaensis	Firmicutes	Unlikely	+													+			neg					neg
Paenibacillus durus	Firmicutes	Rare	+	+	+							+				+		minor	neg					neg
Paenibacillus faecis	Firmicutes	Rare	+																neg
Paenibacillus favisporus	Firmicutes	Rare	vr													neg			neg					neg
Paenibacillus glucanolyticus	Firmicutes	Rare	neg													neg			neg
Paenibacillus graminis	Firmicutes	Unlikely	+																neg
Paenibacillus ihuae	Firmicutes	Rare	+
Paenibacillus ihumii	Firmicutes	Rare	neg
Paenibacillus illinoisensis	Firmicutes	Rare	+													neg			neg					neg
Paenibacillus jamilae	Firmicutes	Rare	vr													+
Paenibacillus kribbensis	Firmicutes	Rare	vr
Paenibacillus lactis	Firmicutes	Rare	neg													neg			neg					neg
Paenibacillus larvae	Firmicutes	Rare	+													neg			neg	orange				neg
Paenibacillus lautus	Firmicutes	Rare	vr													vr			neg					neg
Paenibacillus macerans	Firmicutes	Rare	+	+	+											neg		+	neg
Paenibacillus motobuensis	Firmicutes	Rare	neg													neg
Paenibacillus mucilaginosus	Firmicutes	Unlikely	neg													neg								neg
Paenibacillus naphthalenovorans	Firmicutes	Unlikely	+													+			neg					neg
Paenibacillus odorifer	Firmicutes	Unlikely	+
Paenibacillus pabuli	Firmicutes	Rare	+													neg			neg					neg
Paenibacillus pasadenensis	Firmicutes	Rare	+													+			neg					neg
Paenibacillus phocaensis	Firmicutes	Rare	neg																neg
Paenibacillus polymyxa	Firmicutes	Rare	neg													+		+	neg			+	+
Paenibacillus provencensis	Firmicutes	Rare	neg																neg
Paenibacillus pueri	Firmicutes	Rare	+																neg					neg
Paenibacillus rhizosphaerae	Firmicutes	Unlikely	+													+			neg					neg
Paenibacillus riograndensis	Firmicutes	Unlikely	vr													neg			neg					neg
Paenibacillus rubinfantis	Firmicutes	Rare	neg
Paenibacillus sabinae	Firmicutes	Rare	+													+			neg
Paenibacillus senegalensis	Firmicutes	Rare	neg																neg
Paenibacillus senegalimassiliensis	Firmicutes	Rare	vr
Paenibacillus stellifer	Firmicutes	Unlikely	+																neg
Paenibacillus thiaminolyticus	Firmicutes	Unlikely	+													neg			+	neg				neg
Paenibacillus timonensis	Firmicutes	Rare	+													neg
Paenibacillus tuaregi	Firmicutes	Rare	vr
Paenibacillus typhae	Firmicutes	Rare	+													neg			neg					neg
Paenibacillus urinalis	Firmicutes	Rare	neg													neg			neg
Paenibacillus xylanilyticus	Firmicutes	Rare	+													neg			neg					neg
Paeniclostridium ghonii	Firmicutes	Rare	+	trace(+)	Major(+)	trace(+)	+	+		+		trace(+)			trace(+)	neg	+	trace	+		+		+	+
Paeniclostridium sordellii	Firmicutes	Minor	+	+	+	minor(+)	+	minor(+)		minor(+)		minor(+)				+		minor	+		+		+	d(+)
Paenisporosarcina quisquiliarum	Firmicutes	Unlikely	+													neg			neg
Paludibacter jiangxiensis	Bacteroidetes	Rare	neg		+	+													neg					neg
Paludibacter propionicigenes	Bacteroidetes	Unlikely	neg		+	+									minor(+)				neg					neg
Paludibaculum fermentans	Acidobacteria	Unlikely	neg		+	+														neg		+	+
Paludicola psychrotolerans	Firmicutes	Rare	+
Pannonibacter phragmitetus	Proteobacteria	Unlikely	neg													neg			neg					neg
Pantoea agglomerans	Proteobacteria	Minor	neg													d(+)			neg	neg				neg
Pantoea conspicua	Proteobacteria	Rare	neg																neg	beige				neg
Pantoea eucalypti	Proteobacteria	Rare	neg													+			neg					neg
Pantoea rodasii	Proteobacteria	Unlikely	neg													+			neg					neg
Pantoea septica	Proteobacteria	Rare	neg													neg			neg	neg				neg
Pantoea vagans	Proteobacteria	Rare	neg													+			neg					neg
Papillibacter cinnamivorans	Firmicutes	Rare	+		+
Parabacteroides bouchesdurhonensis	Bacteroidetes	Minor	neg
Parabacteroides chinchillae	Bacteroidetes	Minor	neg																neg
Parabacteroides distasonis	Bacteroidetes	Widespread	neg		minor(+)	+		trace(+)		minor(+)		Major(+)			+				neg	neg				+
Parabacteroides faecis	Bacteroidetes	Rare	neg																neg	neg
Parabacteroides goldsteinii	Bacteroidetes	Moderate	neg	minor(+)	+	minor(+)				minor(+)					+				neg	neg
Parabacteroides gordonii	Bacteroidetes	Minor	neg		+										minor(+)				neg
Parabacteroides johnsonii	Bacteroidetes	Moderate	neg																neg	neg
Parabacteroides massiliensis	Bacteroidetes	Rare	neg																+
Parabacteroides merdae	Bacteroidetes	Widespread	neg		Major(+)	trace(+)		trace(+)		trace(+)					Major(+)	neg			neg				neg	+
Parabacteroides pacaensis	Bacteroidetes	Rare	neg
Parabacteroides pekinense	Bacteroidetes	Rare	neg
Parabacteroides provencensis	Bacteroidetes	Rare	neg
Parabacteroides timonensis	Bacteroidetes	Minor	neg
Paraburkholderia fungorum	Proteobacteria	Rare	neg																neg					neg
Paraburkholderia phytofirmans	Proteobacteria	Unlikely	neg																					neg
Paracholeplasma brassicae	Tenericutes	Unlikely	neg
Paraclostridium benzoelyticum	Firmicutes	Rare	+													neg			neg				+	+
Paraclostridium bifermentans	Firmicutes	Moderate	+	+	+	minor(+)	trace(+)	minor(+)		minor(+)						neg		minor	+		+		+	neg
Paracoccus aminovorans	Proteobacteria	Rare	neg													neg			neg		+			neg
Paracoccus carotinifaciens	Proteobacteria	Unlikely	neg																neg	reddish-orange
Paracoccus denitrificans	Proteobacteria	Rare	neg													neg			neg	neg				neg
Paracoccus haeundaensis	Proteobacteria	Unlikely	neg																neg	orange
Paracoccus marcusii	Proteobacteria	Non	neg																	orange
Paracoccus marinus	Proteobacteria	Unlikely	neg																neg	dull orange
Paracoccus sphaerophysae	Proteobacteria	Unlikely	neg													neg			neg	+
Paracoccus yeei	Proteobacteria	Rare	neg																neg	+				neg
Paraeggerthella hongkongensis	Actinobacteria	Rare	+																neg
Parafannyhessea umbonata	Actinobacteria	Unlikely	+	minor(+)	minor(+)							+							neg		+			neg
Paraliobacillus quinghaiensis	Firmicutes	Non	+													neg			neg					neg
Paramuribaculum intestinale	Bacteroidetes	Rare	neg
Paraprevotella clara	Bacteroidetes	Moderate	neg		+										+				neg
Paraprevotella xylaniphila	Bacteroidetes	Moderate	neg		+										+				neg
Pararheinheimera texasensis	Proteobacteria	Rare	neg																neg
Parascardovia denticolens	Actinobacteria	Rare	+		+							+				+			neg					neg
Parasphingorhabdus flavimaris	Proteobacteria	Unlikely	neg																	yellow				neg
Parasporobacterium paucivorans	Firmicutes	Rare	neg		Major(+)		+
Parasutterella excrementihominis	Proteobacteria	Moderate	neg
Parasutterella secunda	Proteobacteria	Rare	neg		+														neg
Paratractidigestivibacter faecalis	Actinobacteria	Rare	+									Major(+)							neg
Paremcibacter congregatus	Proteobacteria	Unlikely	neg													+			neg	pale yellow				+
Parolsenella catena	Actinobacteria	Rare	+									+							neg	neg		+		neg
Parolsenella massiliensis	Actinobacteria	Rare	+									+							neg					neg
Parvibacter caecicola	Actinobacteria	Rare	+																neg
Parvimonas micra	Firmicutes	Moderate	+		+											neg			neg		+	+
Pasteurella aerogenes	Proteobacteria	Rare	neg													neg			neg	neg				neg
Pasteurella dagmatis	Proteobacteria	Rare	neg																+
Pasteurella multocida	Proteobacteria	Rare	neg													neg			+	neg				neg
Paucilactobacillus oligofermentans	Firmicutes	Non	+									+
Paucilactobacillus suebicus	Firmicutes	Unlikely	+		+							+						+				+
Paucilactobacillus vaccinostercus	Firmicutes	Unlikely	+		+							+						+
Paucisalibacillus globulus	Firmicutes	Unlikely	+
Pauljensenia bouchesdurhonensis	Actinobacteria	Minor	+
Pauljensenia cellulosilytica	Actinobacteria	Rare	+
Pauljensenia hongkongensis	Actinobacteria	Rare	+
Pauljensenia keddieii	Actinobacteria	Minor	+
Pauljensenia odontolyticus	Actinobacteria	Rare	+
Pauljensenia turicensis	Actinobacteria	Rare	+
Pectobacterium wasabiae	Proteobacteria	Unlikely	neg													neg			neg					+
Pediococcus acidilactici	Firmicutes	Rare	+									+				+			+
Pediococcus claussenii	Firmicutes	Rare
Pediococcus damnosus	Firmicutes	Unlikely	+									+
Pediococcus pentosaceus	Firmicutes	Minor	+									+				+			neg					neg
Pedobacter cryoconitis	Proteobacteria	Non	neg																neg	light yellow				neg
Pedobacter daejeonensis	Proteobacteria	Unlikely	neg													neg			neg	yellow
Pedobacter panaciterrae	Bacteroidetes	Unlikely	neg													+			neg					neg
Pedobacter terricola	Bacteroidetes	Non	neg																neg	pale orange				neg
Pedomicrobium ferrugineum	Proteobacteria	Rare	neg
Pelistega indica	Proteobacteria	Rare	neg													neg			+
Pelobacter propionicus	Proteobacteria	Rare	neg		+	+	+												neg
Pelomonas aquatica	Proteobacteria	Rare	neg
Pelomonas puraquae	Proteobacteria	Rare	neg
Pelomonas saccharophila	Proteobacteria	Rare	neg																neg
Peptacetobacter hiranonis	Firmicutes	Minor	+		+	minor(+)		minor(+)		+									neg
Peptoclostridium acidaminophilum	Firmicutes	Unlikely	+		+																+	+
Peptococcus niger	Firmicutes	Rare	+		+		+	+		+										black	+		+	+
Peptoniphilus asaccharolyticus	Firmicutes	Minor	+				+									neg			d(+)
Peptoniphilus catoniae	Firmicutes	Rare	+		+		+												neg
Peptoniphilus colimassiliensis	Firmicutes	Rare	+
Peptoniphilus duerdenii	Firmicutes	Rare	+		+	+	+	trace(+)	trace(+)	trace(+)					trace(+)				neg
Peptoniphilus gorbachii	Firmicutes	Rare	+		Major(+)	trace(+)	+
Peptoniphilus grossensis	Firmicutes	Rare	+																+
Peptoniphilus harei	Firmicutes	Minor	+		+	minor(+)	+		minor(+)	minor(+)									neg
Peptoniphilus indolicus	Firmicutes	Rare	+		neg	+	+					+							+		+
Peptoniphilus ivorii	Firmicutes	Rare	+		minor(+)	minor(+)	+	minor(+)		+									neg
Peptoniphilus koenoeneniae	Firmicutes	Rare	+		trace(+)	+	+							trace(+)					+
Peptoniphilus lacrimalis	Firmicutes	Minor	+		+	minor(+)	+					minor(+)				neg			neg
Peptoniphilus obesi	Firmicutes	Rare	+																neg
Peptoniphilus pacaensis	Firmicutes	Rare	+																neg
Peptoniphilus phoceensis	Firmicutes	Rare	+
Peptoniphilus senegalensis	Firmicutes	Rare	+																+
Peptoniphilus timonensis	Firmicutes	Rare	+																+
Peptostreptococcus anaerobius	Firmicutes	Moderate	+		+		+	+								neg			neg
Peptostreptococcus russellii	Firmicutes	Rare	+	minor(+)	+						minor(+)	minor(+)			trace(+)				neg
Peptostreptococcus stomatis	Firmicutes	Minor	+		+		trace(+)	minor(+)		minor(+)		+				neg			neg
Peribacillus psychrosaccharolyticus	Firmicutes	Unlikely	vr													d			neg	neg
Peribacillus simplex	Firmicutes	Rare	vr													neg			neg					neg
Petrimonas mucosa	Bacteroidetes	Unlikely	neg		+	+	trace(+)			minor(+)												minor(+)	trace(+)
Petrimonas sulfuriphila	Bacteroidetes	Rare	neg		+																	+	+	+
Petrobacter succinatimandens	Proteobacteria	Rare	neg
Petrocella atlantisensis	Firmicutes	Unlikely	+	+	+																	+	+
Phascolarctobacterium faecium	Firmicutes	Minor	neg			Major(+)													neg
Phascolarctobacterium succinatutens	Firmicutes	Moderate	neg			+													neg
Phenylobacterium falsum	Proteobacteria	Unlikely	neg
Phenylobacterium haematophilum	Proteobacteria	Rare	neg																neg
Phenylobacterium lituiforme	Proteobacteria	Unlikely	neg																	yellow
Phocaeicola barnesiae	Bacteroidetes	Moderate	neg		+					minor(+)					+				neg
Phocaeicola coprocola	Bacteroidetes	Widespread	neg																neg
Phocaeicola coprophilus	Bacteroidetes	Widespread	neg		+	minor(+)				minor(+)				minor(+)	+				neg
Phocaeicola dorei	Bacteroidetes	Widespread	neg																neg
Phocaeicola massiliensis	Bacteroidetes	Minor	neg																neg
Phocaeicola paurosaccharolyticus	Bacteroidetes	Rare	neg		+	+									+				neg					neg
Phocaeicola plebeius	Bacteroidetes	Widespread	neg																neg
Phocaeicola salanitronis	Bacteroidetes	Minor	neg																neg
Phocaeicola sartorii	Bacteroidetes	Moderate	neg																neg
Phocaeicola vulgatus	Bacteroidetes	Widespread	neg		Major(+)	minor(+)		neg		neg		+			Major(+)	neg			neg	neg				+
Phocea massiliensis	Firmicutes	Minor	neg
Phoenicibacter congonensis	Actinobacteria	Rare	+			+	+												+
Phyllobacterium myrsinacearum	Proteobacteria	Rare	neg													neg			neg				+	+
Pigmentiphaga kullae	Proteobacteria	Rare	neg
Planococcus massiliensis	Firmicutes	Unlikely	+																neg
Planococcus rifietoensis	Firmicutes	Unlikely	+																	orange
Planomicrobium chinense	Firmicutes	Unlikely	+
Planomicrobium koreense	Firmicutes	Unlikely	+																	yellow-orange
Planomicrobium okeanokoites	Firmicutes	Unlikely	+													neg			neg	bright orange
Plesiomonas shigelloides	Proteobacteria	Rare	neg													vr			+	neg				neg
Pluralibacter gergoviae	Proteobacteria	Rare	neg													+			neg	neg				neg
Pontibacillus litoralis	Firmicutes	Rare	+													neg			neg	neg				neg
Porphyromonas asaccharolytica	Bacteroidetes	Minor	neg		+	minor(+)	+	minor(+)		minor(+)									+	black
Porphyromonas bennonis	Bacteroidetes	Rare	neg		+										+				neg	beige
Porphyromonas cangingivalis	Bacteroidetes	Unlikely	neg		Major(+)	+	+	minor(+)		+					neg				+	cream-tan	+
Porphyromonas canoris	Bacteroidetes	Rare	neg		+	+	minor(+)	minor(+)		+					+				+	brick red fluorescence	+
Porphyromonas crevioricanis	Bacteroidetes	Unlikely	neg																+	black
Porphyromonas endodontalis	Bacteroidetes	Minor	neg		+	minor(+)	+	minor(+)		minor(+)									+	black				+
Porphyromonas gingivalis	Bacteroidetes	Unlikely	neg		+	minor(+)	+	minor(+)		minor(+)									+	black
Porphyromonas levii	Bacteroidetes	Rare	neg		+	minor(+)	+	minor(+)		minor(+)					minor(+)
Porphyromonas macacae	Bacteroidetes	Rare	neg		+		+	minor(+)		minor(+)									+	+
Porphyromonas somerae	Bacteroidetes	Minor	neg		+	+	+	minor(+)		+					minor(+)				neg	black
Porphyromonas uenonis	Bacteroidetes	Minor	neg		+	+	+			+					+				+	black
Pragia fontium	Proteobacteria	Rare	neg													neg			neg					+
Prevotella albensis	Bacteroidetes	Rare	neg	minor(+)	Major(+)	minor(+)		trace(+)		trace(+)					Major(+)				neg	neg
Prevotella amnii	Bacteroidetes	Rare	neg		+					minor(+)		minor(+)			+				neg
Prevotella aurantiaca	Bacteroidetes	Rare	neg																+	orange fluorescence
Prevotella baroniae	Bacteroidetes	Rare	neg		+			minor(+)		minor(+)					+				neg
Prevotella bergensis	Bacteroidetes	Moderate	neg		+					trace(+)					+				neg
Prevotella bivia	Bacteroidetes	Moderate	neg		+			trace(+)		trace(+)		trace(+)			+				neg	neg
Prevotella brevis	Bacteroidetes	Minor	neg	trace(+)	+	trace(+)		trace(+)		trace(+)					+					neg
Prevotella bryantii	Bacteroidetes	Rare	neg	trace(+)	+	trace(+)		trace(+)		trace(+)					+				neg	neg
Prevotella buccae	Bacteroidetes	Minor	neg	minor(+)	+			minor(+)		minor(+)					+				neg	neg			neg
Prevotella buccalis	Bacteroidetes	Minor	neg		Major(+)							minor(+)			Major(+)				neg	neg
Prevotella conceptionensis	Bacteroidetes	Rare	neg																+
Prevotella copri	Bacteroidetes	Widespread	neg																neg	neg
Prevotella corporis	Bacteroidetes	Moderate	neg		+			minor(+)		minor(+)					+				neg	dark brown			neg	neg
Prevotella dentalis	Bacteroidetes	Minor	neg		+										+				neg	neg
Prevotella dentasini	Bacteroidetes	Rare	neg																neg	black
Prevotella denticola	Bacteroidetes	Minor	neg		+			trace(+)		trace(+)		trace(+)			Major(+)				vr	dark brown (variable)			neg
Prevotella disiens	Bacteroidetes	Minor	neg	trace(+)	+	trace(+)		trace(+)		trace(+)		trace(+)			+				neg	neg
Prevotella enoeca	Bacteroidetes	Rare	neg	trace(+)	+										Major(+)				neg	neg			neg	d(+)
Prevotella falsenii	Bacteroidetes	Rare
Prevotella fusca	Bacteroidetes	Unlikely	neg		+			trace(+)		+		minor(+)			Major(+)				neg	orange-brown
Prevotella herbatica	Bacteroidetes	Unlikely	neg		+										+
Prevotella histicola	Bacteroidetes	Rare	neg		+					trace(+)		trace(+)			+				neg	variable
Prevotella ihumii	Bacteroidetes	Rare	neg																neg	black
Prevotella intermedia	Bacteroidetes	Minor	neg		+			trace(+)		minor(+)					Major(+)				+	dark colours			neg
Prevotella jejuni	Bacteroidetes	Rare	neg		+					minor(+)					+				neg	+	+
Prevotella lascolaii	Bacteroidetes	Minor	neg																neg
Prevotella loescheii	Bacteroidetes	Rare	neg																neg	+
Prevotella maculosa	Bacteroidetes	Rare	neg		+										+				neg	neg
Prevotella marseillensis	Bacteroidetes	Rare	neg
Prevotella marshii	Bacteroidetes	Rare	neg		+	+									+				neg	neg
Prevotella melaninogenica	Bacteroidetes	Moderate	neg	trace(+)	+			minor(+)		minor(+)					Major(+)				neg	black
Prevotella merdae	Bacteroidetes	Rare	neg
Prevotella micans	Bacteroidetes	Rare	neg		+			minor(+)		+					+				+	yellow-orange
Prevotella multiformis	Bacteroidetes	Rare	neg		+					minor(+)					+				neg
Prevotella multisaccharivorax	Bacteroidetes	Minor	neg		+					minor(+)					+				neg	neg
Prevotella nanceiensis	Bacteroidetes	Rare	neg		+							+			+				neg	neg
Prevotella nigrescens	Bacteroidetes	Minor	neg		+			+		+					+				+	+			neg	neg
Prevotella oralis	Bacteroidetes	Minor	neg		+			minor(+)		minor(+)					+				neg	neg			neg
Prevotella oris	Bacteroidetes	Moderate	neg		+			trace(+)		trace(+)					Major(+)				neg				neg
Prevotella oryzae	Bacteroidetes	Unlikely	neg		+	+							minor(+)		+				neg					neg
Prevotella oulorum	Bacteroidetes	Rare	neg		+										+				neg	neg
Prevotella pallens	Bacteroidetes	Rare	neg		+					minor(+)					+				+	light brown
Prevotella paludivivens	Bacteroidetes	Rare	neg		+										+				neg					neg
Prevotella phocaeensis	Bacteroidetes	Rare	neg
Prevotella pleuritidis	Bacteroidetes	Rare	neg		+										+				neg
Prevotella rara	Bacteroidetes	Rare	neg		+					trace(+)					Major(+)				neg	light brown
Prevotella rectalis	Bacteroidetes	Rare	neg
Prevotella ruminicola	Bacteroidetes	Minor	neg	+	+	minor(+)		minor(+)		minor(+)					Major(+)	neg			neg	neg				neg
Prevotella saccharolytica	Bacteroidetes	Rare	neg		+										+				neg	neg
Prevotella salivae	Bacteroidetes	Rare	neg		Major(+)					minor(+)					Major(+)				neg	neg
Prevotella scopos	Bacteroidetes	Unlikely	neg		+			minor(+)		+		trace(+)			Major(+)				neg	light orange
Prevotella seregens	Bacteroidetes	Rare
Prevotella shahii	Bacteroidetes	Rare	neg		+										+				neg	light brown
Prevotella stercorea	Bacteroidetes	Moderate	neg		+					minor(+)					+				neg	neg
Prevotella timonensis	Bacteroidetes	Minor	neg																neg	neg
Prevotella veroralis	Bacteroidetes	Minor	neg		+			+		+					Major(+)				neg	neg
Prevotellamassilia timonensis	Bacteroidetes	Minor	neg
Priestia flexa	Firmicutes	Rare	vr													neg				neg
Priestia koreensis	Firmicutes	Unlikely	+
Priestia megaterium	Firmicutes	Rare	+													neg			neg					neg
Prochlorococcus marinus	Cyanobacteria	Rare	neg
Prolixibacter bellariivorans	Bacteroidetes	Unlikely	neg		+	+									+				+	neg
Propionibacterium acidifaciens	Actinobacteria	Rare	+		Major(+)	Major(+)									+				neg
Propionibacterium freudenreichii	Actinobacteria	Rare	+													vr			+
Propionimicrobium lymphophilum	Actinobacteria	Rare	neg	minor(+)	+	+				+					+	neg			neg
Prosthecobacter fluviatilis	Verrucomicrobia	Rare	neg
Proteiniphilum saccharofermentans	Bacteroidetes	Unlikely	neg		+	+				minor(+)												minor(+)	minor(+)
Proteus mirabilis	Proteobacteria	Moderate	neg													vr			neg					+
Proteus penneri	Proteobacteria	Rare	neg													neg			neg					vr
Proteus vulgaris	Proteobacteria	Rare	neg													neg			+					+
Provencibacterium massiliense	Firmicutes	Moderate	neg
Providencia alcalifaciens	Proteobacteria	Minor	neg													neg			+					neg
Providencia heimbachae	Proteobacteria	Rare	neg													neg			neg	reddish-brown				neg
Providencia rettgeri	Proteobacteria	Minor	neg													neg			+					neg
Providencia rustigianii	Proteobacteria	Rare	neg													neg			+					neg
Providencia stuartii	Proteobacteria	Rare	neg													neg			+					neg
Pseudarthrobacter oxydans	Actinobacteria	Rare	+
Pseudarthrobacter polychromogenes	Actinobacteria	Unlikely	vr																neg	blue				neg
Pseudescherichia vulneris	Proteobacteria	Rare	neg													neg			neg	yellow (variable)				neg
Pseudobutyrivibrio ruminis	Firmicutes	Rare	neg	+	minor(+)		+					+												neg
Pseudobutyrivibrio xylanivorans	Firmicutes	Unlikely	neg	+	neg		+					+			trace(+)			minor						neg
Pseudochrobactrum asaccharolyticum	Proteobacteria	Rare	neg
Pseudochrobactrum saccharolyticum	Proteobacteria	Rare	neg																	beige
Pseudocitrobacter anthropi	Proteobacteria	Rare	neg																neg					neg
Pseudocitrobacter faecalis	Proteobacteria	Rare	neg													neg			neg					neg
Pseudoclavibacter alba	Actinobacteria	Rare	+
Pseudoclavibacter helvolus	Actinobacteria	Unlikely	+																	yellow
Pseudoclavibacter sp. Timone	Actinobacteria	Rare	+		minor(+)														neg
Pseudoclostridium thermosuccinogenes	Firmicutes	Unlikely	neg	+	+							+			+								+	+
Pseudodesulfovibrio aespoeensis	Proteobacteria	Unlikely	neg		+
Pseudodesulfovibrio indicus	Proteobacteria	Unlikely	neg
Pseudoflavonifractor capillosus	Firmicutes	Moderate	neg		+	minor(+)						minor(+)			+				neg					neg
Pseudoglutamicibacter albus	Actinobacteria	Rare	+																	white
Pseudoglutamicibacter cumminsii	Actinobacteria	Unlikely	+
Pseudomonas aeruginosa	Proteobacteria	Rare	neg													vr			neg	green				neg
Pseudomonas alcaligenes	Proteobacteria	Non	neg																neg	variable
Pseudomonas alcaliphila	Proteobacteria	Rare	neg																neg	white
Pseudomonas asiatica	Proteobacteria	Rare	neg													neg				fluorescent
Pseudomonas asplenii	Proteobacteria	Unlikely	neg																neg	Fluorescent
Pseudomonas boreopolis	Proteobacteria	Non	neg																neg					neg
Pseudomonas caricapapayae	Proteobacteria	Non	neg																neg	green
Pseudomonas chlororaphis	Proteobacteria	Non	neg																	green
Pseudomonas citronellolis	Proteobacteria	Rare	neg													neg			neg					neg
Pseudomonas fluorescens	Proteobacteria	Unlikely	neg													neg			neg					neg
Pseudomonas fragi	Proteobacteria	Rare	neg																		+
Pseudomonas fulva	Proteobacteria	Rare	neg																	yellow
Pseudomonas gessardii	Proteobacteria	Non	neg													neg			neg	fluorescent				neg
Pseudomonas japonica	Proteobacteria	Non	neg																	neg
Pseudomonas libanensis	Proteobacteria	Non	neg													neg			neg	fluorescent
Pseudomonas lundensis	Proteobacteria	Non	neg													neg			neg	fluorescent				neg
Pseudomonas luteola	Proteobacteria	Unlikely	neg																neg	deep yellow				neg
Pseudomonas massiliensis	Proteobacteria	Non	neg																neg
Pseudomonas mendocina	Proteobacteria	Rare	neg																	yellow
Pseudomonas migulae	Proteobacteria	Non	neg													neg			neg	fluorescent
Pseudomonas monteilii	Proteobacteria	Unlikely	neg													neg			neg	fluorescent
Pseudomonas mosselii	Proteobacteria	Non	neg													neg				fluorescent
Pseudomonas nitroreducens	Proteobacteria	Unlikely	neg																neg	fluorescent				neg
Pseudomonas oleovorans	Proteobacteria	Unlikely	neg																neg	fluorescent
Pseudomonas oryzihabitans	Proteobacteria	Unlikely	neg																neg	yellow				neg
Pseudomonas parafulva	Proteobacteria	Unlikely	neg																	pale yellow
Pseudomonas protegens	Proteobacteria	Unlikely	neg																	white-yellow
Pseudomonas putida Biovar A	Proteobacteria	Rare	neg													neg			neg	yellow, fluorescent				neg
Pseudomonas putida Biovar B	Proteobacteria	Rare	neg													neg			neg	yellow, fluorescent				neg
Pseudomonas rhodesiae	Proteobacteria	Non	neg													neg			neg	fluorescent
Pseudomonas saudiphocaensis	Proteobacteria	Rare	neg
Pseudomonas straminea	Proteobacteria	Unlikely	neg													neg			neg	yellow				neg
Pseudomonas stutzeri	Proteobacteria	Unlikely	neg																neg	reddish-brown (variable)
Pseudomonas taetrolens	Proteobacteria	Non	neg
Pseudomonas tolaasii	Proteobacteria	Unlikely	neg																w	fluorescent
Pseudomonas veronii	Proteobacteria	Rare	neg																	Fluorescent
Pseudomonas weihenstephanensis	Proteobacteria	Unlikely	neg																neg	Fluorescent				neg
Pseudomonas xanthomarina	Proteobacteria	Non	neg													neg			neg	yellow-orange				neg
Pseudomonas yamanorum	Proteobacteria	Unlikely	neg													neg			neg	green fluorescent				neg
Pseudomonas zhaodongensis	Proteobacteria	Unlikely	neg													+			neg	yellow-orange				neg
Pseudonocardia dioxanivorans	Actinobacteria	Unlikely	+
Pseudoprevotella muciniphila	Bacteroidetes	Rare	neg		+										+				neg
Pseudopropionibacterium massiliense	Actinobacteria	Rare	+
Pseudoramibacter alactolyticus	Firmicutes	Rare	+	+	+		+									neg			neg				+	neg
Pseudoruegeria marinistellae	Proteobacteria	Rare	neg
Pseudoruminococcus massiliensis	Firmicutes	Rare	neg																neg
Pseudoxanthomonas broegbernensis	Proteobacteria	Unlikely	neg																neg	yellow
Pseudoxanthomonas japonensis	Proteobacteria	Unlikely	neg																neg
Pseudoxanthomonas mexicana	Proteobacteria	Rare	neg																neg
Pseudoxanthomonas spadix	Proteobacteria	Rare	neg													+			neg	brown				neg
Pseudoxanthomonas suwonensis	Proteobacteria	Rare	neg																neg
Pseudoxanthomonas taiwanensis	Proteobacteria	Rare	neg																	light yellow
Psychrobacter alimentarius	Proteobacteria	Unlikely	+																neg					neg
Psychrobacter arenosus	Proteobacteria	Unlikely	neg																neg	neg				neg
Psychrobacter cibarius	Proteobacteria	Unlikely	neg
Psychrobacter faecalis	Proteobacteria	Unlikely	neg																neg	beige				neg
Psychrobacter fulvigenes	Proteobacteria	Rare	neg																neg	brown-black				neg
Psychrobacter maritimus	Proteobacteria	Unlikely	neg																neg	neg				neg
Psychrobacter namhaensis	Proteobacteria	Unlikely	neg																neg					neg
Psychrobacter phenylpyruvicus	Proteobacteria	Rare	neg																neg	neg				neg
Psychrobacter pulmonis	Proteobacteria	Unlikely	neg													+			neg
Pusillimonas faecalis	Firmicutes	Rare	neg
Pygmaiobacter massiliensis	Firmicutes	Minor	+
Pyramidobacter piscolens	Synergistetes	Minor	neg		Major(+)	minor(+)		minor(+)		+					minor(+)				neg					+
Rahnella aquatilis	Proteobacteria	Unlikely	neg													+			neg	neg				neg
Ralstonia mannitolilytica	Proteobacteria	Rare	neg																neg	beige				neg
Ralstonia pickettii Biovar Va-1&2	Proteobacteria	Rare	neg																neg	beige				neg
Raoultella ornithinolytica	Proteobacteria	Minor	neg													+			+	neg				neg
Raoultella planticola	Proteobacteria	Rare	neg													+			neg					neg
Raoultella terrigena	Proteobacteria	Rare	neg													+			neg					neg
Raoultibacter massiliensis	Actinobacteria	Rare	+																+
Raoultibacter timonensis	Actinobacteria	Rare	+																+
Rheinheimera perlucida	Proteobacteria	Unlikely	neg																neg	neg				neg
Rhizobium metallidurans	Proteobacteria	Unlikely	neg
Rhizorhabdus wittichii	Proteobacteria	Unlikely	neg																neg
Rhodanobacter ginsenosidimutans	Proteobacteria	Unlikely	neg																neg
Rhodococcus erythropolis	Actinobacteria	Rare	+													neg			neg	pink				neg
Rhodococcus hoagii	Actinobacteria	Rare	+
Rhodococcus jostii	Actinobacteria	Non	+																	light pink
Rhodococcus opacus	Actinobacteria	Unlikely	+													neg
Rhodococcus qingshengii	Actinobacteria	Unlikely	+													+				orange
Rhodococcus rhodochrous	Actinobacteria	Rare	+													d			neg					neg
Rhodoplanes serenus	Proteobacteria	Unlikely	neg																	pinkish-red
Rhodothermus marinus	Bacteroidetes	Non	neg																	red
Riemerella columbina	Bacteroidetes	Rare	neg													+			neg	beige
Rikenella microfusus	Bacteroidetes	Rare	neg		+	+									Major(+)	neg		+	neg		neg			neg
Risungbinella massiliensis	Firmicutes	Rare	+
Robertmurraya andreesenii	Firmicutes	Unlikely	+													neg			neg
Robertmurraya kyonggiensis	Firmicutes	Rare	+
Robertmurraya massiliosenegalensis	Firmicutes	Rare	+																neg	neg
Robinsoniella peoriensis	Firmicutes	Rare	+	minor(+)	+		neg					minor(+)			+			minor	neg
Romboutsia hominis	Firmicutes	Rare	+	+	+							minor(+)						+	neg
Romboutsia ilealis	Firmicutes	Rare	vr	+	+							+							neg			+	+	+
Romboutsia lituseburensis	Firmicutes	Minor	+	+	+	minor(+)	minor(+)			minor(+)		minor(+)							neg				minor(+)
Romboutsia maritimum	Firmicutes	Rare	+
Romboutsia timonensis	Firmicutes	Moderate	+
Romboutsia weinsteinii	Firmicutes	Rare	+
Roseburia faecis	Firmicutes	Widespread	vr	+			Major(+)					minor(+)							neg
Roseburia hominis	Firmicutes	Widespread	vr	+			Major(+)					+							neg
Roseburia intestinalis	Firmicutes	Widespread	vr	+			Major(+)					neg							neg
Roseburia inulinivorans	Firmicutes	Widespread	vr	+			Major(+)					+							neg
Roseobacter denitrificans	Proteobacteria	Non	neg																	pink
Roseomonas gilardii	Proteobacteria	Rare	neg																neg	pink				neg
Roseomonas mucosa	Proteobacteria	Rare	neg																neg	pink
Rossellomorea aquimaris	Firmicutes	Unlikely	vr																	orange-yellow
Rossellomorea marisflavi	Firmicutes	Rare	vr
Rossellomorea vietnamensis	Firmicutes	Rare	+																neg					neg
Rothia aeria	Actinobacteria	Minor	+													+			neg
Rothia dentocariosa	Actinobacteria	Minor	+		+							Major(+)			minor(+)	vr			neg	+				d(+)
Rothia halotolerans	Actinobacteria	Unlikely	+																	pale yellow				neg
Rothia koreensis	Actinobacteria	Rare	+																neg	pale orange
Rothia kristinae	Actinobacteria	Rare	+													+				pale orange				neg
Rothia mucilaginosa	Actinobacteria	Moderate	+													vr			neg					neg
Rothia terrae	Actinobacteria	Rare	+													+				neg				neg
Rubeoparvulum massiliense	Firmicutes	Rare	neg																neg
Rubinisphaera brasiliensis	Planctomycetes	Non	neg																	yellow				+
Rubneribacter badeniensis	Actinobacteria	Minor	+																neg
Rubrobacter xylanophilus	Actinobacteria	Non	+																	pink
Rudanella lutea	Bacteroidetes	Unlikely	neg		+														neg	orange
Ruminiclostridium cellobioparum	Firmicutes	Rare	vr		+													+				+	+
Ruminiclostridium cellulolyticum	Firmicutes	Unlikely	+	+	+							+				neg		+	neg			+	+
Ruminiclostridium herbifermentans	Firmicutes	Unlikely	vr		+													+		yellow
Ruminiclostridium josui	Firmicutes	Rare	+		+	trace(+)	trace(+)											+	neg			+	+
Ruminococcus albus	Firmicutes	Moderate	+	+	+													+	neg
Ruminococcus bicirculans	Firmicutes	Moderate	+	+	+													Major
Ruminococcus bovis	Firmicutes	Unlikely	+		+	neg	neg					neg		neg	neg		neg	minor
Ruminococcus bromii	Firmicutes	Widespread	+	minor(+)	+	minor(+)	+					minor(+)						+	neg
Ruminococcus callidus	Firmicutes	Widespread	+	+	+		+					minor(+)		minor(+)	Major(+)					neg	neg		+	neg
Ruminococcus champanellensis	Firmicutes	Moderate	+		+		+								+				neg
Ruminococcus flavefaciens	Firmicutes	Moderate	+	+	+							+			+			+	neg				+
Ruminococcus gauvreauii	Firmicutes	Minor	+		+														neg
Ruminococcus gnavus	Firmicutes	Widespread	+	+	+	+										neg			neg
Ruminococcus lactaris	Firmicutes	Widespread	+	+	+							+							neg		neg		+	neg
Ruminococcus phoceensis	Firmicutes	Rare	+
Ruminococcus torques	Firmicutes	Widespread	+	minor(+)	minor(+)	+						Major(+)			trace(+)			+	+				+
Rummeliibacillus pycnus	Firmicutes	Unlikely	+													neg			+	neg				neg
Rummeliibacillus stabekisii	Firmicutes	Rare	+																neg	neg
Rummeliibacillus suwonensis	Firmicutes	Rare	+																+
Ruoffia tabacinasalis	Firmicutes	Rare	+													neg				neg
Ruthenibacterium lactatiformans	Firmicutes	Moderate	neg									+			+				neg	neg
Saccharibacillus brassicae	Firmicutes	Unlikely	+													+			neg	pinkish-red
Saccharofermentans acetigenes	Firmicutes	Non	+		+							+				neg			neg					neg
Salimicrobium jeotgali	Firmicutes	Non	+																+	yellow
Salinicoccus halodurans	Firmicutes	Unlikely	+	+												neg			neg					+
Salinisphaera halophila	Proteobacteria	Non	neg													neg			neg					neg
Salinivibrio costicola	Proteobacteria	Rare	neg													+			neg	neg
Salmonella bongori	Proteobacteria	Rare	neg																neg
Salmonella enterica	Proteobacteria	Unlikely	neg													vr			neg					+
Salmonella enterica subsp. arizonae	Proteobacteria	Non	neg																neg					+
Salmonella enterica subsp. enterica serovar Choleraesuis	Proteobacteria	Unlikely	neg													neg			neg					vr
Salmonella enterica subsp. enterica serovar Enteritidis	Proteobacteria	Rare	neg													neg			neg					+
Salmonella enterica subsp. enterica serovar Paratyphi A	Proteobacteria	Rare	neg													neg			neg					neg
Salmonella enterica subsp. enterica serovar Typhi	Proteobacteria	Rare	neg													neg			neg					+
Salmonella enterica subsp. enterica serovar Typhimurium	Proteobacteria	Rare	neg													neg			neg					+
Sanguibacter massiliensis	Actinobacteria	Rare	+
Sarcina maxima	Firmicutes	Rare	+		+		+													neg		+	+
Sarcina ventriculi	Firmicutes	Minor	+		+													+		neg		+	+
Scardovia inopinata	Actinobacteria	Rare	+		Major(+)							+				+			neg		neg			neg
Scardovia wiggsiae	Actinobacteria	Minor	+		+							+							neg					neg
Schaalia cardiffensis	Actinobacteria	Rare	+		+							+			+	neg			neg
Schaalia hyovaginalis	Actinobacteria	Rare	+
Schaalia meyeri	Actinobacteria	Rare	+	+	+							minor(+)		minor(+)	+	neg			neg		neg			neg
Schaalia odontolytica	Actinobacteria	Moderate	+													neg			neg	dark red	neg			neg
Schaalia radingae	Actinobacteria	Rare	+									+			+
Schaalia turicensis	Actinobacteria	Rare	+
Schleiferilactobacillus harbinensis	Firmicutes	Unlikely	+		+							+						+
Schleiferilactobacillus perolens	Firmicutes	Unlikely	+									+												neg
Schleiferilactobacillus shenzhenensis	Firmicutes	Unlikely
Schlesneria paludicola	Planctomycetes	Unlikely	neg
Schnuerera ultunensis	Firmicutes	Unlikely	+	neg	Major(+)														+			+	+
Sebaldella termitidis	Fusobacteria	Unlikely	neg	neg	+							+							neg		+	+		d(+)
Sediminibacillus massiliensis	Firmicutes	Rare	+
Sediminispirochaeta smaragdinae	Spirochaetes	Unlikely	neg		+							+			+			+				+	+	+
Selenomonas artemidis	Firmicutes	Rare	neg		+	+													neg				trace(+)	neg
Selenomonas bovis	Firmicutes	Rare	neg		+	+										neg			neg			+		+
Selenomonas flueggei	Firmicutes	Rare	neg		+	+													neg		minor		neg	neg
Selenomonas infelix	Firmicutes	Rare	neg		+	+													neg				neg	neg
Selenomonas noxia	Firmicutes	Rare	neg		+	+						+							neg		neg			neg
Selenomonas ruminantium	Firmicutes	Minor	neg		+	+						neg				neg			neg			+		+
Selenomonas sputigena	Firmicutes	Rare	neg		+	+						neg			trace(+)							+		neg
Selenomonas timonae	Firmicutes	Unlikely	neg
Sellimonas intestinalis	Firmicutes	Minor	+		Major(+)														neg					neg
Senegalia massiliensis	Firmicutes	Rare	+																neg
Senegalimassilia anaerobia	Actinobacteria	Minor	+
Senegalimassilia faecalis	Actinobacteria	Rare	+
Serratia ficaria	Proteobacteria	Rare	neg													+			neg	neg				neg
Serratia fonticola	Proteobacteria	Rare	neg													neg			neg					neg
Serratia liquefaciens	Proteobacteria	Rare	neg													d			neg					neg
Serratia marcescens	Proteobacteria	Minor	neg													+			neg	+				neg
Serratia odorifera	Proteobacteria	Rare	neg													d			w	neg				neg
Serratia quinivorans	Proteobacteria	Rare	neg													+			neg
Serratia ureilytica	Proteobacteria	Rare	neg													+			neg	neg				neg
Sharpea azabuensis	Firmicutes	Rare	+									+										+
Shewanella algae	Proteobacteria	Unlikely	neg													neg				neg				+
Shewanella carassii	Proteobacteria	Rare	neg													neg			neg	pink-orange				+
Shewanella decolorationis	Proteobacteria	Rare	neg																	neg				+
Shewanella xiamenensis	Proteobacteria	Rare	neg																					+
Shigella boydii	Proteobacteria	Rare	neg													neg			(d)	neg				neg
Shigella dysenteriae	Proteobacteria	Unlikely	neg													neg			(d)	neg				neg
Shigella flexneri	Proteobacteria	Minor	neg													neg			(d)					neg
Shigella sonnei	Proteobacteria	Minor	neg													neg			neg					neg
Shuttleworthia satelles	Firmicutes	Rare	+		+		+					+							+					neg
Silanimonas lenta	Proteobacteria	Non	neg
Skermanella aerolata	Proteobacteria	Unlikely	neg													neg			neg
Slackia equolifaciens	Actinobacteria	Rare	+																neg
Slackia exigua	Actinobacteria	Rare	+													neg			neg		+
Slackia faecicanis	Actinobacteria	Rare	+																neg
Slackia heliotrinireducens	Actinobacteria	Rare	+		+	+	+			trace(+)									neg		+	+	+	neg
Slackia isoflavoniconvertens	Actinobacteria	Rare	+																neg
Slackia piriformis	Actinobacteria	Minor	+																neg
Sneathia sanguinegens	Fusobacteria	Rare	neg	Major(+)	minor(+)							Major(+)			neg	neg			neg
Sneathia vaginalis	Fusobacteria	Rare	neg									+
Sodaliphilus pleomorphus	Bacteroidetes	Rare	neg	+				trace(+)
Soleaferrea massiliensis	Firmicutes	Rare	+
Solibacillus silvestris	Firmicutes	Unlikely	+													neg			neg
Solibaculum mannosilyticum	Firmicutes	Rare	vr		+							+							neg	neg
Solobacterium moorei	Firmicutes	Minor	+		Major(+)		+					+		minor(+)		neg			neg					neg
Sorangium cellulosum	Proteobacteria	Rare	neg																	yellow, orange, brown, black, and colourless
Sphaerotilus natans	Proteobacteria	Unlikely	neg
Sphingobacterium alimentarium	Bacteroidetes	Unlikely	neg													+			neg	bright orange				neg
Sphingobacterium faecium	Bacteroidetes	Rare	neg																neg	+
Sphingobacterium mizutaii	Bacteroidetes	Unlikely	neg													+			+					+
Sphingobacterium multivorum	Bacteroidetes	Rare	neg																neg					d(+)
Sphingobacterium nematocida	Bacteroidetes	Unlikely	neg													+			neg					neg
Sphingobacterium siyangense	Bacteroidetes	Rare	neg													neg			neg					neg
Sphingobacterium spiritivorum	Bacteroidetes	Rare	neg																neg	yellow				neg
Sphingobacterium thalpophilum	Bacteroidetes	Unlikely	neg																neg	yellow				neg
Sphingobium xenophagum	Proteobacteria	Unlikely	neg																	yellow
Sphingomonas adhaesiva	Proteobacteria	Unlikely	neg													neg			neg	yellow				neg
Sphingomonas aerolata	Proteobacteria	Non	neg																neg					neg
Sphingomonas aestuarii	Proteobacteria	Unlikely	neg																neg	yellow
Sphingomonas azotifigens	Proteobacteria	Rare	neg																neg	yellow-orange				neg
Sphingomonas bisphenolicum	Proteobacteria	Unlikely	neg													neg			neg	yellow				neg
Sphingomonas echinoides	Proteobacteria	Unlikely	neg																neg	yellow
Sphingomonas glacialis	Proteobacteria	Unlikely	neg																neg	yellow				neg
Sphingomonas hankookensis	Proteobacteria	Rare	neg																	yellow				neg
Sphingomonas koreensis	Proteobacteria	Unlikely	neg																neg	yellow
Sphingomonas melonis	Proteobacteria	Rare	neg																neg	deep yellow
Sphingomonas panni	Proteobacteria	Rare	neg																neg	yellow
Sphingomonas paucimobilis	Proteobacteria	Rare	neg													neg			neg	dark yellow				vr
Sphingomonas pseudosanguinis	Proteobacteria	Rare	neg																neg	yellow
Sphingomonas sinipercae	Proteobacteria	Unlikely	neg																	pink
Sphingomonas yabuuchiae	Proteobacteria	Rare	neg																	deep yellow
Sphingopyxis bauzanensis	Proteobacteria	Unlikely	neg																neg	yellow				neg
Spiribacter roseus	Proteobacteria	Non	neg																neg	pink
Spirochaeta coccoides	Spirochaetes	Rare	neg	+	+													+		neg
Spirochaeta thermophila	Spirochaetes	Non	neg		+			trace(+)				+							neg			+	+
Spirosoma linguale	Bacteroidetes	Unlikely	neg													neg			neg	light yellow				neg
Sporobacter termitidis	Firmicutes	Rare	+		+
Sporolactobacillus laevolacticus	Firmicutes	Unlikely	+									+				+			neg					neg
Sporolactobacillus nakayamae subsp. racemicus	Firmicutes	Rare	+									+								neg
Sporomusa termitida	Firmicutes	Unlikely	neg		+	+						neg						neg				+	minor(+)
Sporosarcina aquimarina	Firmicutes	Non	+																neg	light orange
Sporosarcina koreensis	Firmicutes	Unlikely	+													neg			neg	light orange
Sporosarcina luteola	Firmicutes	Rare	vr													neg			neg	yellow				neg
Sporosarcina siberiensis	Firmicutes	Unlikely	+													neg			+	light orange				neg
Stackebrandtia nassauensis	Actinobacteria	Unlikely	+																	pale yellow
Staphylococcus arlettae	Firmicutes	Rare	+									minor(+)				neg				yellow, beige
Staphylococcus aureus subsp. aureus	Firmicutes	Minor	+		+											vr				grey, yellow, orange		+
Staphylococcus auricularis	Firmicutes	Rare	+									minor(+)				vr				neg
Staphylococcus capitis subsp. capitis	Firmicutes	Rare	+													vr			neg	yellow, orange
Staphylococcus caprae	Firmicutes	Rare	+									+				+				neg
Staphylococcus carnosus	Firmicutes	Rare	+									+				+
Staphylococcus cohnii subsp. cohnii	Firmicutes	Rare	+									+				d				yellow
Staphylococcus condimenti	Firmicutes	Rare	+													neg				+
Staphylococcus devriesei	Firmicutes	Rare	+													+				yellow-orange
Staphylococcus epidermidis	Firmicutes	Widespread	+		+					+		+				+			neg	neg		+
Staphylococcus equorum subsp. equorum	Firmicutes	Rare	+													neg
Staphylococcus gallinarum	Firmicutes	Rare	+													neg				pale yellow
Staphylococcus haemolyticus	Firmicutes	Minor	+									+				+				variable
Staphylococcus hominis subsp. hominis	Firmicutes	Minor	+									+				vr
Staphylococcus hyicus	Firmicutes	Rare	+									+				neg			neg	neg				neg
Staphylococcus intermedius	Firmicutes	Rare	+									+				+			neg	neg				neg
Staphylococcus kloosii	Firmicutes	Rare	+													d(neg)				variable
Staphylococcus lugdunensis	Firmicutes	Rare	+									+				+				variable
Staphylococcus nepalensis	Firmicutes	Rare	+													neg			neg					neg
Staphylococcus pasteuri	Firmicutes	Minor	+									+				+				variable
Staphylococcus petrasii	Firmicutes	Rare	+													+
Staphylococcus pettenkoferi	Firmicutes	Rare	+													neg				variable
Staphylococcus pseudintermedius	Firmicutes	Rare	+													+				neg
Staphylococcus saccharolyticus	Firmicutes	Rare	+	minor(+)	+							minor(+)				+		+	neg	neg	+	+		neg
Staphylococcus saprophyticus subsp. saprophyticus	Firmicutes	Rare	+									+				vr
Staphylococcus schleiferi subsp. schleiferi	Firmicutes	Rare	+									+				+				neg
Staphylococcus simiae	Firmicutes	Rare	+													neg
Staphylococcus simulans	Firmicutes	Rare	+									+				vr				neg
Staphylococcus succinus subsp. succinus	Firmicutes	Unlikely	+													neg
Staphylococcus warneri	Firmicutes	Minor	+									+				+				variable
Staphylococcus xylosus	Firmicutes	Rare	+									minor(+)				vr				variable
Starkeya novella	Proteobacteria	Unlikely	neg
Stenotrophomonas acidaminiphila	Proteobacteria	Unlikely	neg
Stenotrophomonas bentonitica	Proteobacteria	Unlikely	neg																neg
Stenotrophomonas maltophilia	Proteobacteria	Minor	neg													neg			neg	+	+			neg
Stenotrophomonas rhizophila	Proteobacteria	Rare	neg																neg
Stomatobaculum longum	Firmicutes	Minor	vr		+		+			+		+							neg	neg
Streptobacillus hongkongensis	Fusobacteria	Rare	neg
Streptobacillus moniliformis	Fusobacteria	Unlikely	neg																neg
Streptococcus acidominimus	Firmicutes	Unlikely	+													neg
Streptococcus agalactiae	Firmicutes	Minor	+									+				vr			neg
Streptococcus alactolyticus	Firmicutes	Rare	+									+				+			neg
Streptococcus anginosus	Firmicutes	Widespread	+									+				+			neg
Streptococcus anginosus subsp. whileyi	Firmicutes	Rare	+									+				+			neg
Streptococcus australis	Firmicutes	Minor	+									+				neg			neg
Streptococcus caballi	Firmicutes	Rare	+		+							+				+			neg
Streptococcus canis	Firmicutes	Unlikely	+													neg
Streptococcus castoreus	Firmicutes	Rare	+									+				neg			neg
Streptococcus constellatus subsp. constellatus	Firmicutes	Minor	+	+	+							Major(+)		minor(+)	minor(+)	neg			neg		+			neg
Streptococcus cristatus	Firmicutes	Minor	+									+				neg			neg
Streptococcus danieliae	Firmicutes	Rare	+									+				neg			neg
Streptococcus didelphis	Firmicutes	Rare	+									+				neg			neg
Streptococcus downei	Firmicutes	Rare	+									+				+			neg
Streptococcus dysgalactiae	Firmicutes	Rare	+									+				neg			neg
Streptococcus dysgalactiae subsp. equisimilis	Firmicutes	Unlikely	+													neg
Streptococcus equi subsp. equi	Firmicutes	Rare	+									+				neg			neg
Streptococcus equinus	Firmicutes	Moderate	+									+				+			neg	neg
Streptococcus ferus	Firmicutes	Rare	+									+				d(+)			neg
Streptococcus gallolyticus subsp. gallolyticus	Firmicutes	Minor	+									+				+			neg	neg
Streptococcus gordonii	Firmicutes	Minor	+									+				neg			neg
Streptococcus gwangjuense	Firmicutes	Unlikely	+													neg
Streptococcus henryi	Firmicutes	Rare	+									+				neg			neg
Streptococcus hyovaginalis	Firmicutes	Rare	+									+				+			neg	neg
Streptococcus ilei	Firmicutes	Unlikely	+
Streptococcus infantarius	Firmicutes	Minor	+									+				+			neg	neg
Streptococcus infantarius subsp. infantarius	Firmicutes	Minor	+									+				+			neg	neg
Streptococcus infantis	Firmicutes	Minor	+									+				neg			neg
Streptococcus intermedius	Firmicutes	Moderate	+									+				d(neg)			neg				neg	neg
Streptococcus koreensis	Firmicutes	Unlikely	+													neg
Streptococcus lactarius	Firmicutes	Rare	+													neg				neg
Streptococcus lutetiensis	Firmicutes	Minor	+									+				+			neg	neg
Streptococcus macedonicus	Firmicutes	Rare	+													+				neg
Streptococcus merionis	Firmicutes	Rare	+									+							neg
Streptococcus mitis	Firmicutes	Moderate	+		+							+				neg			neg
Streptococcus mutans	Firmicutes	Moderate	+									+				+			neg
Streptococcus oralis	Firmicutes	Minor	+									+				neg			neg
Streptococcus oralis subsp. tigurinus	Firmicutes	Rare	+									+				neg			neg
Streptococcus orisratti	Firmicutes	Rare	+													neg
Streptococcus ovis	Firmicutes	Rare	+									+				neg			neg
Streptococcus pantholopis	Firmicutes	Rare	+									+				+			neg
Streptococcus parasanguinis	Firmicutes	Widespread	+									+				neg			neg
Streptococcus parasuis	Firmicutes	Rare	+									+				neg			neg
Streptococcus parauberis	Firmicutes	Rare	+									+				+			neg
Streptococcus pasteurianus	Firmicutes	Minor	+									+				+			neg	neg
Streptococcus periodonticum	Firmicutes	Unlikely	+													+
Streptococcus peroris	Firmicutes	Rare	+									+				neg			neg
Streptococcus pluranimalium	Firmicutes	Unlikely	+													neg
Streptococcus plurextorum	Firmicutes	Rare	+									+				neg			neg	neg
Streptococcus pneumoniae	Firmicutes	Minor	+	+	+											neg			neg
Streptococcus porci	Firmicutes	Rare	+									+				neg			neg	neg
Streptococcus pseudopneumoniae	Firmicutes	Minor	+									+				neg			neg
Streptococcus pseudoporcinus	Firmicutes	Rare	+									+				d			neg
Streptococcus pyogenes	Firmicutes	Minor	+									+				neg			neg
Streptococcus rubneri	Firmicutes	Rare	+									+				neg			neg
Streptococcus salivarius	Firmicutes	Widespread	+									+				+			neg
Streptococcus sanguinis	Firmicutes	Moderate	+									+				neg			neg
Streptococcus sinensis	Firmicutes	Rare	+									+				+			neg
Streptococcus sobrinus	Firmicutes	Minor	+									+				+			neg
Streptococcus suis	Firmicutes	Rare	+									+				neg			neg
Streptococcus thermophilus	Firmicutes	Widespread	+									+				+			neg
Streptococcus thoraltensis	Firmicutes	Rare	+									+				+			neg
Streptococcus timonensis	Firmicutes	Minor	+									+				neg			neg
Streptococcus uberis	Firmicutes	Rare	+									+				+			neg
Streptococcus vestibularis	Firmicutes	Moderate	+									+				+			neg
Streptococcus viridans	Firmicutes	Rare	+									+							neg
Streptomyces albus	Actinobacteria	Unlikely	+
Streptomyces flavogriseus	Actinobacteria	Unlikely	+																	grey-yellow-orange
Streptomyces hygroscopicus	Actinobacteria	Unlikely	+																	grey-yellow-brown
Streptomyces koyangensis	Actinobacteria	Rare	+																					+
Streptomyces lividans	Actinobacteria	Unlikely	+																	grey-red
Streptomyces massiliensis	Actinobacteria	Unlikely	+
Streptomyces misionensis	Actinobacteria	Rare	+
Streptomyces specialis	Actinobacteria	Unlikely	+
Streptomyces thermoviolaceus	Actinobacteria	Rare	+													neg			neg					neg
Streptomyces thermovulgaris	Actinobacteria	Unlikely	+													+			neg					neg
Streptomyces violaceusniger	Actinobacteria	Unlikely	+																	grey-yellow-green
Streptosporangium roseum	Actinobacteria	Unlikely	+																	pink-purple-brown
Subdoligranulum formicile	Firmicutes	Rare	neg		minor(+)		+					+			minor(+)				neg
Subdoligranulum variabile	Firmicutes	Moderate	neg		minor(+)		+					+			minor(+)				neg
Succinatimonas hippei	Proteobacteria	Minor	neg		+										Major(+)				neg
Succinivibrio dextrinosolvens	Proteobacteria	Rare	neg	+	+							neg			Major(+)	neg			neg					neg
Sulfurospirillum deleyianum	Proteobacteria	Rare	neg												+					yellow				+
Sutcliffiella cohnii	Firmicutes	Unlikely	+													neg
Sutterella faecalis	Proteobacteria	Rare	neg																neg
Sutterella massiliensis	Proteobacteria	Rare	neg
Sutterella megalosphaeroides	Proteobacteria	Rare	neg																neg	neg
Sutterella parvirubra	Proteobacteria	Minor	neg																neg
Sutterella seckii	Proteobacteria	Rare	neg
Sutterella stercoricanis	Proteobacteria	Rare	neg																neg
Sutterella timonensis	Proteobacteria	Rare	neg
Sutterella wadsworthensis	Proteobacteria	Widespread	neg													neg			neg
Symbiobacterium thermophilum	Firmicutes	Unlikely	neg																+
Symbiobacterium toebii	Firmicutes	Unlikely	neg
Syntrophobotulus glycolicus	Firmicutes	Unlikely	neg																			+	+
Syntrophococcus sucromutans	Firmicutes	Rare	neg		+
Syntrophomonas zehnderi	Firmicutes	Rare	vr		+	+
Tannerella forsythia	Bacteroidetes	Minor	neg		+	+	+	minor(+)		+					minor(+)
Tannerella serpentiformis	Bacteroidetes	Unlikely	neg																+
Taonella mepensis	Proteobacteria	Unlikely	neg																neg					neg
Tatumella ptyseos	Proteobacteria	Rare	neg													+			neg	neg				neg
Tepidanaerobacter acetatoxydans	Firmicutes	Rare	vr		+	+																+
Tepiditoga spiralis	Thermotogae	Unlikely	neg																					+
Terrahaemophilus aromaticivorans	Proteobacteria	Rare	neg
Terribacillus aidingensis	Firmicutes	Rare	+													neg			neg					neg
Terribacillus halophilus	Firmicutes	Unlikely	+													+			neg					neg
Terrisporobacter glycolicus	Firmicutes	Minor	+		+		neg	+		+								+	neg
Terrisporobacter mayombei	Firmicutes	Rare	+		+	+		+														+	+	neg
Terrisporobacter othiniensis	Firmicutes	Rare	+
Terrisporobacter petrolearius	Firmicutes	Rare	+		+														neg			+		neg
Tessaracoccus massiliensis	Actinobacteria	Rare	+																neg
Tetragenococcus halophilus	Firmicutes	Unlikely	+									+
Tetragenococcus koreensis	Firmicutes	Rare	+									+
Tetragenococcus solitarius	Firmicutes	Rare	+									+				vr				neg
Thalassobacillus devorans	Firmicutes	Non	+													neg			neg
Thauera terpenica	Proteobacteria	Rare	neg
Thermaerobacter marianensis	Firmicutes	Non	vr
Thermoanaerobacterium thermosaccharolyticum	Firmicutes	Rare	neg		+		+					+			+			+					+	+
Thermobacillus composti	Firmicutes	Unlikely	neg
Thermobispora bispora	Actinobacteria	Unlikely	+
Thermoclostridium stercorarium	Firmicutes	Unlikely	neg		+							+				neg		+						neg
Thermolithobacter ferrireducens	Firmicutes	Non	+
Thermomonas carbonis	Proteobacteria	Unlikely	neg																neg	yellow				neg
Thermomonospora curvata	Actinobacteria	Unlikely	+																	yellow-orange
Thermophilibacter immobilis	Actinobacteria	Unlikely	+		+							+
Thermophilibacter mediterraneus	Actinobacteria	Rare	+
Thermophilibacter provencensis	Actinobacteria	Minor	+
Thermus scotoductus	Deinococcus-Thermus	Unlikely	neg																	tan
Thiomonas islandica	Proteobacteria	Unlikely	neg
Thomasclavelia saccharogumia	Firmicutes	Rare	+		minor(+)		+												neg
Thomasclavelia spiroformis	Firmicutes	Moderate	+	+	+							+			minor(+)	+		minor	neg				+
Tidjanibacter inops	Bacteroidetes	Moderate
Tidjanibacter massiliensis	Bacteroidetes	Rare	neg
Timonella senegalensis	Actinobacteria	Rare	+																+
Tissierella praeacuta	Firmicutes	Rare	+		+		+			+									neg					+
Trabulsiella guamensis	Proteobacteria	Rare	neg													neg			vr	neg				+
Tractidigestivibacter scatoligenes	Actinobacteria	Rare	+	minor(+)	minor(+)							Major(+)				neg			neg				neg
Traorella massiliensis	Firmicutes	Rare	neg
Treponema berlinense	Spirochaetes	Rare	neg																neg
Treponema brennaborense	Spirochaetes	Unlikely	neg
Treponema denticola	Spirochaetes	Rare	neg	minor(+)	+							minor(+)			minor(+)						+
Treponema medium	Spirochaetes	Unlikely	neg		+		+		trace(+)										neg		+
Treponema parvum	Spirochaetes	Unlikely	neg
Treponema pectinovorum	Spirochaetes	Rare	neg	+	+							trace(+)		trace(+)		neg			neg					neg
Treponema pedis	Spirochaetes	Unlikely	neg
Treponema peruense	Spirochaetes	Rare	neg	+	+							+			+					neg
Treponema phagedenis	Spirochaetes	Unlikely	neg																+
Treponema primitia	Spirochaetes	Unlikely	neg		+
Treponema ruminis	Spirochaetes	Unlikely	neg
Treponema socranskii	Spirochaetes	Unlikely	neg	trace(+)	+							+			+	neg			neg					+
Treponema succinifaciens	Spirochaetes	Rare	neg	+	+							+		minor(+)	+
Treponema vincentii	Spirochaetes	Rare	neg	minor(+)	+		+					+			minor(+)				w		+
Tropheryma whipplei	Actinobacteria	Unlikely	neg
Trueperella bernardiae	Actinobacteria	Rare	+													neg			neg
Trueperella pyogenes	Actinobacteria	Rare	+	+	+							Major(+)			+	neg			neg
Tsukamurella pulmonis	Actinobacteria	Unlikely	+
Tumebacillus avium	Firmicutes	Unlikely	+													neg			+
Tumebacillus permanentifrigoris	Firmicutes	Unlikely	+																	yellow
Turicibacter sanguinis	Firmicutes	Moderate	+		minor(+)							+							neg
Turicimonas muris	Proteobacteria	Rare	neg																neg
Tyzzerella nexilis	Firmicutes	Widespread	+	+	+							minor(+)			minor(+)			+	neg				+	vr
Ureaplasma parvum	Tenericutes	Rare	unk
Ureaplasma urealyticum	Tenericutes	Rare	unk
Ureibacillus massiliensis	Firmicutes	Rare	neg													+			neg					neg
Ureibacillus suwonensis	Firmicutes	Unlikely	neg													neg			neg
Ureibacillus thermosphaericus	Firmicutes	Non	neg													neg			neg
Urinicoccus timonensis	Firmicutes	Rare	+
Urmitella timonensis	Firmicutes	Rare	+
Uruburuella suis	Proteobacteria	Rare	neg																neg	yellow
Vaginimicrobium propionicum	Actinobacteria	Unlikely	+		+	+		+											neg
Vagococcus carniphilus	Firmicutes	Rare	+													neg
Vagococcus fluvialis	Firmicutes	Rare	+									+				neg
Vagococcus lutrae	Firmicutes	Rare	+													neg
Vagococcus penaei	Firmicutes	Rare	+									+				+
Vagococcus teuberi	Firmicutes	Rare	+													neg
Vampirovibrio chlorellavorus	Cyanobacteria	Unlikely	neg
Varibaculum cambriense	Actinobacteria	Rare	+		minor(+)							+			+	neg			neg
Varibaculum timonense	Actinobacteria	Rare	+
Variovorax boronicumulans	Proteobacteria	Rare	neg													+			neg					neg
Variovorax ginsengisoli	Proteobacteria	Unlikely	neg																neg
Variovorax paradoxus	Proteobacteria	Unlikely	neg																	yellow
Veillonella atypica	Firmicutes	Widespread	neg													neg			neg
Veillonella denticariosi	Firmicutes	Rare	neg		+	+													neg
Veillonella dispar	Firmicutes	Moderate	neg																neg
Veillonella infantium	Firmicutes	Rare	neg		+	+													neg
Veillonella magna	Firmicutes	Rare	neg		+	+																		+
Veillonella montpellierensis	Firmicutes	Rare	neg		+	+													neg
Veillonella nakazawae	Firmicutes	Rare	neg		+	+													neg
Veillonella parvula	Firmicutes	Widespread	neg			+										neg			neg
Veillonella ratti	Firmicutes	Rare	neg																neg
Veillonella rodentium	Firmicutes	Unlikely	neg		+	+													neg					+
Veillonella rogosae	Firmicutes	Minor	neg		+	+													neg
Veillonella tobetsuensis	Firmicutes	Minor	neg		+	+													neg
Vescimonas coprocola	Firmicutes	Rare	neg
Vescimonas fastidiosa	Firmicutes	Rare	neg
Vibrio alginolyticus	Proteobacteria	Rare	neg													+			d(+)					neg
Vibrio cholerae	Proteobacteria	Unlikely	neg													+			+					neg
Vibrio cincinnatiensis	Proteobacteria	Rare	neg													neg			neg					neg
Vibrio fluvialis	Proteobacteria	Rare	neg													neg			(d)					neg
Vibrio furnissii	Proteobacteria	Rare	neg													neg			neg					neg
Vibrio metoecus	Proteobacteria	Rare	neg													neg			+
Vibrio metschnikovii	Proteobacteria	Rare	neg													+			neg					neg
Vibrio mimicus	Proteobacteria	Rare	neg													neg			+					neg
Vibrio natriegens	Proteobacteria	Rare	neg		+							+		+		d(neg)			neg		+	+
Vibrio neptunius	Proteobacteria	Unlikely	neg													+			+	yellow				neg
Vibrio parahaemolyticus	Proteobacteria	Rare	neg													neg			+					neg
Vibrio proteolyticus	Proteobacteria	Rare	neg													neg			+
Vibrio rumoiensis	Proteobacteria	Unlikely	neg													neg			neg					neg
Vibrio vulnificus	Proteobacteria	Rare	neg													neg			(d)	green
Victivallis vadensis	Lentisphaerae	Minor	neg		+													+				+	+
Virgibacillus dakarensis	Firmicutes	Rare	+													neg			neg
Virgibacillus dokdonensis	Firmicutes	Rare	vr													neg			neg					neg
Virgibacillus doumboii	Firmicutes	Rare	+
Virgibacillus halodenitrificans	Firmicutes	Rare	vr													neg			neg					neg
Virgibacillus ihumii	Firmicutes	Rare	+
Virgibacillus massiliensis	Firmicutes	Rare	+													neg			neg
Virgibacillus ndiopensis	Firmicutes	Rare	+													neg			neg
Virgibacillus pantothenticus	Firmicutes	Rare	+													neg			neg					neg
Virgibacillus profundi	Firmicutes	Unlikely	vr													neg			neg					+
Virgibacillus proomii	Firmicutes	Rare	+													neg			neg					neg
Virgibacillus salexigens	Firmicutes	Unlikely	+													neg			neg	neg				+
Virgibacillus senegalensis	Firmicutes	Non	+													neg			neg
Virgibacillus siamensis	Firmicutes	Unlikely	+													neg			neg	red				neg
Vitreoscilla massiliensis	Proteobacteria	Rare	neg
Vitreoscilla stercoraria	Proteobacteria	Rare	neg
Weeksella virosa	Firmicutes	Rare	neg																+	neg				neg
Weissella cibaria	Firmicutes	Minor	+									+				+			neg
Weissella confusa	Firmicutes	Minor	+													+			neg		+
Weissella paramesenteroides	Firmicutes	Minor	+									+
Weissella viridescens	Firmicutes	Minor	+		+							+						+				+
Weizmannia coagulans	Firmicutes	Rare	+									+				d			neg					neg
Winkia neuii	Actinobacteria	Rare	+
Wolinella succinogenes	Proteobacteria	Rare	neg												+	neg			neg		neg	+	+	+
Xanthomonas massiliensis	Proteobacteria	Unlikely	neg																	green
Xylanimonas cellulosilytica	Actinobacteria	Rare	+													+			neg
Yangia pacifica	Proteobacteria	Non	neg													neg			neg
Yersinia aldovae	Proteobacteria	Rare	neg													+			neg					neg
Yersinia aleksiciae	Proteobacteria	Rare	neg													neg			neg					neg
Yersinia alsatica	Proteobacteria	Rare	neg													+			+					neg
Yersinia artesiana	Proteobacteria	Rare	neg													+			+					neg
Yersinia bercovieri	Proteobacteria	Rare	neg													neg			neg					neg
Yersinia enterocolitica subsp. enterocolitica	Proteobacteria	Unlikely	neg													+			d(neg)					neg
Yersinia frederiksenii	Proteobacteria	Rare	neg													+			+					neg
Yersinia intermedia	Proteobacteria	Rare	neg													+			+					neg
Yersinia kristensenii subsp. kristensenii	Proteobacteria	Rare	neg													neg			(d)					neg
Yersinia kristensenii subsp. rochesterensis	Proteobacteria	Rare	neg													neg			+					neg
Yersinia massiliensis	Proteobacteria	Rare	neg													neg			+					neg
Yersinia mollaretii	Proteobacteria	Rare	neg													neg			neg	neg				neg
Yersinia occitanica	Proteobacteria	Rare	neg																d(+)
Yersinia pestis	Proteobacteria	Non	neg													neg			neg	neg				neg
Yersinia proxima	Proteobacteria	Rare	neg													+			+					neg
Yersinia pseudotuberculosis	Proteobacteria	Unlikely	neg													neg			neg					neg
Yersinia rohdei	Proteobacteria	Rare	neg													neg			neg					neg
Yersinia vastinensis	Proteobacteria	Rare	neg													+			+					neg
Yokenella regensburgei	Proteobacteria	Rare	neg													neg			neg	neg				neg
Yonghaparkia alkaliphila	Actinobacteria	Non	+
Zunongwangia profunda	Bacteroidetes	Non	neg													neg			neg	yellow				neg

Click on table headings to sort. Table abbreviations: Form - formate; Acet - acetate; Prop - propionate; But - butyrate; IBA - isobutyrate; Val - valerate; IVA - isovalerate; Citr - citrate; Islc - isolactate; Lact - lactate; Mala - malate; Pyru - pyruvate; Succ - succinate; Biot - biotin; Cobm - cobalamin; Folt - folate; Ribo - riboflavin; VitK - vitamin K; Actn - acetoin; BuOH - butanol; EtOH - ethanol; Indl - indole; Pigm - pigment; NH3 - ammonia; CO2 - carbon dioxide; H2 - hydrogen; H2S - hydrogen sulfide;

BACTERIA TABLES

INFORMATION