Pu•biome

FILTERS

Coloniser

Gram Stain

Oxygen tolerance

Total 2651

Current 2651

Bacteria	Phylum	Coloniser	Gram	Glc	Arbt	EtOH	Glct	2KG	5KG	MαGl	MβGl	MDM	MDX	NAGA	Sali	Muca	Pyru
Abiotrophia defectiva	Firmicutes	Minor	+	+	neg		neg	neg	neg	neg	neg	neg	neg	neg	neg
Absiella argi	Firmicutes	Rare	+	+											neg
Absiella innocuum	Firmicutes	Moderate
Absiella tortuosum	Firmicutes	Rare	+	+											w
Acetanaerobacterium elongatum	Firmicutes	Rare	+	+											+
Acetatifactor muris	Firmicutes	Rare	+	neg
Acetitomaculum ruminis	Firmicutes	Rare	+
Acetivibrio cellulolyticus	Firmicutes	Rare	neg	neg
Acetivibrio clariflavus	Firmicutes	Unlikely	vr
Acetivibrio ethanolgignens	Firmicutes	Minor	neg	+											+		+
Acetivibrio saccincola	Firmicutes	Unlikely	+
Acetivibrio thermocellus	Firmicutes	Unlikely	neg	neg
Acetoanaerobium sticklandii	Firmicutes	Rare	+	w											neg
Acetobacter pasteurianus	Proteobacteria	Unlikely	neg	d		+
Acetobacterium woodii	Firmicutes	Rare	+
Acetomicrobium hydrogeniformans	Synergistetes	Unlikely	neg
Achromobacter denitrificans	Proteobacteria	Unlikely	neg	neg					neg					neg
Achromobacter insuavis	Proteobacteria	Unlikely	neg	neg
Achromobacter spanius	Proteobacteria	Unlikely	neg	neg
Achromobacter xylosoxidans	Proteobacteria	Rare	neg	+					neg
Acidaminococcus fermentans	Firmicutes	Widespread	neg	d(w)						neg		neg			neg
Acidaminococcus intestini	Firmicutes	Moderate	neg	neg
Acidaminococcus massiliensis	Firmicutes	Rare	neg
Acidaminococcus provencensis	Firmicutes	Rare	neg	neg	neg		neg	neg	+	neg		neg	neg	neg	neg
Acidaminococcus timonensis	Firmicutes	Rare	neg
Acidipropionibacterium acidipropionici	Actinobacteria	Rare	+	+	+		+			+		neg		+
Acidipropionibacterium jensenii	Actinobacteria	Rare	+	+	neg		vr			vr		neg		d(neg)	d(w)
Acidisarcina polymorpha	Acidobacteria	Rare	neg
Acidovorax facilis	Proteobacteria	Rare	neg	neg
Acidovorax sp. strain KKS102	Proteobacteria	Rare	neg
Acidovorax temperans	Proteobacteria	Rare	neg	neg
Acidovorax wautersii	Proteobacteria	Rare	neg	+
Acinetobacter baumannii	Proteobacteria	Unlikely	neg	+
Acinetobacter bereziniae	Proteobacteria	Unlikely	neg	d(+)
Acinetobacter calcoaceticus	Proteobacteria	Rare	neg	+					neg
Acinetobacter guillouiae	Proteobacteria	Rare	neg	neg
Acinetobacter haemolyticus	Proteobacteria	Unlikely	neg	d
Acinetobacter idrijaensis	Proteobacteria	Rare
Acinetobacter johnsonii	Proteobacteria	Rare	neg	neg					neg
Acinetobacter junii	Proteobacteria	Rare	neg	neg
Acinetobacter lwoffii	Proteobacteria	Unlikely	neg	d(neg)
Acinetobacter parvus	Proteobacteria	Unlikely	neg	neg
Acinetobacter pittii	Proteobacteria	Unlikely	neg	+					neg
Acinetobacter radioresistens	Proteobacteria	Rare	neg	neg
Acinetobacter schindleri	Proteobacteria	Unlikely	neg	neg
Acinetobacter septicus	Proteobacteria	Unlikely	neg	neg
Acinetobacter towneri	Proteobacteria	Unlikely	neg	neg									neg		neg
Acinetobacter ursingii	Proteobacteria	Unlikely	neg	neg
Acinetobacter variabilis	Proteobacteria	Unlikely	neg	neg
Actinobacillus capsulatus	Proteobacteria	Rare	neg	+	+										+	neg
Actinobacillus minor	Proteobacteria	Unlikely	neg	+
Actinobacillus pleuropneumoniae	Proteobacteria	Rare	neg	+											neg
Actinobacillus succinogenes	Proteobacteria	Rare	neg	+	+		+	neg	+	neg		neg	neg	neg	+
Actinobacillus ureae	Proteobacteria	Non	neg	+											neg
Actinobaculum massiliense	Actinobacteria	Minor	+	+
Actinomyces bouchesdurhonensis	Actinobacteria	Unlikely	+	+
Actinomyces canis	Actinobacteria	Non	+	d						neg	neg
Actinomyces dentalis	Actinobacteria	Non	+	+						neg
Actinomyces georgiae	Actinobacteria	Non	+	+											neg
Actinomyces gerencseriae	Actinobacteria	Unlikely	+	+											d(+)
Actinomyces graevenitzii	Actinobacteria	Minor	+	+					+	neg	neg		neg	+	neg
Actinomyces ihuae	Actinobacteria	Rare	+	neg
Actinomyces israelii	Actinobacteria	Non	+
Actinomyces johnsonii	Actinobacteria	Rare	+												neg
Actinomyces marseillensis	Actinobacteria	Rare	+	+
Actinomyces massiliensis	Actinobacteria	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Actinomyces mediterranea	Actinobacteria	Rare	+
Actinomyces minihominis	Actinobacteria	Rare	+
Actinomyces naeslundii	Actinobacteria	Minor	+	+							vr				d
Actinomyces oris	Actinobacteria	Rare	+	+							neg				d(neg)
Actinomyces pacaensis	Actinobacteria	Rare	+
Actinomyces polynesiensis	Actinobacteria	Rare	+	+			neg			+			neg	+	+
Actinomyces provencensis	Actinobacteria	Rare	+
Actinomyces sp. ph3	Actinobacteria	Rare	+
Actinomyces timonensis	Actinobacteria	Rare	+	+	vr			neg	neg	neg		neg	neg	+	+
Actinomyces urogenitalis	Actinobacteria	Rare	+	+							vr
Actinomyces viscosus	Actinobacteria	Minor	+	+							vr
Actinosynnema mirum	Actinobacteria	Non	+	+						neg		neg
Actinotignum schaalii	Actinobacteria	Rare	+	+
Acutalibacter muris	Firmicutes	Rare	+
Acutalibacter timonensis	Firmicutes	Minor
Adhaeribacter aquaticus	Bacteroidetes	Unlikely	neg	neg
Adlercreutzia caecimuris	Actinobacteria	Rare	+
Adlercreutzia equolifaciens	Actinobacteria	Moderate	+
Adlercreutzia equolifaciens subsp. celatus	Actinobacteria	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Adlercreutzia hattorii	Actinobacteria	Rare	+
Adlercreutzia mucosicola	Actinobacteria	Rare	+
Adlercreutzia rubneri	Actinobacteria	Rare	+
Aeribacillus pallidus	Firmicutes	Unlikely	+	+	+					+				+
Aerococcus vaginalis	Firmicutes	Non	+	+	neg		neg	neg	neg	neg		neg	neg	+	neg
Aerococcus viridans	Firmicutes	Rare	+	+	neg		neg	neg	neg	+	vr	neg	neg	+	neg
Aeromicrobium massiliense	Actinobacteria	Rare	+	neg
Aeromicrobium tamlense	Actinobacteria	Rare	+
Aeromonas allosaccharophila	Proteobacteria	Rare	neg	+	neg										neg
Aeromonas bestiarum	Proteobacteria	Rare	neg	+					neg	d					d(+)
Aeromonas caviae	Proteobacteria	Unlikely	neg	+					neg						+
Aeromonas dhakensis	Proteobacteria	Rare	neg	+	+		+	neg	neg	+		neg	neg	+	+
Aeromonas encheleia	Proteobacteria	Unlikely	neg	+						neg					+
Aeromonas enteropelogenes	Proteobacteria	Rare	neg	+					neg
Aeromonas eucrenophila	Proteobacteria	Non	neg	+											+
Aeromonas hydrophila	Proteobacteria	Unlikely	neg	+					neg						+
Aeromonas hydrophila subsp. hydrophila	Proteobacteria	Unlikely	neg	+											+
Aeromonas jandaei	Proteobacteria	Rare	neg	+	neg				neg						neg
Aeromonas media	Proteobacteria	Rare	neg	+					neg
Aeromonas popoffii	Proteobacteria	Unlikely	neg	+						+					neg
Aeromonas salmonicida	Proteobacteria	Unlikely	neg	+	d					d					d
Aeromonas schubertii	Proteobacteria	Non	neg	+						neg					neg	neg
Aeromonas sobria	Proteobacteria	Rare	neg												neg	neg
Aeromonas taiwanensis	Proteobacteria	Non	neg	+						neg		neg	neg	+	+
Aeromonas tecta	Proteobacteria	Rare	neg	+	+		+			neg				+	d(+)
Aeromonas trota	Proteobacteria	Rare	neg	+			neg								neg
Aeromonas veronii	Proteobacteria	Rare	neg	+					neg	+					+
Aestuariimicrobium kwangyangense	Actinobacteria	Rare	+	+
Afipia birgiae	Proteobacteria	Unlikely	neg	neg
Afipia broomeae	Proteobacteria	Rare	neg	neg
Afipia lausannensis	Proteobacteria	Unlikely	neg	neg
Africanella massiliensis	Firmicutes	Rare	+
Agathobacter ruminis	Firmicutes	Rare	+	+	+		neg			neg		neg	neg	neg	neg
Agathobaculum butyriciproducens	Firmicutes	Moderate	+	+											+
Agathobaculum desmolans	Firmicutes	Minor	+	neg											neg
Aggregatibacter actinomycetemcomitans	Proteobacteria	Rare	neg	+											neg
Aggregatibacter aphrophilus	Proteobacteria	Minor	neg	+							neg				neg
Aggregatibacter segnis	Proteobacteria	Minor	neg	w(+)											neg
Agrilactobacillus composti	Firmicutes	Unlikely	+	+			w								w
Agrobacterium radiobacter	Proteobacteria	Unlikely	neg	+						+					+
Agrobacterium rhizogenes	Proteobacteria	Unlikely	neg	+						+
Agrobacterium tumefaciens	Proteobacteria	Unlikely	neg
Agrococcus casei	Actinobacteria	Rare	+	+
Agrococcus jejuensis	Actinobacteria	Rare	+	neg						neg		neg
Agrococcus jenensis	Actinobacteria	Rare	+	neg											neg
Agrococcus terreus	Actinobacteria	Unlikely	+	+											w
Akkermansia glycaniphila	Verrucomicrobia	Rare	neg
Akkermansia muciniphila	Verrucomicrobia	Widespread	neg	+											neg
Alcaligenes faecalis	Proteobacteria	Rare	neg	neg					neg
Alcaligenes faecalis subsp. faecalis	Proteobacteria	Unlikely	neg	neg					neg
Aliagarivorans marinus	Proteobacteria	Rare	neg	+
Aliarcobacter butzleri	Proteobacteria	Rare	neg	neg
Aliarcobacter cryaerophilus	Proteobacteria	Rare	neg	neg
Aliarcobacter skirrowii	Proteobacteria	Rare	neg	neg
Alicyclobacillus acidocaldarius	Firmicutes	Rare	+	+			+	neg						neg
Aliiruegeria sabulilitoris	Proteobacteria	Unlikely	neg	+
Alistipes communis	Bacteroidetes	Rare	neg	+											neg
Alistipes dispar	Bacteroidetes	Rare	neg	+											vr
Alistipes finegoldii	Bacteroidetes	Moderate	neg	+											+
Alistipes ihumii	Bacteroidetes	Moderate	neg
Alistipes indistinctus	Bacteroidetes	Moderate	neg	+											+
Alistipes inops	Bacteroidetes	Rare	neg
Alistipes marseilloanorexicus	Bacteroidetes	Rare	neg
Alistipes massiliensis	Bacteroidetes	Rare	neg
Alistipes megaguti	Bacteroidetes	Rare	neg	+	+		neg	neg	w	neg		neg	neg	+	+
Alistipes montrealensis	Bacteroidetes	Rare	neg	+
Alistipes obesi	Bacteroidetes	Moderate	neg
Alistipes onderdonkii	Bacteroidetes	Moderate	neg
Alistipes onderdonkii subsp. vulgaris	Bacteroidetes	Rare	neg	+											vr
Alistipes provencensis	Bacteroidetes	Rare	neg	+	neg		neg	neg	w	neg		w	neg	neg	neg
Alistipes putredinis	Bacteroidetes	Widespread	neg
Alistipes senegalensis	Bacteroidetes	Moderate	neg
Alistipes shahii	Bacteroidetes	Widespread	neg
Alistipes timonensis	Bacteroidetes	Moderate	neg
Alkalibacillus halophilus	Firmicutes	Unlikely	+
Alkalihalobacillus alcalophilus	Firmicutes	Unlikely	+
Alkalihalobacillus gibsonii	Firmicutes	Rare	+
Alkalihalobacillus halodurans	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Alkalihalobacillus oshimensis	Firmicutes	Unlikely	+	+
Alkaliphilus metalliredigens	Firmicutes	Rare	+
Alkaliphilus oremlandii	Firmicutes	Non	+
Alkaliphilus transvaalensis	Firmicutes	Non	+
Alkanindiges illinoisensis	Proteobacteria	Non	vr
Allisonella histaminiformans	Firmicutes	Minor	neg
Allobaculum fili	Firmicutes	Rare	+
Allobaculum mucilyticum	Firmicutes	Rare	+
Alloprevotella rava	Bacteroidetes	Rare	neg	+											neg
Alloprevotella tannerae	Bacteroidetes	Minor	neg	+											neg
Alloscardovia omnicolens	Actinobacteria	Minor	+	+											+
Alteracholeplasma palmae	Tenericutes	Rare	unk	+
Alterileibacterium massiliense	Firmicutes	Rare	neg
Amaricoccus kaplicensis	Proteobacteria	Unlikely	neg	+
Amedibacillus dolichus	Firmicutes	Minor	+	neg											neg
Amedibacterium intestinale	Firmicutes	Rare	+	+											+
Aminipila butyrica	Firmicutes	Rare	+
Aminipila terrae	Firmicutes	Rare	+	+
Aminomonas paucivorans	Synergistetes	Rare	neg
Ammonifex degensii	Firmicutes	Non	neg
Amycolatopsis alba	Actinobacteria	Rare	+	+		neg				+					+
Amycolatopsis mediterranei	Actinobacteria	Rare	+	+						neg			neg		+
Amycolatopsis thailandensis	Actinobacteria	Rare	+	+
Amycolatopsis vancoresmycina	Actinobacteria	Unlikely	+
Anaerobiospirillum succiniciproducens	Proteobacteria	Rare	neg	+											neg
Anaerobiospirillum thomasii	Proteobacteria	Rare	neg	+											neg
Anaerobutyricum hallii	Firmicutes	Widespread	+	w											neg
Anaerobutyricum soehngenii	Firmicutes	Rare	+	+
Anaerococcus hydrogenalis	Firmicutes	Rare	+	+							neg
Anaerococcus jeddahensis	Firmicutes	Rare	+
Anaerococcus lactolyticus	Firmicutes	Rare	+	+
Anaerococcus marasmi	Firmicutes	Rare	+	+	neg		neg	+	+	neg		neg	neg	+	+
Anaerococcus mediterraneensis	Firmicutes	Rare	+
Anaerococcus murdochii	Firmicutes	Rare	+	+
Anaerococcus obesiensis	Firmicutes	Rare	+
Anaerococcus octavius	Firmicutes	Rare	+	+							neg
Anaerococcus prevotii	Firmicutes	Minor	+	d(+)
Anaerococcus provencensis	Firmicutes	Rare	+
Anaerococcus rubeinfantis	Firmicutes	Rare	+	+	neg		neg	neg	+	neg		neg	neg
Anaerococcus senegalensis	Firmicutes	Rare	+
Anaerococcus tetradius	Firmicutes	Rare	+	d(+)
Anaerococcus vaginalis	Firmicutes	Minor	+	+
Anaerocolumna aminovalerica	Firmicutes	Rare	+
Anaerocolumna cellulosilytica	Firmicutes	Rare	+
Anaerocolumna chitinilytica	Firmicutes	Rare	+
Anaerocolumna sedimenticola	Firmicutes	Rare	+	+											+
Anaerocolumna xylanovorans	Firmicutes	Rare	+
Anaerofilum pentosovorans	Firmicutes	Rare	+
Anaerofustis stercorihominis	Firmicutes	Minor	+												neg
Anaeroglobus geminatus	Firmicutes	Minor	neg	neg											neg
Anaeromassilibacillus senegalensis	Firmicutes	Rare	neg
Anaerorhabdus furcosa	Firmicutes	Rare	neg
Anaerosalibacter bizertensis	Firmicutes	Rare	+
Anaerosalibacter massiliensis	Firmicutes	Rare	+	+	+
Anaerosphaera massiliensis	Firmicutes	Rare	+	neg	neg		neg	neg	+	neg		neg	neg	neg	neg
Anaerospora hongkongensis	Firmicutes	Rare	neg
Anaerostipes butyraticus	Firmicutes	Rare	+	+											+
Anaerostipes caccae	Firmicutes	Moderate	+	+	+		neg	neg	neg	+		neg	neg	+	w
Anaerostipes coli	Firmicutes	Rare	+
Anaerostipes hadrus	Firmicutes	Moderate	+	w(+)											d(+)
Anaerostipes hominis	Firmicutes	Rare	vr
Anaerostipes rhamnosivorans	Firmicutes	Rare	vr	+						w				+
Anaerostipes rhamnosus	Firmicutes	Rare	+
Anaerotignum faecicola	Firmicutes	Rare	+
Anaerotignum lactatifermentans	Firmicutes	Moderate	neg
Anaerotignum neopropionicum	Firmicutes	Rare	neg			+
Anaerotignum propionicum	Firmicutes	Rare	+
Anaerotruncus colihominis	Firmicutes	Moderate	+	+											neg
Anaerotruncus massiliensis	Firmicutes	Rare	neg	+	neg		neg		+	neg		neg	+	neg	neg
Anaerotruncus rubiinfantis	Firmicutes	Moderate	+
Anaerovorax odorimutans	Firmicutes	Rare	vr
Ancylobacter polymorphus	Proteobacteria	Rare	neg	+						neg					+
Aneurinibacillus aneurinilyticus	Firmicutes	Rare	+	+										neg
Aneurinibacillus migulanus	Firmicutes	Rare	+	neg										neg
Angelakisella massiliensis	Firmicutes	Rare	neg
Anoxybacillus flavithermus	Firmicutes	Non	+
Anoxybacillus gonensis	Firmicutes	Unlikely	+
Anoxynatronum sibiricum	Firmicutes	Rare	+
Anseongella ginsenosidimutans	Bacteroidetes	Unlikely	neg	+
Aquabacterium citratiphilum	Proteobacteria	Rare	neg
Aquabacterium commune	Proteobacteria	Rare	neg
Aquabacterium parvum	Proteobacteria	Rare	neg
Aquamicrobium lusatiense	Proteobacteria	Unlikely	neg	+
Aquincola tertiaricarbonis	Proteobacteria	Non	neg	neg
Arabia massiliensis	Actinobacteria	Rare	neg
Arachnia propionica	Actinobacteria	Rare	+
Arcanobacterium haemolyticum	Actinobacteria	Rare	+	+							neg
Arthrobacter agilis	Actinobacteria	Non	+	neg
Arthrobacter castelli	Actinobacteria	Rare	+	neg
Arthrobacter citreus	Actinobacteria	Unlikely	vr
Arthrobacter gandavensis	Actinobacteria	Unlikely	+	d	neg			neg	neg	neg		neg			neg
Arthrobacter globiformis	Actinobacteria	Unlikely	+	+
Arthrobacter koreensis	Actinobacteria	Unlikely	+
Arthrobacter luteolus	Actinobacteria	Unlikely	+	+
Arthrobacter parietis	Actinobacteria	Non	+	+
Arthrobacter pigmenti	Actinobacteria	Non	+	d
Arthrobacter russicus	Actinobacteria	Unlikely	+
Asaccharospora irregularis	Firmicutes	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Asticcacaulis biprosthecium	Proteobacteria	Unlikely	neg
Asticcacaulis excentricus	Proteobacteria	Unlikely	neg
Atlantibacter hermannii	Proteobacteria	Rare	neg	+					neg	neg					d	+
Atopobium minutum	Actinobacteria	Minor	+	d(+)											neg
Atopostipes suicloacalis	Firmicutes	Unlikely	+	+
Aureimonas altamirensis	Proteobacteria	Unlikely	neg	+
Aureimonas ureilytica	Proteobacteria	Unlikely	neg	vr
Averyella dalhousiensis	Proteobacteria	Rare	neg	+						vr					+	neg
Azoarcus pumilus	Proteobacteria	Rare	neg	neg
Azospirillum lipoferum	Proteobacteria	Rare	neg	+		neg									+
Azotobacter vinelandii	Proteobacteria	Non	neg
Bacilliculturomica massiliensis	Firmicutes	Rare	+
Bacillus altitudinis	Firmicutes	Rare	+	+
Bacillus amyloliquefaciens	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	d(+)	+
Bacillus andreraoultii	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Bacillus aneurinolyticus	Firmicutes	Rare	+	neg											neg
Bacillus anthracis	Firmicutes	Non	+	+	d		neg	neg	neg	neg		neg	neg	+	neg
Bacillus atrophaeus	Firmicutes	Rare	+	+	+		neg	neg	neg	vr		neg	neg	+	+
Bacillus badius DSM 23T	Firmicutes	Rare	+	neg	neg		neg	neg	neg			neg	neg	neg	neg
Bacillus badius DSM 5610	Firmicutes	Rare	+	neg	neg		neg	neg	neg			neg	neg	neg	neg
Bacillus baekryungensis	Firmicutes	Non	+	+
Bacillus benzoevorans	Firmicutes	Rare	+	neg									neg		neg
Bacillus caccae	Firmicutes	Rare	+
Bacillus cereus	Firmicutes	Minor	+	d	+		d(+)	neg	neg	neg	neg	neg	neg	+	d(+)
Bacillus circulans	Firmicutes	Rare	+	+	+		+	neg	d(neg)	vr		neg	+	+	+
Bacillus clausii	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Bacillus cytotoxicus	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Bacillus dakarensis	Firmicutes	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Bacillus endophyticus	Firmicutes	Unlikely	+	+								neg
Bacillus firmus	Firmicutes	Rare	+	+	+		vr	neg	neg	neg		neg	neg	+	vr
Bacillus fordii	Firmicutes	Rare	neg	neg	neg		neg	neg	neg			neg	neg	neg	neg
Bacillus halotolerans	Firmicutes	Rare	+	+	+		neg	neg	neg	+		neg	neg		+
Bacillus idriensis	Firmicutes	Rare	+	+	neg		vr	neg	neg	vr		neg	neg	+	neg
Bacillus infantis	Firmicutes	Rare	+
Bacillus kwashiorkori	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	neg	+
Bacillus licheniformis	Firmicutes	Minor	+	+	+		vr	neg	neg	+		neg	neg	+	+
Bacillus marasmi	Firmicutes	Rare	+	+	+			neg	+	+				+	+
Bacillus massilioanorexius	Firmicutes	Rare	+	+											w
Bacillus massiliogabonensis	Firmicutes	Unlikely	neg	neg	+		neg	neg	neg	+		+	neg	+	+
Bacillus massilionigeriensis	Firmicutes	Rare	+	+
Bacillus mediterraneensis	Firmicutes	Rare	+	+	+		+	neg	+	neg		neg	neg	+	+
Bacillus methanolicus	Firmicutes	Non	+	+										neg	neg
Bacillus mojavensis	Firmicutes	Rare	+	+											+
Bacillus mycoides	Firmicutes	Rare	+	+	d(+)		neg	neg	neg	neg		neg	neg	+	d(+)
Bacillus niameyensis	Firmicutes	Rare	+	neg	neg		neg	neg	neg	+		neg	neg	+	neg
Bacillus pakistanensis	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	+	+
Bacillus phocaeensis	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	neg	+
Bacillus pseudofirmus	Firmicutes	Rare	+
Bacillus pseudomycoides	Firmicutes	Unlikely	+	+
Bacillus pumilus	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Bacillus rubiinfantis	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg		neg
Bacillus sinesaloumensis	Firmicutes	Unlikely	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Bacillus siralis	Firmicutes	Rare	+	neg	vr		neg	neg	neg	neg		neg	neg	vr	vr
Bacillus smithii	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Bacillus sonorensis	Firmicutes	Rare	+	+
Bacillus subtilis	Firmicutes	Minor	+	+	+		neg	neg	neg	vr		neg	neg	d(+)	+
Bacillus testis	Firmicutes	Rare	+	+	+									+	+
Bacillus thuringiensis	Firmicutes	Rare	+	+	w		neg	neg	neg	neg		neg	neg	+	d(+)
Bacillus timonensis	Firmicutes	Rare	neg
Bacillus tuaregi	Firmicutes	Rare	+	+	neg		neg	neg	neg	+		neg	neg	neg	neg
Bacillus vallismortis	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Bacillus velezensis Variant polyfermenticus	Firmicutes	Rare	+	+	+		neg	neg	neg	+		neg	neg	neg	+
Bacillus wiedmannii	Firmicutes	Rare	+	+	+		d(neg)	neg	neg	neg		neg	neg	+	+
Bacteroides acidifaciens	Bacteroidetes	Moderate	neg
Bacteroides bouchesdurhonensis	Bacteroidetes	Moderate	neg	+	+										+
Bacteroides caccae	Bacteroidetes	Widespread	neg	+											d
Bacteroides caecimuris	Bacteroidetes	Rare	neg	+											+
Bacteroides cellulosilyticus	Bacteroidetes	Moderate	neg	+											w
Bacteroides clarus	Bacteroidetes	Moderate	neg	+											neg
Bacteroides congonensis	Bacteroidetes	Moderate	neg	+	neg		neg	neg	+	neg		+	neg	+	neg
Bacteroides coprosuis	Bacteroidetes	Rare	neg
Bacteroides cutis	Bacteroidetes	Moderate	neg
Bacteroides eggerthii	Bacteroidetes	Widespread	neg	w							neg				neg
Bacteroides faecalis	Bacteroidetes	Rare	neg	+											+
Bacteroides faecichinchillae	Bacteroidetes	Rare	neg	+											+
Bacteroides faecis	Bacteroidetes	Moderate	neg	+											neg
Bacteroides finegoldii	Bacteroidetes	Widespread	neg	+											+
Bacteroides fluxus	Bacteroidetes	Moderate	neg	+											+
Bacteroides fragilis	Bacteroidetes	Widespread	neg	+							neg				neg
Bacteroides galacturonicus	Bacteroidetes	Rare	neg	neg			neg
Bacteroides gallinarum	Bacteroidetes	Moderate	neg	+											neg
Bacteroides graminisolvens	Bacteroidetes	Rare	neg												+
Bacteroides helcogenes	Bacteroidetes	Rare	neg	+											+
Bacteroides heparinolyticus	Bacteroidetes	Rare	neg	+											+
Bacteroides ihuae	Bacteroidetes	Rare	neg	+	+		neg	neg	neg	+		+	neg	+	+
Bacteroides ilei	Bacteroidetes	Minor	neg	neg	neg		neg	neg	+	neg		neg	neg	neg	neg
Bacteroides intestinalis	Bacteroidetes	Widespread	neg	+											neg
Bacteroides luhongzhouii	Bacteroidetes	Rare	neg
Bacteroides luti	Bacteroidetes	Rare	neg
Bacteroides mediterraneensis	Bacteroidetes	Moderate	neg	+					+	+				+	+
Bacteroides ndongoniae	Bacteroidetes	Minor	neg	neg
Bacteroides neonati	Bacteroidetes	Minor	neg	neg											neg
Bacteroides nordii	Bacteroidetes	Moderate	neg	+											neg
Bacteroides oleiciplenus	Bacteroidetes	Moderate	neg	+											+
Bacteroides ovatus	Bacteroidetes	Widespread	neg	+											+
Bacteroides pectinophilus	Bacteroidetes	Moderate	neg	neg			+
Bacteroides propionicifaciens	Bacteroidetes	Rare	neg	+
Bacteroides pyogenes	Bacteroidetes	Minor	neg	+											d
Bacteroides reticulotermitis	Bacteroidetes	Rare	neg	+											+
Bacteroides salyersiae	Bacteroidetes	Moderate	neg	+											neg
Bacteroides sp. Strain D8	Bacteroidetes	Rare	neg	+											neg
Bacteroides stercorirosoris	Bacteroidetes	Moderate	neg	+											neg
Bacteroides stercoris	Bacteroidetes	Widespread	neg	+											neg
Bacteroides thetaiotaomicron	Bacteroidetes	Widespread	neg	w											+
Bacteroides timonensis	Bacteroidetes	Rare	neg	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Bacteroides togonis	Bacteroidetes	Minor	neg	neg			+		+					+
Bacteroides uniformis	Bacteroidetes	Widespread	neg	+											+
Bacteroides xylanisolvens	Bacteroidetes	Widespread	neg	+							neg				vr
Bacteroides zhangwenhongi	Bacteroidetes	Rare	neg
Bacteroides zoogleoformans	Bacteroidetes	Rare	neg	+											+
Bariatricus massiliensis	Firmicutes	Minor	+
Barnesiella intestinihominis	Bacteroidetes	Moderate	neg	+											neg
Barnesiella viscericola	Bacteroidetes	Rare	neg	+											neg
Bartonella vinsonii	Proteobacteria	Non	neg	neg
Bavariicoccus seileri	Firmicutes	Rare	+
Bdellovibrio bacteriovorus	Bdellovibrionota	Moderate	neg
Beduinella massiliensis	Firmicutes	Rare	neg
Beduini massiliensis	Firmicutes	Rare	neg	+
Beduinibacterium massiliense	Firmicutes	Rare	+
Belnapia soli	Proteobacteria	Rare	neg	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Berryella intestinalis	Actinobacteria	Rare	+
Bhargavaea beijingensis	Firmicutes	Rare	+	neg						neg				neg	+
Bhargavaea cecembensis	Firmicutes	Non	+	neg											neg
Bifidobacterium adolescentis	Actinobacteria	Widespread	+	+	d		neg	neg	d	d	neg	neg	neg	neg	d
Bifidobacterium aerophilum	Actinobacteria	Rare	+	+	+		neg	neg	neg	w		neg	neg	neg	w
Bifidobacterium angulatum	Actinobacteria	Moderate	+	+	vr		neg	neg	neg	vr	neg	neg	neg	neg	vr
Bifidobacterium animalis	Actinobacteria	Moderate	+	+	neg		neg	neg	neg	+	neg	neg	neg	neg	+
Bifidobacterium animalis subsp. lactis	Actinobacteria	Rare	+	+			neg	neg	+	neg		neg	neg	neg	neg
Bifidobacterium asteroides	Actinobacteria	Rare	+	+			+								+
Bifidobacterium avesanii	Actinobacteria	Rare	+	+	neg		neg	w	neg			neg	neg	neg	neg
Bifidobacterium biavatii	Actinobacteria	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Bifidobacterium bifidum	Actinobacteria	Widespread	+	+	neg		neg	neg	neg	neg	neg	neg	neg	neg	neg
Bifidobacterium boum	Actinobacteria	Rare	+	+	neg		neg	neg	neg	+		neg	neg	neg	neg
Bifidobacterium breve	Actinobacteria	Widespread	+	+	+		neg	neg	neg	+	vr	neg	neg	+	+
Bifidobacterium callitrichidarum	Actinobacteria	Rare	+	+	+		neg	neg	neg	neg		neg		neg	+
Bifidobacterium catenulatum	Actinobacteria	Moderate	+	+	vr		vr	neg	d	vr	neg	neg	neg	neg	+
Bifidobacterium catenulatum subsp. kashiwanohense	Actinobacteria	Rare	+	+											+
Bifidobacterium choerinum	Actinobacteria	Rare	+	+			neg								neg
Bifidobacterium coryneforme	Actinobacteria	Rare	+												d(+)
Bifidobacterium cuniculi	Actinobacteria	Rare	+	+			neg								neg
Bifidobacterium dentium	Actinobacteria	Moderate	+	+	+		vr	vr	neg	+	neg	neg	neg	neg	+
Bifidobacterium eulemuris	Actinobacteria	Rare	+	+	+		neg	w	+	+		neg	+	w	+
Bifidobacterium faecale	Actinobacteria	Rare	+	+	+		+	neg	neg	+		neg	neg	neg	+
Bifidobacterium gallicum	Actinobacteria	Rare	+	+	d		neg	neg	neg	d		neg	neg	neg	w
Bifidobacterium imperatoris	Actinobacteria	Rare	+	+										neg
Bifidobacterium indicum	Actinobacteria	Rare	+	+			+								+
Bifidobacterium lemurum	Actinobacteria	Rare	+	+	+		neg	+	+	w		neg	neg	neg	+
Bifidobacterium longum subsp. infantis	Actinobacteria	Moderate	+	+	neg		+	neg	neg	+	neg	neg	neg	neg	neg
Bifidobacterium longum subsp. longum	Actinobacteria	Widespread	+	+	neg		neg	neg	neg	+	neg	neg	neg	neg	neg
Bifidobacterium longum subsp. suis	Actinobacteria	Rare	+	+			neg								neg
Bifidobacterium merycicum	Actinobacteria	Rare	+	+			neg								neg
Bifidobacterium minimum	Actinobacteria	Rare	+	+											neg
Bifidobacterium mongoliense	Actinobacteria	Unlikely	+	+	vr		vr	neg	neg	+		neg	neg	neg	vr
Bifidobacterium moukalabense	Actinobacteria	Rare	+	+											+
Bifidobacterium myosotis	Actinobacteria	Rare	+	+	neg		neg	neg	neg	neg		neg	d	neg	+
Bifidobacterium pseudocatenulatum	Actinobacteria	Widespread	+	+	vr		d	neg	neg	vr	neg	neg	neg	neg	vr
Bifidobacterium pseudolongum	Actinobacteria	Minor	+	+	neg		neg	neg	neg	+		neg	neg	neg	neg
Bifidobacterium pseudolongum subsp. globosum	Actinobacteria	Rare	+	+											d
Bifidobacterium pullorum subsp. gallinarum	Actinobacteria	Rare	+	+						d(+)					+
Bifidobacterium pullorum subsp. saeculare	Actinobacteria	Rare	+												d(neg)
Bifidobacterium ramosum	Actinobacteria	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Bifidobacterium reuteri	Actinobacteria	Rare	+	+	w		w	neg	neg	neg		neg	neg	neg	+
Bifidobacterium ruminantium	Actinobacteria	Minor	+	+	+		neg	neg	neg	+		neg	neg	neg	vr
Bifidobacterium saguini	Actinobacteria	Rare	+	+	+		w	neg	neg	w		neg	neg	neg	+
Bifidobacterium scardovii	Actinobacteria	Minor	+	+	+		+	neg	d	neg	neg	neg	neg	neg	+
Bifidobacterium stellenboschense	Actinobacteria	Rare	+	+	+		w	neg	neg	+		neg	neg	+	+
Bifidobacterium subtile	Actinobacteria	Rare	+	+			+								d
Bifidobacterium thermacidophilum	Actinobacteria	Rare	+				d(w)								vr
Bifidobacterium thermophilum	Actinobacteria	Rare	+	+	neg		neg	neg	neg	d		neg	neg	neg	neg
Bifissio spartinae	Bacteroidetes	Rare	neg
Bilophila wadsworthia	Desulfobacterota	Widespread	neg
Bittarella massiliensis	Firmicutes	Moderate	neg
Blastococcus massiliensis	Actinobacteria	Rare	+
Blastomonas natatoria	Proteobacteria	Unlikely	neg	+
Blautia brookingsii	Firmicutes	Rare	+
Blautia caecimuris	Firmicutes	Rare	+	+											+
Blautia coccoides	Firmicutes	Minor	+	+						+		+			+
Blautia faecicola	Firmicutes	Rare	+	neg	neg		neg	neg	+	neg		neg	neg		+
Blautia faecis	Firmicutes	Rare	+		neg		neg	neg	+	neg		neg	neg	neg	neg
Blautia glucerasea	Firmicutes	Rare	+	+
Blautia hansenii	Firmicutes	Moderate	+	+											neg
Blautia hominis	Firmicutes	Rare	+	+	+		+	neg	+	+		+	+	neg	+
Blautia hydrogenotrophica	Firmicutes	Moderate	+	+
Blautia intestinalis	Firmicutes	Rare	+
Blautia liquoris	Firmicutes	Rare	+
Blautia luti	Firmicutes	Minor	+	+										+	neg
Blautia marasmi	Firmicutes	Rare	+
Blautia massiliensis	Firmicutes	Moderate	neg	+	+		+		+					+	+
Blautia obeum	Firmicutes	Widespread	+	+	+					+			+	+	vr
Blautia phocaeensis	Firmicutes	Rare	+
Blautia producta	Firmicutes	Widespread	+	+							neg			neg
Blautia provencensis	Firmicutes	Rare	+
Blautia pseudococcoides	Firmicutes	Rare	+	+						+		+			+
Blautia schinkii	Firmicutes	Rare	+	+
Blautia stercoris	Firmicutes	Minor	+	+	neg		neg	neg	+	neg		neg	neg	neg	neg
Blautia wexlerae	Firmicutes	Moderate	+	+
Bordetella bronchiseptica	Proteobacteria	Non	neg	neg
Bordetella hinzii	Proteobacteria	Unlikely	neg	neg					neg
Bordetella trematum	Proteobacteria	Non	neg	neg					neg
Bosea massiliensis	Proteobacteria	Rare	neg	neg
Brachybacterium conglomeratum	Actinobacteria	Rare	+	+											d
Brachybacterium faecium	Actinobacteria	Unlikely	+	+											neg
Brachybacterium ginsengisoli	Actinobacteria	Unlikely	+	+
Brachybacterium massiliense	Actinobacteria	Rare	+	+	+		+	neg	+	neg		neg	+	neg	neg
Brachybacterium muris	Actinobacteria	Rare	+	+
Brachybacterium paraconglomeratum	Actinobacteria	Rare	+	+											+
Brachymonas chironomi	Proteobacteria	Unlikely	neg	neg
Brachyspira aalborgi	Spirochaetes	Rare	neg	+
Brachyspira hyodysenteriae	Spirochaetes	Rare	neg
Brachyspira pilosicoli	Spirochaetes	Unlikely	neg	+										+
Bradyrhizobium denitrificans	Proteobacteria	Rare	neg	neg
Bradyrhizobium elkanii	Proteobacteria	Rare	neg	neg
Bradyrhizobium ganzhouense	Proteobacteria	Unlikely	neg
Bradyrhizobium icense	Proteobacteria	Unlikely	neg
Bradyrhizobium japonicum	Proteobacteria	Rare	neg	neg
Bradyrhizobium neotropicale	Proteobacteria	Rare	neg	neg
Brassicibacter mesophilus	Firmicutes	Rare	neg
Brenneria populi Li et al. 2015	Proteobacteria	Rare	neg	+	+		d	neg	d	+		neg	neg	+	+
Brevibacillus agri	Firmicutes	Unlikely	+	+	neg		neg	neg	neg	neg		neg	neg	w(neg)	neg
Brevibacillus borstelensis	Firmicutes	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	w(neg)	neg
Brevibacillus brevis	Firmicutes	Rare	vr	+										+	neg
Brevibacillus centrosporus	Firmicutes	Unlikely	+	+	neg		neg	neg	neg	neg		neg	neg	w(neg)	neg
Brevibacillus choshinensis	Firmicutes	Rare	+	+
Brevibacillus formosus	Firmicutes	Unlikely	+	+										+	neg
Brevibacillus laterosporus	Firmicutes	Rare	vr	+										+
Brevibacillus massiliensis	Firmicutes	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Brevibacillus parabrevis	Firmicutes	Unlikely	vr	+										neg
Brevibacillus thermoruber	Firmicutes	Non	+
Brevibacterium aurantiacum	Actinobacteria	Unlikely	+	+											+
Brevibacterium casei	Actinobacteria	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Brevibacterium celere	Actinobacteria	Rare	+	neg
Brevibacterium epidermidis	Actinobacteria	Rare	+	neg
Brevibacterium ihuae	Actinobacteria	Rare	+
Brevibacterium iodinum	Actinobacteria	Unlikely	vr	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Brevibacterium linens	Actinobacteria	Unlikely	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Brevibacterium luteolum	Actinobacteria	Rare	+
Brevibacterium mcbrellneri	Actinobacteria	Unlikely	+
Brevibacterium otitidis	Actinobacteria	Non	+
Brevibacterium paucivorans	Actinobacteria	Rare	+
Brevibacterium pityocampae	Actinobacteria	Rare	+	neg
Brevibacterium ravenspurgense	Actinobacteria	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Brevibacterium samyangense	Actinobacteria	Rare	+	w
Brevibacterium sanguinis	Actinobacteria	Rare	+	neg
Brevibacterium senegalense	Actinobacteria	Rare	+	neg
Brevundimonas aurantiaca	Proteobacteria	Rare	neg
Brevundimonas bacteroides	Proteobacteria	Rare	neg
Brevundimonas bullata	Proteobacteria	Rare	neg	+
Brevundimonas diminuta	Proteobacteria	Rare	neg	neg					neg
Brevundimonas intermedia	Proteobacteria	Rare	neg
Brevundimonas nasdae	Proteobacteria	Rare	neg	+
Brevundimonas terrae	Proteobacteria	Rare	neg	neg
Brevundimonas vesicularis	Proteobacteria	Rare	neg	neg					neg
Brochothrix thermosphacta	Firmicutes	Unlikely	+	+	vr		neg	neg	neg	neg	+	neg	neg	+	+
Brucella anthropi	Proteobacteria	Unlikely	neg	+		+
Brucella cytisi	Proteobacteria	Rare	neg
Brucella melitensis	Proteobacteria	Non	neg
Brucella tritici	Proteobacteria	Unlikely	neg	neg		+
Buchnera aphidicola	Proteobacteria	Non	neg
Bulleidia extructa	Firmicutes	Rare	+
Burkholderia arboris	Proteobacteria	Rare	neg	+
Burkholderia cepacia	Proteobacteria	Rare	neg	+		+			neg						+
Burkholderia gladioli	Proteobacteria	Unlikely	neg	+		+	neg								neg
Burkholderia mallei	Proteobacteria	Unlikely	neg
Burkholderia multivorans	Proteobacteria	Rare	neg	+		+	neg								+
Burkholderia pseudomallei	Proteobacteria	Unlikely	neg
Burkholderia pyrrocinia	Proteobacteria	Unlikely	neg	+
Burkholderia vietnamiensis	Proteobacteria	Rare	neg	+										+	neg
Buttiauxella agrestis	Proteobacteria	Rare	neg	+	+					neg					+	d(+)
Butyribacter intestini	Firmicutes	Rare	+	+	neg		neg	neg	neg	+		neg	neg	neg	neg
Butyricicoccus faecihominis	Firmicutes	Rare	+	+											neg
Butyricicoccus porcorum	Firmicutes	Rare	+	+										neg	neg
Butyricicoccus pullicaecorum	Firmicutes	Minor	+	+											+
Butyricimonas faecalis	Bacteroidetes	Rare	neg	+	neg		neg		neg			neg	neg	+
Butyricimonas faecihominis	Bacteroidetes	Rare	neg	+	neg				neg			neg	neg		neg
Butyricimonas paravirosa	Bacteroidetes	Rare	neg	+	neg				neg			neg	neg		neg
Butyricimonas phoceensis	Bacteroidetes	Rare	neg	+
Butyricimonas synergistica	Bacteroidetes	Minor	neg	+	neg				neg			neg	neg		neg
Butyricimonas virosa	Bacteroidetes	Moderate	neg	+	neg				neg			neg	neg		neg
Butyrivibrio crossotus	Firmicutes	Widespread	neg	w											neg
Butyrivibrio fibrisolvens	Firmicutes	Minor	neg	+											+
Butyrivibrio hungatei	Firmicutes	Unlikely	neg
Butyrivibrio proteoclasticus	Firmicutes	Rare	+
Caballeronia novacaledonica	Proteobacteria	Rare	neg	neg
Caecibacter massiliensis	Firmicutes	Rare
Caldibacillus thermoamylovorans	Firmicutes	Unlikely	+	+	+		+	neg	neg	+		neg	neg	+	+
Caldicellulosiruptor diazotrophicus	Firmicutes	Non	+	+
Caldicoprobacter faecalis	Firmicutes	Unlikely	neg	+											+
Caloranaerobacter azorensis	Firmicutes	Non	neg	+													+
Campylobacter avium	Proteobacteria	Non	neg
Campylobacter coli	Proteobacteria	Unlikely	neg	neg
Campylobacter concisus	Proteobacteria	Minor	neg	neg
Campylobacter curvus	Proteobacteria	Rare	neg	neg
Campylobacter faecalis	Proteobacteria	Rare	neg
Campylobacter fetus subsp. fetus	Proteobacteria	Rare	neg
Campylobacter gracilis	Proteobacteria	Minor	neg	neg
Campylobacter hominis	Proteobacteria	Minor	neg	+
Campylobacter hyointestinalis subsp. hyointestinalis	Proteobacteria	Unlikely	neg
Campylobacter jejuni subsp. doylei	Proteobacteria	Rare	neg
Campylobacter jejuni subsp. jejuni	Proteobacteria	Unlikely	neg
Campylobacter lanienae	Proteobacteria	Rare	neg
Campylobacter lari subsp. concheus	Proteobacteria	Rare	neg
Campylobacter lari subsp. lari	Proteobacteria	Rare	neg	neg
Campylobacter mucosalis	Proteobacteria	Rare	neg
Campylobacter peloridis	Proteobacteria	Rare	neg
Campylobacter rectus	Proteobacteria	Rare	neg	neg
Campylobacter showae	Proteobacteria	Rare	neg	neg
Campylobacter sputorum	Proteobacteria	Non	neg	neg
Campylobacter troglodytis	Proteobacteria	Rare	neg
Campylobacter upsaliensis	Proteobacteria	Rare	neg	neg
Campylobacter ureolyticus	Proteobacteria	Minor	neg
Candidatus Babela massiliensis	Candidatus Dependentiae	Unlikely	neg
Candidatus Dorea massiliensis	Firmicutes	Rare	+
Candidatus Stoquefichus massiliensis	Firmicutes	Rare	+	+
Capnocytophaga canimorsus	Bacteroidetes	Unlikely	neg	+											neg
Capnocytophaga gingivalis	Bacteroidetes	Non	neg	+
Capnocytophaga granulosa	Bacteroidetes	Rare	neg	+
Capnocytophaga leadbetteri	Bacteroidetes	Rare	neg	w(neg)
Capnocytophaga ochracea	Bacteroidetes	Rare	neg	+					neg		neg
Capnocytophaga sputigena	Bacteroidetes	Rare	neg	+							neg
Capnocytophaga stomatis	Bacteroidetes	Unlikely	neg	+
Caproicibacter fermentans	Firmicutes	Rare	neg	+
Cardiobacterium hominis	Proteobacteria	Rare	neg	+											neg
Cardiobacterium valvarum	Proteobacteria	Rare	neg	+
Carnobacterium divergens	Firmicutes	Non	+	+			+	neg	neg	neg		neg	neg	+	+
Carnobacterium inhibens	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+	neg
Carnobacterium maltaromaticum	Firmicutes	Unlikely	+	+	+		neg	neg	neg	w		+	neg	+	+
Carnobacterium mobile	Firmicutes	Non	+	+			neg	d	neg	neg		neg	neg	+	+
Casaltella massiliensis	Firmicutes	Rare	neg
Catenibacillus scindens	Firmicutes	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Catenibacterium mitsuokai	Firmicutes	Moderate	+	+											+
Catenulispora acidiphila	Actinobacteria	Unlikely	+
Catonella morbi	Firmicutes	Rare	neg	d(+)											d(neg)
Caulobacter vibrioides	Proteobacteria	Unlikely	neg	+	neg									neg	neg
Cedecea davisae	Proteobacteria	Rare	neg	+					neg	d(neg)					+	neg
Cedecea lapagei	Proteobacteria	Rare	neg	+						neg					+
Cedecea neteri	Proteobacteria	Rare	neg	+						neg					+	neg
Cellulomonas carbonis	Actinobacteria	Unlikely	+	+										+
Cellulomonas composti	Actinobacteria	Rare	+	+			neg						neg
Cellulomonas denverensis	Actinobacteria	Rare	+	+											+
Cellulomonas fimi	Actinobacteria	Rare	+
Cellulomonas flavigena	Actinobacteria	Rare	+	+
Cellulomonas hominis	Actinobacteria	Rare	+	+			+	neg				+	+		+
Cellulomonas massiliensis	Actinobacteria	Rare	+	neg
Cellulomonas parahominis	Actinobacteria	Rare	+
Cellulomonas timonensis	Actinobacteria	Rare	+	+	+		neg	neg	neg	neg		neg	neg	neg	+
Cellulosilyticum lentocellum	Firmicutes	Rare	neg
Cellulosilyticum ruminicola	Firmicutes	Rare	neg	neg											neg		neg
Cellulosimicrobium cellulans	Actinobacteria	Rare	+	+										+
Centipeda periodontii	Firmicutes	Rare	neg	+											d
Cerasibacillus quisquiliarum	Firmicutes	Non	+	neg	neg		neg	neg	+	neg		neg	neg	neg	neg
Cetobacterium somerae	Fusobacteria	Rare	neg
Chelatococcus asaccharovorans	Proteobacteria	Unlikely	neg
Chitinophaga agri	Bacteroidetes	Unlikely	neg
Chlamydia trachomatis	Chlamydiae	Non	neg
Chloracidobacterium thermophilum	Acidobacteria	Non	neg
Christensenella hongkongensis	Firmicutes	Minor	+	+											neg
Christensenella massiliensis	Firmicutes	Rare	neg
Christensenella minuta	Firmicutes	Minor	neg	+											+
Christensenella timonensis	Firmicutes	Minor	neg
Chromobacterium violaceum	Proteobacteria	Unlikely	neg	+			+			neg				+	neg
Chromohalobacter japonicus	Proteobacteria	Unlikely	neg	+					neg
Chromohalobacter salexigens	Proteobacteria	Unlikely	neg	+
Chryseobacterium gallinarum	Bacteroidetes	Unlikely	neg	w						neg					neg
Chryseobacterium gleum	Bacteroidetes	Unlikely	neg	+		neg	neg								neg
Chryseobacterium hominis	Bacteroidetes	Rare	neg	+
Chryseobacterium indologenes	Bacteroidetes	Rare	neg	+		d									neg
Chryseobacterium oranimense	Bacteroidetes	Rare	neg	neg
Chryseobacterium taklimakanense	Bacteroidetes	Rare	neg	+
Chryseobacterium viscerum	Bacteroidetes	Non	neg	neg
Chryseomicrobium amylolyticum	Firmicutes	Rare	+	neg											neg
Citrobacter amalonaticus	Proteobacteria	Rare	neg	+					+	neg					neg	+
Citrobacter braakii	Proteobacteria	Rare	neg	+					+	d					neg	+
Citrobacter europaeus	Proteobacteria	Rare	neg	+	+		+	+	+	neg		neg	neg	+	+
Citrobacter farmeri	Proteobacteria	Minor	neg	+					+	+					neg	+
Citrobacter freundii	Proteobacteria	Minor	neg	+					+	neg					neg	+
Citrobacter gillenii	Proteobacteria	Rare	neg	+					+							+
Citrobacter intermedius	Proteobacteria	Unlikely	neg
Citrobacter koseri	Proteobacteria	Minor	neg	+					+	d					neg	+
Citrobacter murliniae	Proteobacteria	Rare	neg	vr					+	neg					neg	+
Citrobacter pasteurii	Proteobacteria	Rare	neg	+	vr		+	+	+	neg				+	neg
Citrobacter portucalensis	Proteobacteria	Rare	neg	+	+		+	+	+	neg		neg	neg	+	+
Citrobacter rodentium	Proteobacteria	Rare	neg	+						neg					+	+
Citrobacter sedlakii	Proteobacteria	Rare	neg	+	d(+)				neg	neg					neg	+
Citrobacter werkmanii	Proteobacteria	Rare	neg	+						neg					neg	+
Citrobacter youngae	Proteobacteria	Rare	neg		neg				+	neg					neg	+
Citroniella saccharovorans	Firmicutes	Rare	+	+
Cloacibacillus evryensis	Synergistetes	Minor	neg
Cloacibacillus porcorum	Synergistetes	Rare	neg
Cloacibacterium normanense	Bacteroidetes	Rare	neg	+
Clostridioides difficile	Firmicutes	Widespread	+	+											vr
Clostridioides mangenotii	Firmicutes	Rare	+	+
Clostridium acetobutylicum	Firmicutes	Rare	+	+						+					+
Clostridium amazonense	Firmicutes	Rare	+
Clostridium amazonitimonense	Firmicutes	Rare	+	+
Clostridium aminobutyricum	Firmicutes	Rare	+	+
Clostridium aminophilum	Firmicutes	Rare	+
Clostridium amylolyticum	Firmicutes	Rare	+	+
Clostridium anorexicamassiliense	Firmicutes	Rare	+
Clostridium argentinense	Firmicutes	Rare	+
Clostridium aurantibutyricum	Firmicutes	Rare	+	+											+
Clostridium autoethanogenum	Firmicutes	Rare	+
Clostridium baratii	Firmicutes	Minor	+	+											+
Clostridium beijerinckii	Firmicutes	Minor	+	+
Clostridium boliviensis	Firmicutes	Rare	+
Clostridium bornimense	Firmicutes	Rare	vr
Clostridium botulinum Gp I	Firmicutes	Unlikely	+
Clostridium botulinum Gp II	Firmicutes	Unlikely	+
Clostridium botulinum Gp III	Firmicutes	Unlikely	+
Clostridium botulinum Gp IV	Firmicutes	Unlikely	+
Clostridium budayi	Firmicutes	Rare	+	+											neg
Clostridium butyricum	Firmicutes	Widespread	+	neg
Clostridium cadaveris	Firmicutes	Rare	+
Clostridium cagae	Firmicutes	Rare	+	+	+		neg	neg	+	neg		neg	neg	neg	neg
Clostridium carboxidivorans	Firmicutes	Rare	+
Clostridium carnis	Firmicutes	Rare	+
Clostridium celatum	Firmicutes	Minor	+
Clostridium cellulosi	Firmicutes	Unlikely	neg	+											+
Clostridium cellulovorans	Firmicutes	Rare	neg	+
Clostridium chartatabidum	Firmicutes	Rare	+	+											+
Clostridium chauvoei	Firmicutes	Rare	+	+											+
Clostridium cochlearium	Firmicutes	Minor	+
Clostridium cocleatum	Firmicutes	Rare	+	+						neg		neg
Clostridium colicanis	Firmicutes	Rare	neg	+											w
Clostridium colinum	Firmicutes	Rare	+	+
Clostridium combesii	Firmicutes	Rare	+	w											neg
Clostridium culturomicium	Firmicutes	Rare	+						+
Clostridium dakarense	Firmicutes	Rare	+	+
Clostridium diolis	Firmicutes	Rare	+	+											+
Clostridium disporicum	Firmicutes	Minor	+	+											+
Clostridium drakei	Firmicutes	Unlikely	+
Clostridium estertheticum	Firmicutes	Unlikely	+	+											+
Clostridium fallax	Firmicutes	Rare	+
Clostridium felsineum	Firmicutes	Rare	+
Clostridium fessum	Firmicutes	Rare	+	+											neg
Clostridium gasigenes	Firmicutes	Unlikely	+	+											+
Clostridium haemolyticum	Firmicutes	Rare	+
Clostridium herbivorans	Firmicutes	Rare	+
Clostridium hylemonae	Firmicutes	Minor	+	+											neg
Clostridium ihumii	Firmicutes	Rare	+
Clostridium innocuum	Firmicutes	Widespread	+	+											+
Clostridium intestinale	Firmicutes	Rare	+	+
Clostridium isatidis	Firmicutes	Unlikely	+	+											+
Clostridium jeddahense	Firmicutes	Rare	+
Clostridium jeddahitimonense	Firmicutes	Rare	+						+
Clostridium kluyveri	Firmicutes	Unlikely	vr
Clostridium leptum	Firmicutes	Widespread	+
Clostridium magnum	Firmicutes	Rare	neg
Clostridium malenominatum	Firmicutes	Rare	+
Clostridium manihotivorum	Firmicutes	Rare	+
Clostridium massiliamazoniense	Firmicutes	Rare	+	+
Clostridium massiliodielmoense	Firmicutes	Rare	+	+
Clostridium mediterraneense	Firmicutes	Rare	+
Clostridium merdae	Firmicutes	Rare	+	+
Clostridium metallolevans	Firmicutes	Rare	+	+
Clostridium methoxybenzovorans	Firmicutes	Rare	+
Clostridium methylpentosum	Firmicutes	Moderate	+
Clostridium minihomine	Firmicutes	Rare	+
Clostridium moniliforme	Firmicutes	Rare	+	+											neg
Clostridium neonatale	Firmicutes	Minor	+
Clostridium niameyense	Firmicutes	Rare	+	+
Clostridium nigeriense	Firmicutes	Rare	+	+
Clostridium nitritogenes	Firmicutes	Rare	+	+											d(+)
Clostridium novyi A	Firmicutes	Rare	+
Clostridium oceanicum	Firmicutes	Rare	+	+											neg
Clostridium paraputrificum	Firmicutes	Moderate	+								neg
Clostridium pasteurianum	Firmicutes	Rare	+				+
Clostridium perfringens	Firmicutes	Widespread	+	+											neg
Clostridium phoceensis	Firmicutes	Rare	neg	+
Clostridium polyendosporum	Firmicutes	Rare	+
Clostridium polynesiense	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Clostridium polysaccharolyticum	Firmicutes	Rare	neg	neg											neg
Clostridium populeti	Firmicutes	Rare	neg	+													neg
Clostridium punense	Firmicutes	Rare	+
Clostridium putrefaciens	Firmicutes	Minor	+
Clostridium rectalis	Firmicutes	Rare	+	neg	+		neg	neg	+	+		+	neg	+	+
Clostridium roseum	Firmicutes	Rare	+	+			+								+
Clostridium saccharobutylicum	Firmicutes	Unlikely	+
Clostridium saccharoperbutylacetonicum	Firmicutes	Rare	+	+						+					+
Clostridium sardiniense	Firmicutes	Rare	+	+											+
Clostridium sartagoforme	Firmicutes	Minor	+
Clostridium saudiense	Firmicutes	Minor	+
Clostridium scatologenes	Firmicutes	Rare	+
Clostridium schirmacherense	Firmicutes	Unlikely	+
Clostridium scindens	Firmicutes	Moderate	+	+
Clostridium senegalense	Firmicutes	Rare	+
Clostridium septicum	Firmicutes	Rare	+								neg
Clostridium sporogenes	Firmicutes	Minor	+	+											neg
Clostridium sporosphaeroides	Firmicutes	Minor	+
Clostridium subterminale	Firmicutes	Rare	+	neg											neg
Clostridium sulfidigenes	Firmicutes	Rare	+
Clostridium symbiosum	Firmicutes	Widespread	neg	+											neg
Clostridium taeniosporum	Firmicutes	Unlikely	+
Clostridium tertium	Firmicutes	Moderate	+	+	neg		neg	neg	neg	neg	neg	neg	neg	+	+
Clostridium tetani	Firmicutes	Unlikely	+	neg											neg
Clostridium thermarum	Firmicutes	Unlikely	+	+
Clostridium thermobutyricum	Firmicutes	Rare	vr	+													+
Clostridium thiosulfatireducens	Firmicutes	Rare	+
Clostridium transplantifaecale	Firmicutes	Rare	+	+	+		+	neg	+	+		+	+	+	+
Clostridium tyrobutyricum	Firmicutes	Rare	+	+											neg
Clostridium vincentii	Firmicutes	Rare	+
Clostridium viride	Firmicutes	Rare	+
Colibacter massiliensis	Firmicutes	Rare	+	+
Colidextribacter massiliensis	Firmicutes	Rare	neg
Collinsella aerofaciens	Actinobacteria	Widespread	+	+							neg				w(neg)
Collinsella bouchesdurhonensis	Actinobacteria	Minor	+	+			+	neg	neg	+		neg	neg		+
Collinsella ihumii	Actinobacteria	Rare	+	+
Collinsella intestinalis	Actinobacteria	Moderate	+	+											+
Collinsella massiliensis	Actinobacteria	Rare	+	neg	neg		neg	neg	+	neg			neg	neg	neg
Collinsella phocaeensis	Actinobacteria	Rare	neg
Collinsella provencensis	Actinobacteria	Rare	+
Collinsella stercoris	Actinobacteria	Minor	+	+											+
Collinsella tanakaei	Actinobacteria	Minor	+	+											+
Collinsella vaginalis	Actinobacteria	Rare	+
Comamonas aquatica	Proteobacteria	Non	neg
Comamonas denitrificans	Proteobacteria	Rare	neg
Comamonas kerstersii	Proteobacteria	Rare	neg	neg
Comamonas koreensis	Proteobacteria	Unlikely	neg
Comamonas terrigena	Proteobacteria	Unlikely	neg
Comamonas testosteroni	Proteobacteria	Rare	neg	neg
Comamonas thiooxydans	Proteobacteria	Rare	neg
Companilactobacillus alimentarius	Firmicutes	Rare	+	+	+		+	vr	neg	neg	neg	neg	neg	+	+
Companilactobacillus farciminis	Firmicutes	Rare	+	+	+		neg	neg	neg	+		neg	neg	+	+
Companilactobacillus mindensis	Firmicutes	Unlikely	+	+			neg							+	+
Companilactobacillus versmoldensis	Firmicutes	Unlikely	+	+											neg
Conexibacter woesei	Actinobacteria	Rare	+	neg
Congobacterium massiliense	Firmicutes	Rare	+
Coprobacillus cateniformis	Firmicutes	Moderate	+	+											+
Coprobacter fastidiosus	Bacteroidetes	Moderate	neg	+
Coprobacter secundus	Bacteroidetes	Moderate	neg	+											w
Coprobacter secundus subsp. similis	Bacteroidetes	Rare	neg	+											neg
Coprococcus catus	Firmicutes	Widespread	+	w											neg
Coprococcus comes	Firmicutes	Widespread	+	+											d(neg)
Coprococcus eutactus	Firmicutes	Widespread	+	+											+
Coprococcus phoceensis	Firmicutes	Rare	vr	neg	neg		neg	neg	+	neg		neg	neg	neg	neg
Coraliomargarita akajimensis	Verrucomicrobia	Non	neg	neg	neg		neg	neg	+	neg		neg	neg	neg	neg
Coriobacterium glomerans	Actinobacteria	Unlikely	+	+											+
Corynebacterium accolens	Actinobacteria	Rare	+	+											neg
Corynebacterium afermentans	Actinobacteria	Rare	+	neg							neg
Corynebacterium ammoniagenes	Actinobacteria	Rare	+	+
Corynebacterium amycolatum	Actinobacteria	Rare	+	+	neg		neg	neg	neg	neg	neg	neg	neg	neg	neg
Corynebacterium appendicis	Actinobacteria	Rare	+	d(+)											neg
Corynebacterium argentoratense	Actinobacteria	Rare	+	+
Corynebacterium aurimucosum	Actinobacteria	Rare	+	+							neg				neg
Corynebacterium bouchesdurhonense	Actinobacteria	Rare	+
Corynebacterium bovis	Actinobacteria	Rare	+	+											neg
Corynebacterium callunae	Actinobacteria	Unlikely	+	+											+
Corynebacterium casei	Actinobacteria	Rare	+	+	neg		neg	neg	d(neg)	neg		neg	neg		neg
Corynebacterium coyleae	Actinobacteria	Rare	+	w	neg		neg	neg	+	neg		neg	neg	neg	neg
Corynebacterium cystitidis	Actinobacteria	Rare	+	+											neg
Corynebacterium diphtheriae	Actinobacteria	Non	vr
Corynebacterium doosanense	Actinobacteria	Rare	+	+
Corynebacterium durum	Actinobacteria	Minor	+	+
Corynebacterium efficiens	Actinobacteria	Rare	+	+											neg
Corynebacterium falsenii	Actinobacteria	Rare	+	+	neg		neg	neg	+	neg		neg	neg	neg	neg
Corynebacterium flavescens	Actinobacteria	Rare	vr	+											neg
Corynebacterium freneyi	Actinobacteria	Rare	+	+	d(neg)		d(+)	neg	d(+)	neg	neg	neg	neg		neg
Corynebacterium genitalium	Actinobacteria	Rare	+	neg
Corynebacterium glaucum	Actinobacteria	Rare	+	+											neg
Corynebacterium glucuronolyticum	Actinobacteria	Rare	+	+
Corynebacterium glutamicum	Actinobacteria	Rare	+	+											neg
Corynebacterium ihumii	Actinobacteria	Rare	+	+	+		neg	neg		+		+	+	+	+
Corynebacterium jeddahense	Actinobacteria	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Corynebacterium jeikeium	Actinobacteria	Rare	+	+											neg
Corynebacterium kroppenstedtii	Actinobacteria	Minor	+	+							neg
Corynebacterium lipophiloflavum	Actinobacteria	Rare	+	neg
Corynebacterium lujinxingii	Actinobacteria	Rare	+
Corynebacterium matruchotii	Actinobacteria	Unlikely	+	+
Corynebacterium minutissimum	Actinobacteria	Rare	+	+										+	neg
Corynebacterium mucifaciens	Actinobacteria	Rare	+	+			neg	neg		neg	neg	neg	neg	neg
Corynebacterium neomassiliense	Actinobacteria	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Corynebacterium otitidis	Actinobacteria	Rare	+	neg
Corynebacterium pacaense	Actinobacteria	Rare	+	+	w		neg	neg	neg	neg		neg	neg	neg	+
Corynebacterium propinquum	Actinobacteria	Rare	+	neg
Corynebacterium provencense	Actinobacteria	Rare	+
Corynebacterium pseudodiphtheriticum	Actinobacteria	Rare	+
Corynebacterium pseudogenitalium	Actinobacteria	Rare	+	d
Corynebacterium pyruviciproducens	Actinobacteria	Rare	+	+
Corynebacterium riegelii	Actinobacteria	Rare	+	neg	neg		neg	neg	+	neg		neg		neg	neg
Corynebacterium sanguinis	Actinobacteria	Rare	+	+
Corynebacterium simulans	Actinobacteria	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	vr	neg
Corynebacterium singulare	Actinobacteria	Rare	+	+
Corynebacterium stationis	Actinobacteria	Rare	+	+											neg
Corynebacterium striatum	Actinobacteria	Rare	+	+							neg				neg
Corynebacterium suicordis	Actinobacteria	Rare	+	neg	neg			neg	neg	neg		neg	neg	neg	neg
Corynebacterium sundsvallense	Actinobacteria	Rare	+	+							neg			neg	neg
Corynebacterium tuberculostearicum	Actinobacteria	Rare	+	vr			vr		+		neg			vr
Corynebacterium ulcerans	Actinobacteria	Rare	+	+
Corynebacterium urealyticum	Actinobacteria	Rare	+	neg
Corynebacterium ureicelerivorans	Actinobacteria	Rare	+	+
Corynebacterium urinapleomorphum	Actinobacteria	Rare	+	neg
Corynebacterium variabile	Actinobacteria	Unlikely	+	vr	neg		neg	neg	neg	neg		neg	neg		neg
Corynebacterium wankanglinii	Actinobacteria	Rare	+
Corynebacterium xerosis	Actinobacteria	Rare	+	+	neg		neg	neg	+	neg		neg		neg	d(neg)
Crassaminicella thermophila	Firmicutes	Unlikely	+
Criibacterium bergeronii	Firmicutes	Rare	vr
Cronobacter condimenti	Proteobacteria	Unlikely	neg	+	+					+				+	+
Cronobacter muytjensii	Proteobacteria	Rare	neg	+
Cronobacter sakazakii	Proteobacteria	Minor	neg	+					neg	+					+	neg
Cronobacter turicensis	Proteobacteria	Rare	neg	+
Cruoricaptor ignavus	Bacteroidetes	Rare	neg	neg
Cryptobacterium curtum	Actinobacteria	Minor	+
Culturomica massiliensis	Bacteroidetes	Rare	neg
Cupriavidus metallidurans	Proteobacteria	Unlikely	neg	neg		neg									neg
Curtobacterium flaccumfaciens	Actinobacteria	Unlikely	+
Cutibacterium acnes	Actinobacteria	Moderate	+	+							neg
Cutibacterium acnes subsp. defendens	Actinobacteria	Rare	+
Cutibacterium avidum	Actinobacteria	Rare	+	+						neg		neg			neg
Cutibacterium granulosum	Actinobacteria	Minor	+
Cytophaga hutchinsonii	Bacteroidetes	Rare	neg
Dakarella massiliensis	Proteobacteria	Rare	neg	+											+
Dakotella fusiforme	Firmicutes	Rare	+
Dehalobacter restrictus	Firmicutes	Non	neg
Dehalobacterium formicoaceticum	Firmicutes	Unlikely	+
Dehalococcoides mccartyi	Chloroflexi	Unlikely	unk
Deinococcus aquaticus	Deinococcus-Thermus	Unlikely	neg
Deinococcus caeni	Deinococcus-Thermus	Unlikely	neg
Deinococcus geothermalis	Deinococcus-Thermus	Non	+
Deinococcus proteolyticus	Deinococcus-Thermus	Unlikely	+	+
Deinococcus reticulitermitis	Deinococcus-Thermus	Unlikely	neg	+
Deinococcus wulumuqiensis	Deinococcus-Thermus	Unlikely	+	neg
Delftia acidovorans	Proteobacteria	Rare	neg	neg
Delftia lacustris	Proteobacteria	Unlikely	neg
Delftia tsuruhatensis	Proteobacteria	Rare	neg
Dellaglioa algida	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Denitrobacterium detoxificans	Actinobacteria	Rare	+
Dermabacter hominis	Actinobacteria	Rare	+	+	vr		neg	neg	neg	vr	neg	neg	neg	+	vr
Dermacoccus barathri	Actinobacteria	Non	+	neg	neg										neg
Dermacoccus nishinomiyaensis	Actinobacteria	Rare	+	neg
Desemzia incerta	Firmicutes	Rare	+	+
Desnuesiella massiliensis	Firmicutes	Rare	+	+
Desulfitobacterium dichloroeliminans	Firmicutes	Unlikely	+
Desulfitobacterium hafniense	Firmicutes	Minor	neg	neg											neg
Desulfococcus multivorans	Proteobacteria	Rare	neg
Desulfocurvibacter africanus	Proteobacteria	Unlikely	neg														+
Desulfofarcimen acetoxidans	Firmicutes	Unlikely	neg
Desulfomicrobium baculatum	Proteobacteria	Unlikely	neg
Desulfomicrobium orale	Proteobacteria	Unlikely	neg														w
Desulforamulus reducens	Firmicutes	Unlikely	+														+
Desulforudis audaxviator	Firmicutes	Unlikely	+
Desulfoscipio gibsoniae	Firmicutes	Rare	neg
Desulfosporosinus youngiae	Firmicutes	Rare	neg
Desulfotomaculum ruminis	Firmicutes	Unlikely	+
Desulfovibrio desulfuricans	Proteobacteria	Minor	neg
Desulfovibrio diazotrophicus	Proteobacteria	Rare	neg
Desulfovibrio fairfieldensis	Proteobacteria	Minor	neg
Desulfovibrio intestinalis	Proteobacteria	Rare	neg														+
Desulfovibrio legallii	Proteobacteria	Rare	+
Desulfovibrio longreachensis	Proteobacteria	Rare	neg
Desulfovibrio piger	Proteobacteria	Moderate	neg
Desulfovibrio trichonymphae	Proteobacteria	Non	unk
Desulfovibrio vulgaris	Proteobacteria	Rare	neg
Desulfurispirillum indicum	Chrysiogenetes	Unlikely	neg
Desulfurobacterium thermolithotrophum	Aquificae	Non	neg
Devosia chinhatensis	Proteobacteria	Rare	neg
Devosia limi	Proteobacteria	Unlikely	neg	neg
Devosia riboflavina	Proteobacteria	Unlikely	neg	neg
Dialister hominis	Firmicutes	Rare	neg
Dialister invisus	Firmicutes	Moderate	neg	neg											neg
Dialister massiliensis	Firmicutes	Rare	neg	neg
Dialister micraerophilus	Firmicutes	Rare	neg
Dialister pneumosintes	Firmicutes	Minor	neg
Dialister propionicifaciens	Firmicutes	Rare	neg
Dialister succinatiphilus	Firmicutes	Minor	neg
Dielma fastidiosa	Firmicutes	Minor	neg	neg
Dietzia cercidiphylli	Actinobacteria	Unlikely	+
Dietzia cinnamea	Actinobacteria	Rare	+	neg						neg				neg
Dietzia kunjamensis	Actinobacteria	Unlikely	+	neg											neg
Dietzia maris	Actinobacteria	Rare	+	+						neg					neg
Dietzia natronolimnaea	Actinobacteria	Rare	+	neg
Dolosigranulum pigrum	Firmicutes	Unlikely	+	+										d
Dorea faecis	Firmicutes	Minor
Dorea formicigenerans	Firmicutes	Widespread	+	+											neg
Dorea hylemonae	Firmicutes	Rare
Dorea longicatena	Firmicutes	Widespread	+	+	+		neg	neg	neg	neg		neg	neg	neg	+		neg
Dorea phocaeensis	Firmicutes	Rare	neg	neg	neg		neg	neg	d	neg		neg	neg	neg	neg
Dorea scindens	Firmicutes	Rare
Drancourtella massiliensis	Firmicutes	Rare	+						+	+
Dubosiella newyorkensis	Firmicutes	Rare	+
Duncaniella dubosii	Bacteroidetes	Unlikely	neg	neg											neg
Duncaniella muris	Bacteroidetes	Rare	neg	+											neg
Duodenibacillus massiliensis	Proteobacteria	Minor	+
Dyadobacter beijingensis	Bacteroidetes	Unlikely	neg	+
Dyadobacter fermentans	Bacteroidetes	Unlikely	neg	+
Dysgonomonas capnocytophagoides	Bacteroidetes	Rare	neg	+
Dysgonomonas gadei	Bacteroidetes	Rare	neg	+											+
Dysgonomonas massiliensis	Bacteroidetes	Rare	neg	+	+		+							+	+
Dysgonomonas mossii	Bacteroidetes	Rare	neg	+											+
Dysosmobacter welbionis	Firmicutes	Moderate	neg	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Edwardsiella tarda	Proteobacteria	Minor	neg	+							neg				neg
Eggerthella guodeyinii	Actinobacteria	Rare	+
Eggerthella lenta	Actinobacteria	Widespread	+	neg											neg
Eggerthella sinensis	Actinobacteria	Rare	+	neg
Eggerthella timonensis	Actinobacteria	Rare	+	+	+			+	+			+		+	+
Eggerthia catenaformis	Firmicutes	Minor	+	+						d		d			+
Eikenella corrodens	Proteobacteria	Rare	neg	neg
Eisenbergiella massiliensis	Firmicutes	Moderate	neg
Eisenbergiella tayi	Firmicutes	Moderate	neg												neg
Elizabethkingia meningoseptica	Bacteroidetes	Unlikely	neg	w(+)											neg
Elizabethkingia miricola	Bacteroidetes	Non	neg	+											neg
Ellagibacter isourolithinifaciens	Actinobacteria	Rare	+
Elusimicrobium minutum	Elusimicrobia	Unlikely	neg	+			neg	w	w	neg		w	neg	+	neg
Emergencia timonensis	Firmicutes	Minor	+
Empedobacter brevis	Bacteroidetes	Rare	neg	+		neg									neg
Empedobacter falsenii	Bacteroidetes	Rare	neg	neg	neg		neg	neg		neg		neg	neg	neg	neg
Enhydrobacter aerosaccus	Proteobacteria	Rare	neg	+
Enorma massiliensis	Actinobacteria	Minor	+
Enorma phocaeensis	Actinobacteria	Rare	neg
Enorma timonensis	Actinobacteria	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Ensifer adhaerens	Proteobacteria	Unlikely	neg	neg
Enterobacter asburiae	Proteobacteria	Minor	neg	+					neg	+					+	d
Enterobacter cancerogenus	Proteobacteria	Minor	neg	+					neg						+
Enterobacter cloacae	Proteobacteria	Moderate	neg	+					neg							d(+)
Enterobacter cloacae subsp. dissolvens	Proteobacteria	Rare	neg							+						+
Enterobacter himalayensis	Proteobacteria	Minor
Enterobacter hormaechei subsp. hormaechei	Proteobacteria	Minor	neg	vr					neg	+						+
Enterobacter hormaechei subsp. steigerwaltii	Proteobacteria	Rare	neg	vr					neg	+						+
Enterobacter hormaechei subsp. xiangfangensis	Proteobacteria	Rare	neg	+	+		neg	neg	neg	+		neg	neg	+	+
Enterobacter kobei	Proteobacteria	Rare	neg	+			+	+	d	w					+	d
Enterobacter ludwigii	Proteobacteria	Rare	neg							+
Enterobacter massiliensis	Proteobacteria	Rare	neg	+	+		neg	neg	neg	neg	+	neg		+
Enterobacter mori	Proteobacteria	Rare	neg
Enterobacter roggenkampii	Proteobacteria	Rare	neg
Enterobacter soli	Proteobacteria	Rare	neg	+
Enterobacter timonensis	Proteobacteria	Rare	neg
Enterocloster aldenensis	Firmicutes	Minor	+	+											vr
Enterocloster asparagiformis	Firmicutes	Moderate	+	+
Enterocloster bolteae	Firmicutes	Widespread	+	+											neg
Enterocloster citroniae	Firmicutes	Moderate	+	+											neg
Enterocloster clostridioformis	Firmicutes	Widespread	+	+											d(neg)
Enterocloster lavalensis	Firmicutes	Minor	+	+											+
Enterococcus asini	Firmicutes	Rare	+	+	+		neg	neg	neg	d	vr	neg	neg	+	+
Enterococcus avium	Firmicutes	Minor	+	+	+		d	+	vr	+	+	d	neg	+	+
Enterococcus burkinafasonensis	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Enterococcus caccae	Firmicutes	Rare	+	+	+		+	neg	neg	+	+	d	neg	+	+
Enterococcus canintestini	Firmicutes	Rare	+	+	+		neg	d(+)	neg	+		d(neg)	neg	+	+
Enterococcus canis	Firmicutes	Rare	+	+	+		+	+	neg	d		neg		+
Enterococcus casseliflavus	Firmicutes	Moderate	+	+	+		neg	vr	vr	+	+	neg	neg	+	+
Enterococcus cecorum	Firmicutes	Rare	+	+	+		neg	neg	neg	+	+	neg	neg	+	+
Enterococcus columbae	Firmicutes	Rare	+	+	+		neg	d	neg	+		neg	neg	+	+
Enterococcus devriesei	Firmicutes	Moderate	+	+	+		d	neg	neg	neg		neg	neg	+	+
Enterococcus diestrammenae	Firmicutes	Rare	+	+	+		neg	+	+	+		neg	+	+	+
Enterococcus dispar	Firmicutes	Rare	+	+	+		neg	neg	neg	neg	+	neg	neg	+	+
Enterococcus durans	Firmicutes	Moderate	+	+	+		d(+)	d(+)	neg	neg	+	neg	neg	+	+
Enterococcus eurekensis	Firmicutes	Rare	+	+						d				+	+
Enterococcus faecalis	Firmicutes	Widespread	+	+	+		vr	neg	neg	neg	vr	vr	neg	+	+
Enterococcus faecium	Firmicutes	Widespread	+	+	+		+	neg	neg	+	+	vr	neg	+	+
Enterococcus gallinarum	Firmicutes	Rare	+	+	+		neg	neg	neg	neg	+	neg	neg	+	+
Enterococcus gilvus	Firmicutes	Rare	+							neg					+
Enterococcus haemoperoxidus	Firmicutes	Rare	+	+	+		neg	neg	neg	+		neg		+
Enterococcus hermanniensis	Firmicutes	Rare	+	+	+		neg	neg	neg					+
Enterococcus hirae	Firmicutes	Minor	+	+	+		neg	neg	neg	neg	+	+	neg	+	+
Enterococcus italicus	Firmicutes	Rare	+	+	d		neg	neg	neg	w		neg	neg	+	+
Enterococcus lactis	Firmicutes	Rare	+	+	+			neg	neg			+	neg	+	+
Enterococcus malodoratus	Firmicutes	Rare	+	+	+		+	+	neg	neg		+	neg	+	+
Enterococcus massiliensis	Firmicutes	Rare	+	+										+
Enterococcus mediterraneensis	Firmicutes	Rare	+	+	+		+	neg	neg	neg		neg	neg	+	+
Enterococcus moraviensis	Firmicutes	Rare	+	+	+		neg	neg	neg	+		neg		+
Enterococcus mundtii	Firmicutes	Rare	+	+	+		neg	neg	neg	neg	+	d(+)	neg	+	+
Enterococcus pallens	Firmicutes	Rare	+	+						neg			neg		+
Enterococcus phoeniculicola	Firmicutes	Rare	+	+	+		+	vr	neg	vr	vr	neg	neg	+	+
Enterococcus pseudoavium	Firmicutes	Rare	+	+	+		neg	+	neg	+	+	neg		+
Enterococcus raffinosus	Firmicutes	Rare	+	+						d				+	+
Enterococcus saccharolyticus	Firmicutes	Rare	+	+	+		neg	+	neg	+		neg	neg	+	+
Enterococcus saigonensis	Firmicutes	Unlikely	+	+	+		neg	+	neg	neg		neg	neg	+	+
Enterococcus sulfureus	Firmicutes	Rare	+	+	+		+	+		+				+
Enterococcus thailandicus	Firmicutes	Rare	+	+	+		+	neg	neg	neg		+	neg	+	+
Enterococcus timonensis	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	+	+
Enterococcus villorum	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Enteroscipio rubneri	Actinobacteria	Rare	+	neg											neg
Enterovibrio nigricans	Proteobacteria	Unlikely	neg												neg
Ereboglobus luteus	Verrucomicrobia	Unlikely	neg
Erwinia billingiae	Proteobacteria	Unlikely	neg	+	+		+	neg	+	neg		neg	neg	+	+
Erwinia tasmaniensis	Proteobacteria	Unlikely	neg	+
Erwinia teleogrylli	Proteobacteria	Rare	neg	+	+		+	+	+	+		neg	neg	+	+
Erysipelatoclostridium ramosum	Firmicutes	Widespread	+	+	neg		neg	neg	neg	neg	+	neg	neg	neg	+		+
Erysipelatoclostridium saccharogumia	Firmicutes	Minor
Erysipelatoclostridium spiroforme	Firmicutes	Minor
Erysipelothrix larvae	Firmicutes	Rare	+
Escherichia albertii	Proteobacteria	Minor	neg	+						neg					neg
Escherichia coli	Proteobacteria	Widespread	neg	+	neg		+	neg	vr	neg		neg	neg	+	d	+
Escherichia dysenteriae	Proteobacteria	Rare
Escherichia fergusonii	Proteobacteria	Minor	neg	+					neg	neg					w	neg
Escherichia marmotae	Proteobacteria	Unlikely	neg	+	neg		+	neg	neg	neg		neg	neg	+	neg
Escherichia ruysiae	Proteobacteria	Rare	neg	+
Ethanoligenens harbinense	Firmicutes	Rare	+	+		neg									+		neg
Eubacterium barkeri	Firmicutes	Rare	+	+											neg		+
Eubacterium biforme	Firmicutes	Moderate	+	+											d(+)
Eubacterium brachy	Firmicutes	Rare	+	neg											neg
Eubacterium callanderi	Firmicutes	Minor	+
Eubacterium cellulosolvens	Firmicutes	Minor	+	+											+
Eubacterium coprostanoligenes	Firmicutes	Minor	+	w											+
Eubacterium dolichum	Firmicutes	Moderate	+	neg											neg
Eubacterium infirmum	Firmicutes	Rare	+	neg											neg
Eubacterium limosum	Firmicutes	Moderate	+	+											neg
Eubacterium maltosivorans	Firmicutes	Rare	+
Eubacterium multiforme	Firmicutes	Rare	+	w(+)											neg
Eubacterium nodatum	Firmicutes	Rare	+	neg											neg
Eubacterium oxidoreducens	Firmicutes	Rare	+
Eubacterium plexicaudatum	Firmicutes	Rare	+	+											d(+)
Eubacterium pyruvativorans	Firmicutes	Rare	+	neg
Eubacterium ramulus	Firmicutes	Moderate	+	+											d(+)
Eubacterium rectale	Firmicutes	Widespread	+	+										+	d
Eubacterium ruminantium	Firmicutes	Rare	+	+											neg
Eubacterium saphenum	Firmicutes	Rare	+	neg											neg
Eubacterium siraeum	Firmicutes	Widespread	+	neg											neg
Eubacterium sulci	Firmicutes	Rare	+	neg							neg				neg
Eubacterium tenue	Firmicutes	Minor	+	w(+)											neg
Eubacterium uniforme	Firmicutes	Rare	+	+											+
Eubacterium ventriosum	Firmicutes	Widespread	+	w											neg
Eubacterium xylanophilum	Firmicutes	Rare	+	neg											neg
Eubacterium yurii	Firmicutes	Rare	+	neg											neg
Ewingella americana	Proteobacteria	Rare	neg	+						neg					+
Exiguobacterium aurantiacum	Firmicutes	Rare	+	+	+			neg	neg	+					d
Exiguobacterium marinum	Firmicutes	Rare	vr	+
Exiguobacterium mexicanum	Firmicutes	Rare	+	+	w		neg	neg	neg	w				+	+
Exiguobacterium undae	Firmicutes	Rare	+	+	d		neg	neg	neg	d				+	+
Ezakiella coagulans	Bacteroidetes	Minor	neg	neg											neg
Ezakiella massiliensis	Bacteroidetes	Rare	+
Ezakiella peruensis	Firmicutes	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Facklamia hominis	Firmicutes	Rare	+	neg						neg
Facklamia languida	Firmicutes	Rare	+	+
Faecalibacillus faecis	Firmicutes	Rare	+	w											+
Faecalibacillus intestinalis	Firmicutes	Rare	+	w											+
Faecalibacterium prausnitzii	Firmicutes	Widespread	neg	+
Faecalibaculum rodentium	Firmicutes	Rare	+
Faecalicatena contorta	Firmicutes	Minor	+	+											+
Faecalicatena faecis	Firmicutes	Moderate
Faecalicatena fissicatena	Firmicutes	Minor	+	+
Faecalicatena glycyrrhizinilyticum	Firmicutes	Minor
Faecalicatena gnavus	Firmicutes	Moderate
Faecalicatena lactaris	Firmicutes	Moderate
Faecalicatena orotica	Firmicutes	Minor	+	+											+
Faecalicatena torques	Firmicutes	Moderate
Faecalicoccus pleomorphus	Firmicutes	Minor	+	+											neg
Faecalimonas umbilicata	Firmicutes	Rare	+	+											+
Faecalitalea cylindroides	Firmicutes	Widespread	+	+											d(+)
Fannyhessea vaginae	Actinobacteria	Minor	+
Fastidiosipila sanguinis	Firmicutes	Rare	+
Fenollaria massiliensis	Firmicutes	Minor	neg
Fenollaria timonensis	Firmicutes	Rare	neg
Fermentimonas caenicola	Bacteroidetes	Rare	neg
Ferrimonas balearica	Proteobacteria	Rare	neg
Fibrobacter succinogenes	Fibrobacteres	Unlikely	neg	+											neg
Fictibacillus arsenicus	Firmicutes	Unlikely	+	neg						neg					neg
Filifactor alocis	Firmicutes	Minor	neg	neg											neg
Filifactor villosus	Firmicutes	Unlikely	+	neg
Finegoldia magna	Firmicutes	Widespread	+	neg							neg
Flaviflexus massiliensis	Actinobacteria	Rare	+
Flavobacterium banpakuense	Bacteroidetes	Unlikely	neg	neg
Flavobacterium caeni	Bacteroidetes	Non	neg	neg
Flavobacterium cheniae	Bacteroidetes	Rare	neg	neg
Flavobacterium daejeonense	Bacteroidetes	Unlikely	neg	+
Flavobacterium lindanitolerans	Bacteroidetes	Rare	neg	neg
Flavobacterium oncorhynchi	Bacteroidetes	Unlikely	neg	neg
Flavobacterium sakaeratica	Bacteroidetes	Rare	neg
Flavonifractor plautii	Firmicutes	Widespread	vr	neg							neg				neg
Flexispira rappini	Proteobacteria	Rare	neg	neg
Flintibacter butyricus	Firmicutes	Rare	neg	neg											neg
Fournierella massiliensis	Firmicutes	Moderate	neg	+	neg		neg	neg	+	+		neg	neg	neg	+
Francisella tularensis	Proteobacteria	Non	neg	+
Franconibacter pulveris	Proteobacteria	Rare	neg	+					neg
Fredinandcohnia humi	Firmicutes	Non	+	neg	w		neg	neg	neg	neg		neg	neg	neg	w
Fretibacterium fastidiosum	Synergistetes	Rare	neg	neg
Fructilactobacillus florum	Firmicutes	Unlikely	+	+	neg		w	neg	neg	neg				neg	neg
Fructilactobacillus fructivorans	Firmicutes	Unlikely	+	+			+								d
Fructilactobacillus sanfranciscensis	Firmicutes	Rare	+	+			+								neg
Fucophilus fucoidanolyticus	Verrucomicrobia	Rare	neg
Fundidesulfovibrio putealis	Proteobacteria	Rare	neg
Furfurilactobacillus rossiae	Firmicutes	Unlikely	+	+	neg		w	neg	neg	neg		neg	neg	+	neg
Fusicatenibacter saccharivorans	Firmicutes	Moderate	+	+											+
Fusobacterium canifelinum	Fusobacteria	Rare	neg	d(w)
Fusobacterium gonidiaformans	Fusobacteria	Minor	neg
Fusobacterium massiliense	Fusobacteria	Rare	neg	neg					+
Fusobacterium mortiferum	Fusobacteria	Moderate	neg	+											+
Fusobacterium naviforme	Fusobacteria	Rare	neg
Fusobacterium necrogenes	Fusobacteria	Rare	neg
Fusobacterium necrophorum	Fusobacteria	Minor	neg
Fusobacterium necrophorum subsp. funduliforme	Fusobacteria	Rare	neg	w											neg
Fusobacterium nucleatum	Fusobacteria	Minor	neg	neg							neg
Fusobacterium nucleatum subsp. animalis	Fusobacteria	Rare	neg	w
Fusobacterium nucleatum subsp. nucleatum	Fusobacteria	Minor	neg	w
Fusobacterium nucleatum subsp. polymorphum	Fusobacteria	Rare	neg	w
Fusobacterium nucleatum subsp. vincentii	Fusobacteria	Rare	neg	w
Fusobacterium perfoetens	Fusobacteria	Rare	neg	+											neg
Fusobacterium periodonticum	Fusobacteria	Minor	neg	+
Fusobacterium pseudoperiodonticum	Fusobacteria	Unlikely	neg	d(+)
Fusobacterium russii	Fusobacteria	Minor	neg
Fusobacterium ulcerans	Fusobacteria	Rare	neg	+
Fusobacterium varium	Fusobacteria	Moderate	neg	+											neg
Gabonia massiliensis	Bacteroidetes	Rare	neg	+					+	+		+		+	neg
Gabonibacter massiliensis	Bacteroidetes	Minor	neg	+					+
Gabonibacter timonensis	Bacteroidetes	Rare	+
Gallibacterium anatis	Proteobacteria	Rare	neg	+	neg									neg	neg	neg
Gardnerella leopoldii	Actinobacteria	Unlikely	neg
Gardnerella vaginalis	Actinobacteria	Minor	neg	+	neg										neg
Gemella asaccharolytica	Firmicutes	Rare	vr	neg
Gemella haemolysans	Firmicutes	Minor	+	+							neg
Gemella morbillorum	Firmicutes	Minor	+	+	vr		neg	neg	neg	neg	neg	neg	neg	+	neg
Gemella sanguinis	Firmicutes	Minor	+	+	neg		neg	neg	neg	neg	neg	neg	neg	+	neg
Gemmatimonas groenlandica	Gemmatimonadetes	Non	neg
Gemmiger formicilis	Firmicutes	Moderate	neg												neg
Gemmiger variabile	Firmicutes	Moderate
Geobacillus stearothermophilus	Firmicutes	Unlikely	+	+	neg		neg	neg	+	+		neg	neg	neg	neg
Geobacillus vulcani	Firmicutes	Unlikely	+	+	neg					d(+)		neg		+	d(+)
Geodermatophilus obscurus	Actinobacteria	Non	+	+
Georgenia muralis	Actinobacteria	Rare	+	neg
Georgenia satyanarayanai	Actinobacteria	Unlikely	+
Geosporobacter ferrireducens	Firmicutes	Unlikely	neg
Gleimia europaea	Actinobacteria	Rare	+	+	neg			neg		d		d	neg		neg
Globicatella sulfidifaciens	Firmicutes	Rare	vr	+	+		neg	neg	neg	neg		neg	neg	neg
Glutamicibacter arilaitensis	Actinobacteria	Unlikely	+	neg
Glutamicibacter protophormiae	Actinobacteria	Rare	+	neg
Gorbachella massiliensis	Firmicutes	Rare	neg
Gordonia alkanivorans	Actinobacteria	Rare	+	neg
Gordonia rubripertincta	Actinobacteria	Unlikely	+	+
Gordonia terrae	Actinobacteria	Rare	+	+
Gordonibacter massiliensis	Actinobacteria	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	+	+
Gordonibacter pamelaeae	Actinobacteria	Moderate	+	neg											neg
Gordonibacter urolithinfaciens	Actinobacteria	Minor	+	neg											neg
Gorillibacterium timonense	Firmicutes	Rare	neg
Gottschalkia acidurici	Firmicutes	Unlikely	+
Gracilibacillus dipsosauri	Firmicutes	Rare	+	w
Gracilibacillus massiliensis	Firmicutes	Rare	+	neg
Gracilibacillus phocaeensis	Firmicutes	Rare	+
Gracilibacillus thailandensis	Firmicutes	Non	+	+											+
Gracilibacillus timonensis	Firmicutes	Rare	+
Granulicatella adiacens	Firmicutes	Minor	+	+							neg
Granulicatella elegans	Firmicutes	Minor	+	+							neg
Granulicatella para-adiacens	Firmicutes	Rare	+	+
Grimontia hollisae	Proteobacteria	Rare	neg	+					neg	neg					neg	neg
Gulosibacter bifidus	Actinobacteria	Unlikely	+	neg
Haemophilus ducreyi	Proteobacteria	Rare	neg	w											neg
Haemophilus haemolyticus	Proteobacteria	Minor	neg	+											neg
Haemophilus influenzae	Proteobacteria	Minor	neg	+							neg				neg
Haemophilus parahaemolyticus	Proteobacteria	Minor	neg	+											neg
Haemophilus parainfluenzae	Proteobacteria	Widespread	neg	+							neg				neg
Haemophilus paraphrohaemolyticus	Proteobacteria	Rare	neg	+											neg
Haemophilus pittmaniae	Proteobacteria	Minor	neg	+
Haemophilus quentini	Proteobacteria	Rare	neg	+
Haemophilus sputorum	Proteobacteria	Minor	neg	+										neg
Hafnia alvei	Proteobacteria	Minor	neg	+					neg	neg					d
Hafnia paralvei	Proteobacteria	Rare	neg	+						neg					neg
Hahella ganghwensis	Proteobacteria	Rare	neg	neg
Halanaerobaculum tunisiense	Firmicutes	Unlikely	neg	+
Halobacillus dabanensis	Firmicutes	Unlikely	+	+
Halobacillus ihumii	Firmicutes	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Halobacillus karajensis	Firmicutes	Non	+	+
Halobacillus massiliensis	Firmicutes	Unlikely	+
Halobacillus salinus	Firmicutes	Rare	+	+
Halobacillus trueperi	Firmicutes	Unlikely	+	+
Halobacteroides halobius	Firmicutes	Unlikely	neg	+													+
Haloferax alexandrinus	Euryarchaeota	Unlikely	neg	+										+
Haloferax massiliensis	Euryarchaeota	Rare	neg
Haloimpatiens massiliensis	Firmicutes	Rare	+	+	+		+	+	+	+		+	neg	+	+
Halomonas massiliensis	Proteobacteria	Rare	neg
Halomonas muralis	Proteobacteria	Non	neg
Halomonas salina	Proteobacteria	Non	neg	neg		neg									neg
Halomonas utahensis	Proteobacteria	Unlikely	neg
Halopseudomonas bauzanensis	Proteobacteria	Unlikely	neg	neg
Halopseudomonas pelagia	Proteobacteria	Unlikely	neg
Haploplasma axanthum	Tenericutes	Unlikely	neg	+											+
Harryflintia acetispora	Firmicutes	Rare	neg	+											neg
Hathewaya histolytica	Firmicutes	Rare	+
Hathewaya limosa	Firmicutes	Rare	+	neg											neg
Hathewaya massiliensis	Firmicutes	Rare	+	+	+		neg	neg	+	+		+	+	+
Helcobacillus massiliensis	Actinobacteria	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	w	neg
Helcococcus sueciensis	Firmicutes	Rare	+	+						neg
Helicobacter bilis	Proteobacteria	Unlikely	neg
Helicobacter canadensis	Proteobacteria	Unlikely	neg
Helicobacter canis	Proteobacteria	Unlikely	neg	neg
Helicobacter cinaedi	Proteobacteria	Rare	neg	vr
Helicobacter felis	Proteobacteria	Non	neg	neg
Helicobacter fennelliae	Proteobacteria	Rare	neg
Helicobacter heilmannii	Proteobacteria	Non	neg
Helicobacter macacae	Proteobacteria	Unlikely	neg
Helicobacter pametensis	Proteobacteria	Rare	neg
Helicobacter pullorum	Proteobacteria	Minor	neg	neg
Helicobacter pylori	Proteobacteria	Non	neg	neg
Helicobacter rodentium	Proteobacteria	Rare	neg
Helicobacter winghamensis	Proteobacteria	Rare	neg
Heliomicrobium modesticaldum	Firmicutes	Unlikely	neg
Herbaspirillum autotrophicum	Proteobacteria	Unlikely	neg
Herbaspirillum huttiense	Proteobacteria	Rare	neg	+	neg					neg		neg	neg		neg
Herbinix hemicellulosilytica	Firmicutes	Unlikely	+
Herbinix luporum	Firmicutes	Unlikely	+
Herminiimonas contaminans	Proteobacteria	Unlikely	neg
Hespellia porcina	Firmicutes	Rare	+	+
Hespellia stercorisuis	Firmicutes	Rare	+	+
Heyndrickxia oleronia	Firmicutes	Unlikely	neg	+	neg		neg	neg	neg	neg		neg	neg	+	d
Heyndrickxia sporothermodurans	Firmicutes	Unlikely	+	w	d		neg	neg	neg	d		neg	neg	w	d
Histophilus somni	Proteobacteria	Rare	neg	+											neg
Holdemanella biformis	Firmicutes	Moderate	+	+											+
Holdemania filiformis	Firmicutes	Moderate	+	+											+
Holdemania massiliensis	Firmicutes	Minor	+	+	+		+							+	+
Holophaga foetida	Acidobacteria	Non	neg
Howardella ureilytica	Firmicutes	Rare	+
Hugonella massiliensis	Actinobacteria	Rare	+	neg	neg		neg	+	+	neg		neg	neg	+	neg
Humisphaera borealis	Planctomycetes	Unlikely	neg
Hungatella effluvii	Firmicutes	Minor	+	+
Hungatella hathewayi	Firmicutes	Widespread	+	+											+
Hungatella saccharolyticum	Firmicutes	Rare
Hungatella xylanolytica	Firmicutes	Rare	neg	+											+
Hydrogenibacillus schlegelii	Firmicutes	Unlikely	vr	neg									neg
Hydrogenoanaerobacterium saccharovorans	Firmicutes	Rare	neg	+											neg
Hydrogenophaga pseudoflava	Proteobacteria	Unlikely	neg	+
Hydrogenovibrio crunogenus	Proteobacteria	Unlikely	neg
Hymenobacter rigui	Bacteroidetes	Rare	neg	neg
Hymenobacter russus	Bacteroidetes	Unlikely	neg	neg
Hyphomicrobium facile	Proteobacteria	Rare	neg
Ihubacter massiliensis	Firmicutes	Rare	neg
Ihuprevotella massiliensis	Bacteroidetes	Rare	neg
Ileibacterium valens	Firmicutes	Rare	+
Inediibacterium massiliense	Firmicutes	Rare	+	+											+
Intestinibacillus massiliensis	Firmicutes	Rare	neg
Intestinibacter bartlettii	Firmicutes	Widespread	+	+											neg
Intestinibaculum porci	Firmicutes	Unlikely	+	+	w		neg	neg	neg	w		neg	neg	w	+
Intestinimonas butyriciproducens	Firmicutes	Moderate	+
Intestinimonas gabonensis	Firmicutes	Rare	neg
Intestinimonas massiliensis	Firmicutes	Moderate	neg	neg	neg		neg	neg	+	neg		neg	neg	neg	neg
Intestinimonas timonensis	Firmicutes	Rare	neg
Isoptericola variabilis	Actinobacteria	Rare	+	+						neg					neg
Janibacter anophelis	Actinobacteria	Rare	+	neg						neg					neg
Janibacter hoylei	Actinobacteria	Non	+	neg
Janibacter limosus	Actinobacteria	Unlikely	+	+											neg
Janibacter terrae	Actinobacteria	Rare	+	vr	neg										neg
Jeotgalibaca arthritidis	Firmicutes	Unlikely	+	+	neg			neg	neg	neg		neg	neg	+	neg
Jeotgalibaca porci	Firmicutes	Unlikely	+	+	+			neg	neg	neg		neg	neg	+	+
Jeotgalicoccus halotolerans	Firmicutes	Rare	+
Johnsonella ignava	Firmicutes	Rare	neg	neg											neg
Jonquetella anthropi	Synergistetes	Rare	neg
Kalamiella piersonii	Proteobacteria	Unlikely	neg
Kallipyga gabonensis	Firmicutes	Rare	+	+
Kallipyga massiliensis	Firmicutes	Rare	+	w
Kandleria vitulina	Firmicutes	Rare	+	+											+
Kerstersia gyiorum	Proteobacteria	Rare	neg
Khelaifiella massiliensis	Firmicutes	Rare	+
Kineothrix alysoides	Firmicutes	Rare	neg
Kingella denitrificans	Proteobacteria	Unlikely	neg	+		neg									neg
Kingella kingae	Proteobacteria	Rare	neg	+
Kingella oralis	Proteobacteria	Unlikely	neg	w
Kiritimatiella glycovorans	Kiritimatiellaeota	Unlikely	neg
Klebsiella aerogenes	Proteobacteria	Moderate	neg	+					neg	+					+
Klebsiella grimontii	Proteobacteria	Minor	neg	+
Klebsiella michiganensis	Proteobacteria	Minor	neg	+
Klebsiella oxytoca	Proteobacteria	Moderate	neg	+					+
Klebsiella pneumoniae	Proteobacteria	Widespread	neg	+	+				neg	+		neg	neg	+	+
Klebsiella pneumoniae subsp. ozaenae	Proteobacteria	Rare	neg	+
Klebsiella pneumoniae subsp. rhinoscleromatis	Proteobacteria	Rare	neg	+
Klebsiella quasipneumoniae subsp. quasipneumoniae	Proteobacteria	Minor	neg	+	+		neg	neg	d(neg)	+		neg	neg	d	+
Klebsiella quasivariicola	Proteobacteria	Minor
Klebsiella variicola	Proteobacteria	Minor	neg	+
Kluyvera ascorbata	Proteobacteria	Minor	neg	+					+	+					+	+
Kluyvera cryocrescens	Proteobacteria	Rare	neg	+						+					+	+
Kluyvera georgiana	Proteobacteria	Rare	neg	+	+					+					+	+
Kluyvera intermedia	Proteobacteria	Rare	neg	+						+					+	+
Kocuria carniphila	Actinobacteria	Unlikely	+	+						neg				neg
Kocuria marina	Actinobacteria	Rare	+	neg						vr				neg
Kocuria palustris	Actinobacteria	Unlikely	+	+	neg					vr				neg	neg
Kocuria polaris	Actinobacteria	Unlikely	+	+
Kocuria rhizophila	Actinobacteria	Unlikely	+	+	neg										neg
Kocuria rosea	Actinobacteria	Unlikely	+	neg						neg				neg
Kocuria salsicia	Actinobacteria	Unlikely	+	neg
Kocuria varians	Actinobacteria	Rare	+	+											neg
Kosakonia cowanii	Proteobacteria	Minor	neg	+				+	neg	neg					+	+
Krasilnikoviella flava	Actinobacteria	Rare	+
Kurthia gibsonii	Firmicutes	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Kurthia massiliensis	Firmicutes	Rare	+
Kurthia senegalensis	Firmicutes	Rare	+
Kurthia sp. Dielmo	Firmicutes	Rare	+
Kurthia zopfii	Firmicutes	Rare	+	neg		+
Kushneria sinocarnis	Firmicutes	Unlikely	neg	+											+
Kytococcus schroeteri	Actinobacteria	Rare	+	neg						neg	neg			neg
Kytococcus sedentarius	Actinobacteria	Rare	+	neg						neg				neg
Labilithrix luteola	Proteobacteria	Non	neg
Lachnoanaerobaculum orale	Firmicutes	Rare	+
Lachnoanaerobaculum saburreum	Firmicutes	Rare	+	+
Lachnoanaerobaculum umeaense	Firmicutes	Rare	+	+
Lachnobacterium bovis	Firmicutes	Rare	+	+
Lachnoclostridium bouchesdurhonense	Firmicutes	Rare	neg
Lachnoclostridium edouardi	Firmicutes	Minor	+
Lachnoclostridium massiliosenegalense	Firmicutes	Rare	+
Lachnoclostridium pacaense	Firmicutes	Rare	vr	neg
Lachnoclostridium phocaeense	Firmicutes	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Lachnoclostridium phytofermentans	Firmicutes	Minor	neg
Lachnoclostridium touaregense	Firmicutes	Rare	+
Lachnospira eligens	Firmicutes	Widespread	+	d(+)											d(+)
Lachnospira multipara	Firmicutes	Rare	+	+											+
Lachnospira pectinoschiza	Firmicutes	Minor	+	neg			+
Lachnospira rogosae	Firmicutes	Moderate
Lacrimispora aerotolerans	Firmicutes	Rare	neg	+											+
Lacrimispora amygdalina	Firmicutes	Rare	+
Lacrimispora celerecrescens	Firmicutes	Rare	+	+
Lacrimispora indolis	Firmicutes	Minor	neg	neg											neg
Lacrimispora saccharolytica	Firmicutes	Moderate	neg
Lacrimispora sphenoides	Firmicutes	Minor	+	+											+
Lacticaseibacillus casei	Firmicutes	Rare	+	+	+		+	neg	neg	neg	neg	neg	neg	+	+
Lacticaseibacillus paracasei	Firmicutes	Minor	+	+	+		+	neg	neg	vr	neg	neg	neg	+	+
Lacticaseibacillus paracasei subsp. tolerans	Firmicutes	Unlikely	+	+	neg		w	neg	neg	neg		neg	neg	+	neg
Lacticaseibacillus paragasseri	Firmicutes	Unlikely	+	+	+		neg	neg	neg	vr		neg	neg	+	+
Lacticaseibacillus rhamnosus	Firmicutes	Moderate	+	+	+		+	neg	neg	+	vr	neg	neg	+	+
Lacticaseibacillus saniviri	Firmicutes	Unlikely	+	+	+		w	w	neg	neg		neg	neg	+	+
Lacticaseibacillus sharpeae	Firmicutes	Unlikely	+	+											+
Lacticaseibacillus zeae	Firmicutes	Unlikely	+	+	+		+	neg	neg	neg		neg	neg	+	+
Lacticigenium naphtae	Firmicutes	Non	vr	+	+				+					+	+
Lactiplantibacillus paraplantarum	Firmicutes	Rare	+	+	+		+	neg	neg	neg		neg	neg	+	+
Lactiplantibacillus pentosus	Firmicutes	Rare	+	+	+		+	neg	neg	d		neg	neg	+	+
Lactiplantibacillus plantarum	Firmicutes	Moderate	+	+	+		d(+)	neg	neg	d(neg)		d(neg)	neg	+	+
Lactiplantibacillus xiangfangensis	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	+	+
Lactobacillus acidophilus	Firmicutes	Widespread	+	+	vr		neg	neg	neg	neg	neg	neg	neg	+	+
Lactobacillus amylolyticus	Firmicutes	Unlikely	+	+											d
Lactobacillus amylovorus	Firmicutes	Minor	+	+	+		neg	neg	neg	neg	vr	neg	neg	+	+
Lactobacillus crispatus	Firmicutes	Moderate	+	+	+		neg	neg	neg	vr	vr	neg	neg	+	+
Lactobacillus delbrueckii subsp. bulgaricus	Firmicutes	Rare	+	+			neg								neg
Lactobacillus delbrueckii subsp. delbrueckii	Firmicutes	Minor	+	+	neg		neg	neg	neg	neg	+	neg	neg	neg	neg
Lactobacillus delbrueckii subsp. lactis	Firmicutes	Unlikely	+	+			neg								d
Lactobacillus equicursoris	Firmicutes	Rare	+	+			neg								+
Lactobacillus gasseri	Firmicutes	Moderate	+	+	vr		neg	neg	neg	neg	vr	neg	neg	vr	+
Lactobacillus gigeriorum	Firmicutes	Unlikely	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Lactobacillus hamsteri	Firmicutes	Rare	+	+						neg					+
Lactobacillus helveticus	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg	+	neg	neg	+	neg
Lactobacillus hominis	Firmicutes	Unlikely	+	+	neg		neg	neg	neg	neg		neg	neg	+	+
Lactobacillus iners	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg	neg	neg	neg	+	neg
Lactobacillus intestinalis	Firmicutes	Unlikely	+	+											neg
Lactobacillus jensenii	Firmicutes	Unlikely	+	+	+		neg	neg	neg	vr	neg	neg	neg	vr	+
Lactobacillus johnsonii	Firmicutes	Minor	+	+	neg		neg	neg	neg	neg	vr	neg	neg	+	+
Lactobacillus kalixensis	Firmicutes	Minor	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Lactobacillus kefiranofaciens	Firmicutes	Rare	+	+			neg	neg	neg	neg		neg	neg	d	d
Lactobacillus leichmannii	Firmicutes	Rare	+	+			neg
Lactobacillus pasteurii	Firmicutes	Unlikely	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Lactobacillus psittaci	Firmicutes	Unlikely	+	+
Lactobacillus rogosae	Firmicutes	Rare	+	neg											neg
Lactobacillus timonensis	Firmicutes	Unlikely	+
Lactobacillus ultunensis	Firmicutes	Minor	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Lactococcus cremoris	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	+	d(neg)
Lactococcus garvieae	Firmicutes	Minor	+	+	+		d(w)	neg	neg	neg	vr	neg	neg	+	+
Lactococcus lactis subsp. lactis	Firmicutes	Widespread	+	+	d(+)		neg	neg	neg	neg	vr	neg	neg	+	d(+)
Lactococcus petauri	Firmicutes	Rare	+	+	+		d			neg		neg		+	+
Lactococcus plantarum	Firmicutes	Rare	+	+	+		neg	neg	neg	neg	+	neg	neg	+	+
Lactococcus raffinolactis	Firmicutes	Minor	+	+	+		neg	neg	neg	d(w)	neg	neg	neg	+	+
Lactonifactor longoviformis	Firmicutes	Minor	neg
Lacunisphaera limnophila	Verrucomicrobia	Unlikely	neg
Lagierella massiliensis	Firmicutes	Rare	+	+	+
Lancefieldella parvula	Actinobacteria	Minor	+	+											d
Lancefieldella rimae	Actinobacteria	Minor	+	+											d
Lapidilactobacillus dextrinicus	Firmicutes	Non	+	+			+			neg					+
Laribacter hongkongensis	Proteobacteria	Rare	neg	neg
Lascolabacillus massiliensis	Bacteroidetes	Rare	neg
Latilactobacillus curvatus	Firmicutes	Minor	+	+	neg		neg	neg	neg	neg	neg	neg	neg	+	d(neg)
Latilactobacillus sakei	Firmicutes	Minor	+	+	neg		+	neg	neg	neg	neg	neg	neg	+	d(+)
Latilactobacillus sakei subsp. carnosus	Firmicutes	Rare	+	+	neg		+			neg					w
Lautropia mirabilis	Proteobacteria	Minor	neg	+							neg				neg
Lawsonella clevelandensis	Actinobacteria	Rare	vr
Lawsonia intracellularis	Proteobacteria	Unlikely	neg
Lawsonibacter asaccharolyticus	Firmicutes	Moderate	+	w											neg
Leclercia adecarboxylata	Proteobacteria	Rare	neg	+	+		+	+	neg	neg		neg	neg		+	d
Lederbergia galactosidilyticus	Firmicutes	Rare	+	+	d		neg	neg	neg	d		neg	neg	+	d
Lederbergia lentus	Firmicutes	Unlikely	+	w	w		neg	neg	neg			d	w	+	w
Legionella bozemanae	Proteobacteria	Non	neg
Legionella pneumophila	Proteobacteria	Non	neg
Lelliottia amnigena	Proteobacteria	Rare	neg	+						d(neg)					+
Lelliottia nimipressuralis	Proteobacteria	Rare	neg	+						+					+	+
Leminorella grimontii	Proteobacteria	Rare	neg	+					neg	neg					neg	+
Leminorella richardii	Proteobacteria	Rare	neg	+					neg	neg					neg	w
Lentibacillus massiliensis	Firmicutes	Rare	+
Lentibacillus timonensis	Firmicutes	Rare	+	+	neg			neg	neg	neg		neg	neg	neg	neg
Lentilactobacillus buchneri subsp. buchneri	Firmicutes	Minor	+	+	neg		vr	neg	vr	vr	neg	neg	neg	neg	neg
Lentilactobacillus diolivorans	Firmicutes	Unlikely	+	+			+	neg	+	+		neg	+	neg	neg
Lentilactobacillus farraginis	Firmicutes	Unlikely	+	+			w								neg
Lentilactobacillus hilgardii	Firmicutes	Rare	+	+	neg		+	neg	neg	neg		neg	neg	neg	neg
Lentilactobacillus kefiri	Firmicutes	Non	+	+	neg		+	vr	neg	neg		neg	neg	neg	neg
Lentilactobacillus kisonensis	Firmicutes	Unlikely	+	neg	neg		neg	neg	neg	neg		neg	+		neg
Lentilactobacillus otakiensis	Firmicutes	Unlikely	+	+	neg		w	neg	neg	neg		neg	neg	neg	neg
Lentilactobacillus parabuchneri	Firmicutes	Rare	+	+	neg		d		d	neg	neg	neg	neg	neg	neg
Lentilactobacillus parafarraginis	Firmicutes	Unlikely	+	+			w								neg
Lentilactobacillus senioris	Firmicutes	Unlikely	+	+	neg		d	neg	neg	neg		neg	neg	w	neg
Leptospira interrogans	Spirochaetes	Non	neg
Leptotrichia amnionii	Fusobacteria	Rare	neg
Leptotrichia buccalis	Fusobacteria	Rare	neg	+	+		neg	neg	neg	neg	vr	neg	neg	neg	+
Leptotrichia hofstadii	Fusobacteria	Rare	neg
Leptotrichia hongkongensis	Fusobacteria	Rare	vr	neg
Leptotrichia massiliensis	Fusobacteria	Rare	+
Leptotrichia shahii	Fusobacteria	Rare	neg
Leptotrichia wadei	Fusobacteria	Rare	neg
Leucobacter aridicollis	Actinobacteria	Unlikely	+
Leuconostoc carnosum	Firmicutes	Unlikely	+	+	neg		neg			+					neg
Leuconostoc citreum	Firmicutes	Minor	+	+	d(+)		d(+)	d(neg)	neg	+	neg	neg	neg	+	d(+)
Leuconostoc gelidum	Firmicutes	Rare	+	+	+		neg	neg	neg	+		neg	neg	neg	+
Leuconostoc gelidum subsp. gasicomitatum	Firmicutes	Non	+	+	neg		d	neg	+	+		neg	neg	+	neg
Leuconostoc holzapfelii	Firmicutes	Rare	+	+	neg		+	neg	neg	+		neg	neg	+	neg
Leuconostoc inhae	Firmicutes	Unlikely	+	+	neg		d	neg	neg	+		neg	neg	+	d
Leuconostoc kimchii	Firmicutes	Rare	+	+			+								+
Leuconostoc lactis	Firmicutes	Minor	+	+	neg		neg	neg	neg	d		neg	neg	+	neg
Leuconostoc mesenteroides subsp. cremoris	Firmicutes	Rare	+	+	d										neg
Leuconostoc mesenteroides subsp. mesenteroides	Firmicutes	Minor	+	+	vr		neg	neg	neg	+	neg	neg	neg	+	d
Leuconostoc pseudomesenteroides	Firmicutes	Unlikely	+	+	d(neg)		d	d(neg)	d(neg)	+		neg		+	d
Levilactobacillus brevis	Firmicutes	Minor	+	+	neg		vr	neg	vr	neg	neg	neg	neg	vr	neg
Levilactobacillus brevis subsp. gravesensis	Firmicutes	Unlikely	+	+
Levilactobacillus namurensis	Firmicutes	Unlikely	+	+	neg		+	neg	neg	neg		neg	+	+	neg
Levilactobacillus parabrevis	Firmicutes	Unlikely	+	+	neg		+	neg	neg	d		neg	+	+	neg
Levyella massiliensis	Firmicutes	Rare	+	+											neg
Ligilactobacillus acidipiscis	Firmicutes	Unlikely	+	+	+		neg			neg					d
Ligilactobacillus agilis	Firmicutes	Rare	+	+	+		neg	neg	neg	neg	neg	neg	neg	+	+
Ligilactobacillus animalis	Firmicutes	Minor	+	+	+		neg	neg	neg	neg	neg	neg	neg	+	+
Ligilactobacillus ceti	Firmicutes	Unlikely	+	neg	neg			neg	+	neg		neg	neg	neg	neg
Ligilactobacillus equi	Firmicutes	Unlikely	+	+	d(neg)		neg	neg	neg	neg		neg	neg	d	d(neg)
Ligilactobacillus murinus	Firmicutes	Rare	+				neg
Ligilactobacillus pobuzihii	Firmicutes	Unlikely	+	+	neg				+			neg	neg	+
Ligilactobacillus ruminis	Firmicutes	Widespread	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Ligilactobacillus salivarius	Firmicutes	Widespread	+	+	neg		neg	neg	neg	neg	neg	neg	neg	+	neg
Limnobacter thiooxidans	Proteobacteria	Unlikely	neg
Limnochorda pilosa	Firmicutes	Unlikely	neg
Limosilactobacillus antri	Firmicutes	Rare	+	+	neg		+	neg	neg	w	neg	neg	neg	neg	neg
Limosilactobacillus caccae	Firmicutes	Rare	+		neg					+		+		+	+
Limosilactobacillus coleohominis	Firmicutes	Unlikely	+	neg	neg		neg	neg	neg	neg	neg	neg	neg	neg	neg
Limosilactobacillus fermentum	Firmicutes	Widespread	+	vr	neg		vr	neg	vr	neg	neg	neg	neg	neg	neg
Limosilactobacillus frumenti	Firmicutes	Non	+	+	+		+		d			d		+	+
Limosilactobacillus gastricus	Firmicutes	Unlikely	+	+	+		+	neg	neg	+	neg	neg	neg	d	+
Limosilactobacillus ingluviei	Firmicutes	Non	+	d	neg		d	neg	neg	neg		neg	+	neg	neg
Limosilactobacillus mucosae	Firmicutes	Rare	+	+	neg		+	vr	vr	neg	neg	neg	+	neg	neg
Limosilactobacillus oris	Firmicutes	Minor	+	+	neg		+	neg	neg	neg		neg	neg	neg	neg
Limosilactobacillus reuteri	Firmicutes	Minor	+	+	neg		vr	neg	neg	neg	neg	neg	neg	neg	neg
Limosilactobacillus vaginalis	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg	neg	neg	neg	neg	neg
Limosilactobacillus walteri	Firmicutes	Rare	+	+
Liquorilactobacillus mali	Firmicutes	Unlikely	+	+	+				neg	d		neg		+
Liquorilactobacillus satsumensis	Firmicutes	Non	+	+			d								+
Liquorilactobacillus vini	Firmicutes	Unlikely	+	+	neg		neg	neg	neg	neg		neg	neg	+	+
Listeria floridensis	Firmicutes	Rare	+	+	+		neg	neg	neg	+		neg	neg	+	+
Listeria grayi	Firmicutes	Rare	+	+	d		d	neg	+	+	+	+	neg	d	+
Listeria innocua	Firmicutes	Rare	+	+	d		neg	neg	d	+	+	+	neg	d	+
Listeria ivanovii	Firmicutes	Rare	+	+	+		neg	neg	+	+	+	neg	neg	+	+
Listeria marthii	Firmicutes	Rare	+	+						+
Listeria monocytogenes	Firmicutes	Rare	+	+	+		neg	neg	d	+	+	+	neg	+	+
Listeria seeligeri	Firmicutes	Rare	+	+			d		+	+	+	d(neg)			+
Listeria welshimeri	Firmicutes	Rare	+	+	+		neg	neg	+	+	+	+	neg	+	w(+)
Litchfieldia alkalitelluris	Firmicutes	Rare	+	neg			neg		+						neg
Loigolactobacillus bifermentans	Firmicutes	Unlikely	+	+			neg								neg
Loigolactobacillus coryniformis	Firmicutes	Minor	+	+	neg		+	neg	neg	neg		neg	neg	+	+
Loigolactobacillus coryniformis subsp. torquens	Firmicutes	Unlikely	+				+
Longicatena caecimuris	Firmicutes	Rare	+	+
Lutispora thermophila	Firmicutes	Unlikely	neg
Luxibacter massiliensis	Firmicutes	Rare	+	+	+		neg	+	+	neg		neg	+	neg	+
Lysinibacillus boronitolerans	Firmicutes	Rare	+	neg	neg		neg	neg		neg		neg	neg	+	neg
Lysinibacillus fusiformis	Firmicutes	Rare	vr	neg
Lysinibacillus macroides	Firmicutes	Unlikely	vr	neg										neg
Lysinibacillus meyeri	Firmicutes	Unlikely	+	neg	neg		+	neg	+	neg		neg	neg	neg	neg
Lysinibacillus sphaericus	Firmicutes	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	vr	neg
Lysinibacillus varians	Firmicutes	Rare	+
Lysinibacillus xylanilyticus	Firmicutes	Rare	+	neg	neg		neg	neg		neg		neg	neg		neg
Lysobacter soli	Proteobacteria	Rare	neg				neg			neg					neg
Macellibacteroides fermentans	Bacteroidetes	Rare	+	+											neg
Macrococcus caseolyticus	Firmicutes	Unlikely	+	+											neg
Mageeibacillus indolicus	Firmicutes	Rare	vr	neg
Mahella australiensis	Firmicutes	Unlikely	+	+
Mailhella massiliensis	Proteobacteria	Rare	neg
Mameliella alba	Proteobacteria	Unlikely	neg	neg
Mammaliicoccus fleurettii	Firmicutes	Rare	+	+											neg
Mammaliicoccus lentus	Firmicutes	Rare	+	+	+		+								+
Mammaliicoccus sciuri	Firmicutes	Rare	+	+										+
Mammaliicoccus vitulinus	Firmicutes	Unlikely	+	vr						+	+			neg	d(+)
Mannheimia granulomatis	Proteobacteria	Rare	neg	+	d										d
Mannheimia haemolytica	Proteobacteria	Rare	neg	+	neg										neg
Mannheimia succiniciproducens	Proteobacteria	Rare	neg
Marasmitruncus massiliensis	Firmicutes	Rare	+
Marseilla massiliensis	Bacteroidetes	Rare	neg
Marseillibacter massiliensis	Firmicutes	Rare	neg
Marvinbryantia formatexigens	Firmicutes	Moderate	+	+
Massilia aurea	Proteobacteria	Unlikely	neg	neg
Massilia brevitalea	Proteobacteria	Non	neg
Massilia haematophila	Proteobacteria	Rare	neg	neg
Massilia norwichensis	Proteobacteria	Unlikely	neg
Massilia timonae	Proteobacteria	Non	neg	w
Massilia varians	Proteobacteria	Unlikely	neg	neg
Massilibacillus massiliensis	Firmicutes	Rare	+
Massilibacterium senegalense	Firmicutes	Rare	neg	neg	+		neg	neg	neg	neg		neg	neg	+	+
Massilicoli timonensis	Firmicutes	Rare	neg	+	+		neg	neg	+	neg		+	neg	+	+
Massiliimalia massiliensis	Firmicutes	Rare	neg	+
Massiliimalia timonensis	Firmicutes	Minor	+	neg
Massilimicrobiota timonensis	Firmicutes	Moderate	neg	+	+		+	neg	+	neg		+		neg	+
Massilioclostridium coli	Firmicutes	Moderate	neg	neg	neg				+
Massiliprevotella massiliensis	Bacteroidetes	Rare	neg
Massilistercora timonensis	Firmicutes	Rare	neg	+	neg		neg	neg	+	d			d	+
Mediterranea massiliensis	Bacteroidetes	Rare	neg	+					+
Mediterraneibacter faecis	Firmicutes	Minor	+	+											neg
Mediterraneibacter glycyrrhizinilyticus	Firmicutes	Minor	+	+											neg
Mediterraneibacter massiliensis	Firmicutes	Rare	+	+	+		neg	+	neg	+		neg	neg	neg	+
Megalodesulfovibrio gigas	Proteobacteria	Unlikely	neg
Megamonas funiformis	Firmicutes	Minor	neg	+											+
Megamonas hypermegale	Firmicutes	Moderate	neg	+											d
Megamonas rupellensis	Firmicutes	Rare	neg	+											+
Megasphaera cerevisiae	Firmicutes	Rare	neg	neg													+
Megasphaera elsdenii	Firmicutes	Moderate	neg	+			+								neg
Megasphaera indica	Firmicutes	Rare	neg
Megasphaera massiliensis	Firmicutes	Rare	neg	+	+		+	w	+					+	+
Megasphaera micronuciformis	Firmicutes	Minor	neg	neg											neg
Megasphaera stantonii	Firmicutes	Rare	neg
Meiothermus silvanus	Deinococcus-Thermus	Unlikely	neg
Merdibacter massiliensis	Firmicutes	Rare	neg
Merdimonas faecis	Firmicutes	Rare	+	neg
Mesobacillus jeotgali	Firmicutes	Rare	vr	+	neg		neg	neg	d	neg		neg	neg	neg	neg
Mesobacillus subterraneus	Firmicutes	Rare	neg
Mesorhizobium australicum	Proteobacteria	Unlikely	neg
Mesorhizobium jarvisii	Proteobacteria	Unlikely	neg	+						neg		neg	neg	w	neg
Mesorhizobium loti	Proteobacteria	Rare	neg	neg
Mesorhizobium muleiense	Proteobacteria	Unlikely	neg
Mesosutterella multiformis	Proteobacteria	Rare	neg
Metabacillus galliciensis	Firmicutes	Unlikely	+	neg											neg
Metabacillus idriensis	Firmicutes	Rare	+	+	+		+		+	+				+	+
Metabacillus litoralis	Firmicutes	Rare	vr	+
Metabacillus niabensis	Firmicutes	Rare	+	+
Metakosakonia massiliensis	Proteobacteria	Rare	neg	+
Metamycoplasma anseris	Tenericutes	Unlikely	unk
Metaprevotella massiliensis	Bacteroidetes	Rare	neg
Methanobrevibacter arboriphilus	Euryarchaeota	Rare	+
Methanobrevibacter millerae	Euryarchaeota	Rare	+
Methanobrevibacter oralis	Euryarchaeota	Rare	+
Methanobrevibacter ruminantium	Euryarchaeota	Rare	+
Methanobrevibacter smithii	Euryarchaeota	Moderate	+
Methanococcus voltae	Euryarchaeota	Rare	neg
Methanomassiliicoccus intestinalis	Euryarchaeota	Rare	+
Methanomassiliicoccus luminyensis	Candidatus Thermoplasmatota	Rare	+
Methanomethylophilus alvus	Candidatus Thermoplasmatota	Rare
Methanosphaera stadtmanae	Euryarchaeota	Minor	+
Methylibium petroleiphilum	Proteobacteria	Unlikely	neg
Methylobacterium adhaesivum	Proteobacteria	Unlikely	neg	+
Methylobacterium brachiatum	Proteobacteria	Unlikely	neg
Methylobacterium jeotgali	Proteobacteria	Non	neg	neg			neg	neg	neg	neg		neg	neg	neg	neg
Methylobacterium mesophilicum	Proteobacteria	Non	neg	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Methylobacterium organophilum	Proteobacteria	Unlikely	neg
Methylobacterium oryzae	Proteobacteria	Unlikely	neg
Methylobacterium phyllosphaerae	Proteobacteria	Unlikely	neg	neg
Methylobacterium radiotolerans	Proteobacteria	Non	neg	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Methylomusa anaerophila	Firmicutes	Unlikely	neg	neg											neg
Methylorubrum aminovorans	Proteobacteria	Rare	neg	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Methylorubrum extorquens	Proteobacteria	Non	neg	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Methylorubrum populi	Proteobacteria	Unlikely	neg
Methylorubrum thiocyanatum	Proteobacteria	Unlikely	neg	w	neg		neg	neg	neg	neg		neg	neg	neg	neg
Methylorubrum zatmanii	Proteobacteria	Unlikely	neg	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Methyloversatilis discipulorum	Proteobacteria	Rare	neg
Methyloversatilis universalis	Proteobacteria	Rare	neg	neg
Microbacterium aurum	Actinobacteria	Rare	+	w						neg	neg
Microbacterium chocolatum	Actinobacteria	Unlikely	+	neg
Microbacterium deminutum	Actinobacteria	Unlikely	+
Microbacterium esteraromaticum	Actinobacteria	Unlikely	+
Microbacterium foliorum	Actinobacteria	Unlikely	+	neg	+		neg	neg	neg	d		d	d		+
Microbacterium ginsengisoli	Actinobacteria	Non	+				neg	neg	neg	neg			neg	neg	neg
Microbacterium gubbeenense	Actinobacteria	Unlikely	+	+
Microbacterium hydrocarbonoxydans	Actinobacteria	Unlikely	+	neg
Microbacterium kitamiense	Actinobacteria	Unlikely	+	+											neg
Microbacterium lacticum	Actinobacteria	Unlikely	+	+	+		neg	neg	neg	neg	neg	neg	neg	+	+
Microbacterium liquefaciens	Actinobacteria	Unlikely	+	+
Microbacterium luteolum	Actinobacteria	Non	+	neg
Microbacterium maritypicum	Actinobacteria	Unlikely	+	+
Microbacterium mitrae	Actinobacteria	Unlikely	+	neg
Microbacterium natoriense	Actinobacteria	Unlikely	+	+	+		neg	neg	neg	+			neg	+	+
Microbacterium oleivorans	Actinobacteria	Unlikely	+	neg
Microbacterium oxydans	Actinobacteria	Unlikely	+	+											+
Microbacterium paraoxydans	Actinobacteria	Rare	+	+											neg
Microbacterium phyllosphaerae	Actinobacteria	Unlikely	+	neg	+		neg	neg	neg	d		d	d		+
Microbacterium saccharophilum	Actinobacteria	Unlikely	+
Microbacterium schleiferi	Actinobacteria	Unlikely	+	neg
Microbacterium sediminicola	Actinobacteria	Unlikely	+
Microbacterium testaceum	Actinobacteria	Non	+	+
Microbispora rosea	Actinobacteria	Rare	+
Micrococcus cohnii	Actinobacteria	Unlikely	+	+
Micrococcus endophyticus	Actinobacteria	Unlikely	+	+	+		neg	neg	+	+		neg	neg	+	neg
Micrococcus luteus	Actinobacteria	Minor	+	+	+		neg	neg	+	+	neg		neg	neg	+
Micrococcus lylae	Actinobacteria	Rare	+	+	neg		neg	neg	+	neg		neg	neg	neg	+
Micrococcus terreus	Actinobacteria	Rare	+
Microlunatus phosphovorus	Actinobacteria	Unlikely	+
Micromonospora aurantiaca	Actinobacteria	Rare	+	neg
Micropruina glycogenica	Actinobacteria	Rare	+	+
Microvirga aerophila	Proteobacteria	Unlikely	neg	neg
Microvirga massiliensis	Proteobacteria	Rare	neg	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Microvirgula aerodenitrificans	Proteobacteria	Unlikely	neg
Millionella massiliensis	Bacteroidetes	Rare	neg
Miniphocaeibacter massiliensis	Firmicutes	Rare	+
Mitsuokella jalaludinii	Firmicutes	Minor	neg	+	+		neg	neg	+	neg		neg	neg	neg	+
Mitsuokella multacida	Firmicutes	Moderate	neg	+	+		+	neg	+	neg		neg	neg	neg	+
Mixta calida	Proteobacteria	Rare	neg	+	+		+	+	+	neg		neg	neg	+	+
Mixta intestinalis	Proteobacteria	Rare	neg
Mobilibacterium massiliense	Firmicutes	Rare	neg
Mobilibacterium timonense	Firmicutes	Rare	neg
Mobilicoccus massiliensis	Actinobacteria	Rare	+
Mobiluncus curtisii	Actinobacteria	Rare	vr	w							neg				neg
Moellerella wisconsensis	Proteobacteria	Rare	neg	+					neg	neg					neg
Mogibacterium diversum	Firmicutes	Rare	+
Mogibacterium neglectum	Firmicutes	Rare	+
Mogibacterium pumilum	Firmicutes	Rare	+
Mogibacterium timidum	Firmicutes	Rare	+	neg											neg
Mogibacterium vescum	Firmicutes	Unlikely	+
Monoglobus pectinilyticus	Firmicutes	Minor	+
Moorella glycerini	Firmicutes	Unlikely	+
Moraxella catarrhalis	Proteobacteria	Unlikely	neg	neg							neg			neg
Moraxella osloensis	Proteobacteria	Unlikely	neg	vr
Mordavella massiliensis	Firmicutes	Rare	neg
Morganella morganii	Proteobacteria	Minor	neg	+					neg	neg		neg	neg		neg
Moryella indoligenes	Firmicutes	Rare	+	vr											neg
Mucispirillum schaedleri	Deferribacteres	Rare	neg
Murdochiella asaccharolytica	Firmicutes	Rare	+	neg
Murdochiella massiliensis	Firmicutes	Rare	+	+					+					+
Murdochiella vaginalis	Firmicutes	Rare	+	+	neg		neg	neg	+	neg		neg	neg	neg	neg
Muribaculum gordoncarteri	Bacteroidetes	Unlikely	neg	+
Muribaculum intestinale	Bacteroidetes	Minor	neg	neg											neg
Murimonas intestini	Firmicutes	Rare	+
Mycobacterium abscessus	Actinobacteria	Unlikely	vr	neg
Mycobacterium avium	Actinobacteria	Unlikely	vr	neg
Mycobacterium avium subsp. paratuberculosis	Actinobacteria	Unlikely	vr
Mycobacterium colombiense	Actinobacteria	Rare	vr
Mycobacterium florentinum	Actinobacteria	Rare	vr
Mycobacterium fortuitum	Actinobacteria	Rare	vr	+
Mycobacterium gastri	Actinobacteria	Rare	vr
Mycobacterium gordonae	Actinobacteria	Rare	vr	+
Mycobacterium interjectum	Actinobacteria	Rare	vr
Mycobacterium kansasii	Actinobacteria	Unlikely	vr
Mycobacterium lentiflavum	Actinobacteria	Rare	vr
Mycobacterium simiae	Actinobacteria	Rare	vr
Mycobacterium terrae	Actinobacteria	Rare	vr
Mycobacterium tuberculosis	Actinobacteria	Non	vr
Mycobacterium tuberculosis variant africanum	Actinobacteria	Non	vr
Mycobacterium tuberculosis variant bovis	Actinobacteria	Unlikely	+
Mycobacteroides abscessus subsp. bolletii	Actinobacteria	Unlikely	+
Mycolicibacterium aubagnense	Actinobacteria	Non	+	neg
Mycolicibacterium cosmeticum	Actinobacteria	Unlikely	vr
Mycolicibacterium houstonense	Actinobacteria	Rare	+	+											neg
Mycolicibacterium mageritense	Actinobacteria	Unlikely	+
Mycolicibacterium neoaurum	Actinobacteria	Rare	+
Mycoplasma hominis	Tenericutes	Rare	neg								neg
Mycoplasma muris	Tenericutes	Rare	neg	neg
Mycoplasma pneumoniae	Tenericutes	Rare	neg
Mycoplasmopsis arginini	Tenericutes	Unlikely	neg
Mycoplasmopsis californica	Tenericutes	Unlikely	neg
Myroides odoratimimus	Bacteroidetes	Unlikely	neg
Myroides odoratus	Bacteroidetes	Unlikely	neg
Nakamurella multipartita	Actinobacteria	Unlikely	+
Nanosynbacter lyticus	Candidatus Saccharibacteria	Unlikely	+
Natronorubrum bangense	Euryarchaeota	Non	neg
Nautilia nitratireducens	Proteobacteria	Unlikely	neg
Ndongobacter massiliensis	Firmicutes	Unlikely	neg
Necropsobacter rosorum	Proteobacteria	Rare	neg	+	neg										neg	neg
Negativibacillus massiliensis	Firmicutes	Minor	neg	+	+				+
Negativicoccus massiliensis	Firmicutes	Rare	neg
Negativicoccus succinicivorans	Firmicutes	Rare	neg
Neglecta timonensis	Firmicutes	Rare	+
Neisseria bacilliformis	Proteobacteria	Rare	neg	neg
Neisseria canis	Proteobacteria	Rare	neg	neg	neg		neg	neg	neg	neg		neg		neg	neg
Neisseria cinerea	Proteobacteria	Minor	neg	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Neisseria elongata	Proteobacteria	Minor	neg	d	neg		neg	neg	neg	neg		neg	neg	neg	neg
Neisseria flava	Proteobacteria	Rare	neg	+	neg			neg	neg	neg		neg		neg	neg
Neisseria flavescens	Proteobacteria	Minor	neg	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Neisseria gonorrhoeae	Proteobacteria	Non	neg	d(+)	neg		neg	neg	neg	neg		neg		neg	neg
Neisseria lactamica	Proteobacteria	Rare	neg	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Neisseria macacae	Proteobacteria	Rare	neg	+	neg			neg	neg	neg		neg		neg	neg
Neisseria meningitidis	Proteobacteria	Unlikely	neg	d	neg		neg	neg	neg	neg		neg		neg	neg
Neisseria mucosa	Proteobacteria	Rare	neg	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Neisseria oralis	Proteobacteria	Rare	neg	+											neg
Neisseria perflava	Proteobacteria	Rare	neg	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Neisseria polysaccharea	Proteobacteria	Rare	neg	+
Neisseria shayeganii	Proteobacteria	Rare	neg	+											neg
Neisseria sicca	Proteobacteria	Rare	neg	+	neg		d	neg	neg	neg		neg		neg	neg
Neisseria subflava	Proteobacteria	Rare	neg	+	neg		neg	neg	neg	neg		neg		neg	neg
Neoactinobaculum massilliense	Actinobacteria	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Neobacillus bataviensis	Firmicutes	Rare	+	+	d		neg	neg	neg	d		d		+	w
Neobacillus fumarioli	Firmicutes	Unlikely	+	+	neg		neg	neg	neg	d		neg	neg	w	neg
Neobacillus jeddahensis	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	+	neg
Neobacillus massiliamazoniensis	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	+	neg
Neobacillus niacini	Firmicutes	Rare	+	+	d(+)		neg	neg	neg			d(+)	d(+)	+	d(+)
Neobacillus pocheonensis	Firmicutes	Unlikely	+	neg
Neobacillus soli	Firmicutes	Rare	+	+	neg			neg	neg	neg			neg	+	neg
Neobittarella massiliensis	Firmicutes	Moderate	+
Neofamilia massiliensis	Firmicutes	Rare
Nesterenkonia massiliensis	Actinobacteria	Rare	+	+											neg
Nevskia ramosa	Proteobacteria	Unlikely	neg	neg
Niallia nealsonii	Firmicutes	Rare	+	+	+		+	+	neg	+		neg	neg	+	+
Niameybacter massiliensis	Firmicutes	Rare	+
Nigerium massiliense	Actinobacteria	Rare	+
Nitriliruptor alkaliphilus	Actinobacteria	Unlikely	+
Nitrosomonas eutropha	Proteobacteria	Rare	neg
Nocardia asteroides	Actinobacteria	Rare	+		+
Nocardia brevicatena	Actinobacteria	Rare	+		neg
Nocardia cyriacigeorgica	Actinobacteria	Rare	+
Nocardia mangyaensis	Actinobacteria	Unlikely	+
Nocardia otitidiscaviarum	Actinobacteria	Rare	+
Nocardioides jensenii	Actinobacteria	Unlikely	+
Nocardioides kribbensis	Actinobacteria	Unlikely	+
Nocardioides massiliensis	Actinobacteria	Unlikely	+	neg	neg			neg	neg	neg		neg	neg
Nosocomiicoccus massiliensis	Firmicutes	Rare	+	neg
Noviherbaspirillum massiliense	Proteobacteria	Rare	neg	neg
Novosphingobium capsulatum	Proteobacteria	Unlikely	neg	+		+									neg
Numidum massiliense	Firmicutes	Rare	+	+
Obesumbacterium proteus	Proteobacteria	Rare	neg	+
Oceanidesulfovibrio marinus	Proteobacteria	Unlikely	neg
Oceanithermus profundus	Deinococcus-Thermus	Unlikely	neg
Oceanobacillus caeni	Firmicutes	Rare	+	+										+
Oceanobacillus iheyensis	Firmicutes	Unlikely	+	+
Oceanobacillus jeddahense	Firmicutes	Rare	+	+
Oceanobacillus manasiensis	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	neg
Oceanobacillus massiliensis	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	+	+
Oceanobacillus oncorhynchi	Firmicutes	Non	+	+
Oceanobacillus picturae	Firmicutes	Unlikely	+	w					neg					w
Oceanobacillus senegalensis	Firmicutes	Unlikely	+
Oceanobacillus sojae	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Oceanobacillus timonensis	Firmicutes	Unlikely	+
Ochrobactrum anthropi	Proteobacteria	Unlikely	neg	neg		+
Ochrobactrum intermedium	Proteobacteria	Unlikely	neg	neg		+
Odoribacter laneus	Bacteroidetes	Minor	neg	neg											neg
Odoribacter massiliensis	Bacteroidetes	Minor
Odoribacter splanchnicus	Bacteroidetes	Widespread	neg
Oenococcus oeni	Firmicutes	Unlikely	+	+											d(+)
Oerskovia turbata	Actinobacteria	Rare	+	+						+			+		+
Okadaella gastrococcus	Firmicutes	Rare	neg
Olegusella massiliensis	Actinobacteria	Rare	+	+					+					+
Oleidesulfovibrio alaskensis	Proteobacteria	Rare	neg
Oleidesulfovibrio vietnamensis	Proteobacteria	Rare	neg
Oligella urethralis	Proteobacteria	Rare	neg	neg
Olsenella congonensis	Actinobacteria	Rare	+
Olsenella massiliensis	Actinobacteria	Rare	+	+
Olsenella phocaeensis	Actinobacteria	Rare	+
Olsenella profusa	Actinobacteria	Rare	+	+											+
Olsenella timonensis	Actinobacteria	Rare	+
Olsenella uli	Actinobacteria	Rare	+	+											d
Olsenella urininfantis	Actinobacteria	Rare	+
Oribacterium asaccharolyticum	Firmicutes	Rare	vr
Oribacterium parvum	Firmicutes	Rare	vr	+											neg
Oribacterium sinus	Firmicutes	Minor	vr	+											neg
Ornithinibacillus contaminans	Firmicutes	Unlikely	+	+
Ornithinibacillus massiliensis	Firmicutes	Rare	+
Ornithobacterium rhinotracheale	Bacteroidetes	Rare	neg	d(+)										+
Oscillibacter massiliensis	Firmicutes	Rare	neg
Oscillibacter ruminantium	Firmicutes	Rare	neg	+			neg
Oscillibacter valericigenes	Firmicutes	Minor	neg	+			neg								neg
Oscillospira guillermondii	Firmicutes	Rare	+
Ottowia massiliensis	Pseudomonadota	Rare	neg
Oxalobacter formigenes	Proteobacteria	Moderate	neg
Pacaella massiliensis	Synergistetes	Rare	neg
Paenarthrobacter aurescens	Actinobacteria	Rare	+
Paenarthrobacter ilicis	Actinobacteria	Non	+	+
Paenibacillus alvei	Firmicutes	Unlikely	+	+	d(+)		neg	neg	neg	neg		neg	neg	+	+
Paenibacillus amylolyticus	Firmicutes	Rare	+	+
Paenibacillus anaericanus	Firmicutes	Rare	neg	+	+		neg	neg	neg	+		neg	+	+	+
Paenibacillus antibioticophila	Firmicutes	Rare	+	+	+		neg	neg	neg				+	+	+
Paenibacillus azoreducens	Firmicutes	Rare	vr	+											+
Paenibacillus barcinonensis	Firmicutes	Unlikely	+	+	+		+	neg	neg	neg		neg	+	+	+
Paenibacillus barengoltzii	Firmicutes	Unlikely	+	neg				neg	neg
Paenibacillus borealis	Firmicutes	Unlikely	neg	+	+		neg	neg	neg	d(+)		neg	+	+	+
Paenibacillus bouchesdurhonensis	Firmicutes	Rare	neg	+
Paenibacillus chibensis	Firmicutes	Unlikely	+	+											+
Paenibacillus chitinolyticus	Firmicutes	Rare	vr	+
Paenibacillus cineris	Firmicutes	Rare	vr	+	+		neg	neg	neg	+		w	+	+	+
Paenibacillus cookii	Firmicutes	Unlikely	vr	+	+		d	neg	d	+		d	+	d	+
Paenibacillus daejeonensis	Firmicutes	Rare	vr	neg
Paenibacillus dendritiformis	Firmicutes	Rare	neg	+
Paenibacillus donghaensis	Firmicutes	Unlikely	+	+	+		neg	neg	neg	neg		neg	+	neg	+
Paenibacillus durus	Firmicutes	Rare	+	+
Paenibacillus faecis	Firmicutes	Rare	+	+	+		+			+			+	+	+
Paenibacillus favisporus	Firmicutes	Rare	vr	+
Paenibacillus glucanolyticus	Firmicutes	Rare	neg	+											+
Paenibacillus graminis	Firmicutes	Unlikely	+	+	+		+	neg	neg	+		neg	+	+	+
Paenibacillus ihuae	Firmicutes	Rare	+
Paenibacillus ihumii	Firmicutes	Rare	neg	+	+		neg	neg	neg	+		neg	+	+	+
Paenibacillus illinoisensis	Firmicutes	Rare	+	+											+
Paenibacillus jamilae	Firmicutes	Rare	vr	+	+		neg	neg	neg				neg	neg	+
Paenibacillus kribbensis	Firmicutes	Rare	vr	+	+		w	neg	neg	w		w	+	w	+
Paenibacillus lactis	Firmicutes	Rare	neg	+	+		d	neg	neg	d		neg	d	d	d
Paenibacillus larvae	Firmicutes	Rare	+	+	neg		neg	neg	neg			neg	neg	+
Paenibacillus lautus	Firmicutes	Rare	vr	+	+		neg	neg	neg	+		+	+	+	+
Paenibacillus macerans	Firmicutes	Rare	+	+	+		+	d	neg	+		d	+	d	+
Paenibacillus motobuensis	Firmicutes	Rare	neg
Paenibacillus mucilaginosus	Firmicutes	Unlikely	neg	+
Paenibacillus naphthalenovorans	Firmicutes	Unlikely	+	+	neg		neg	neg	neg	d		neg	neg	neg	neg
Paenibacillus odorifer	Firmicutes	Unlikely	+	+
Paenibacillus pabuli	Firmicutes	Rare	+	+
Paenibacillus pasadenensis	Firmicutes	Rare	+	neg
Paenibacillus phocaensis	Firmicutes	Rare	neg	+	neg		+	+	neg	+		neg	neg	+	+
Paenibacillus polymyxa	Firmicutes	Rare	neg	+	+		+	neg	neg	+			+	neg	+
Paenibacillus provencensis	Firmicutes	Rare	neg	+	w		w	neg	neg	w		neg	w	+	+
Paenibacillus pueri	Firmicutes	Rare	+	+	+		+		+	neg		neg	neg		+
Paenibacillus rhizosphaerae	Firmicutes	Unlikely	+	+
Paenibacillus riograndensis	Firmicutes	Unlikely	vr	+
Paenibacillus rubinfantis	Firmicutes	Rare	neg	+
Paenibacillus sabinae	Firmicutes	Rare	+	neg
Paenibacillus senegalensis	Firmicutes	Rare	neg	+	+									+
Paenibacillus senegalimassiliensis	Firmicutes	Rare	vr	+
Paenibacillus stellifer	Firmicutes	Unlikely	+
Paenibacillus thiaminolyticus	Firmicutes	Unlikely	+	+											+
Paenibacillus timonensis	Firmicutes	Rare	+	+	+		+	neg	neg	+		neg	neg	+	+
Paenibacillus tuaregi	Firmicutes	Rare	vr	+
Paenibacillus typhae	Firmicutes	Rare	+	+	+		neg	neg	neg	+		neg	+	+	+
Paenibacillus urinalis	Firmicutes	Rare	neg	+	+		w	neg	neg	w		neg	+	+	+
Paenibacillus xylanilyticus	Firmicutes	Rare	+	+										+
Paeniclostridium ghonii	Firmicutes	Rare	+
Paeniclostridium sordellii	Firmicutes	Minor	+	+											neg
Paenisporosarcina quisquiliarum	Firmicutes	Unlikely	+	+
Paludibacter jiangxiensis	Bacteroidetes	Rare	neg	+
Paludibacter propionicigenes	Bacteroidetes	Unlikely	neg
Paludibaculum fermentans	Acidobacteria	Unlikely	neg	+
Paludicola psychrotolerans	Firmicutes	Rare	+
Pannonibacter phragmitetus	Proteobacteria	Unlikely	neg	+
Pantoea agglomerans	Proteobacteria	Minor	neg	+					neg					+
Pantoea conspicua	Proteobacteria	Rare	neg	+										+
Pantoea eucalypti	Proteobacteria	Rare	neg											+
Pantoea rodasii	Proteobacteria	Unlikely	neg	+	+									+	+
Pantoea septica	Proteobacteria	Rare	neg											+
Pantoea vagans	Proteobacteria	Rare	neg											+
Papillibacter cinnamivorans	Firmicutes	Rare	+
Parabacteroides bouchesdurhonensis	Bacteroidetes	Minor	neg	+	+		+	neg	+	+		+	+	+	+
Parabacteroides chinchillae	Bacteroidetes	Minor	neg	+											neg
Parabacteroides distasonis	Bacteroidetes	Widespread	neg	+											+
Parabacteroides faecis	Bacteroidetes	Rare	neg	+											neg
Parabacteroides goldsteinii	Bacteroidetes	Moderate	neg	+
Parabacteroides gordonii	Bacteroidetes	Minor	neg	+											neg
Parabacteroides johnsonii	Bacteroidetes	Moderate	neg	+											neg
Parabacteroides massiliensis	Bacteroidetes	Rare	neg	+	neg		neg	neg	+	w		neg	+	+	+
Parabacteroides merdae	Bacteroidetes	Widespread	neg	+											d(+)
Parabacteroides pacaensis	Bacteroidetes	Rare	neg	neg	neg		neg	neg	neg	+		neg	neg	neg	neg
Parabacteroides pekinense	Bacteroidetes	Rare	neg	+											neg
Parabacteroides provencensis	Bacteroidetes	Rare	neg	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Parabacteroides timonensis	Bacteroidetes	Minor	neg
Paraburkholderia fungorum	Proteobacteria	Rare	neg
Paraburkholderia phytofirmans	Proteobacteria	Unlikely	neg	+
Paracholeplasma brassicae	Tenericutes	Unlikely	neg	+
Paraclostridium benzoelyticum	Firmicutes	Rare	+
Paraclostridium bifermentans	Firmicutes	Moderate	+
Paracoccus aminovorans	Proteobacteria	Rare	neg	+
Paracoccus carotinifaciens	Proteobacteria	Unlikely	neg	+
Paracoccus denitrificans	Proteobacteria	Rare	neg
Paracoccus haeundaensis	Proteobacteria	Unlikely	neg	neg
Paracoccus marcusii	Proteobacteria	Non	neg
Paracoccus marinus	Proteobacteria	Unlikely	neg	neg
Paracoccus sphaerophysae	Proteobacteria	Unlikely	neg	neg
Paracoccus yeei	Proteobacteria	Rare	neg	+
Paraeggerthella hongkongensis	Actinobacteria	Rare	+	neg
Parafannyhessea umbonata	Actinobacteria	Unlikely	+	+											neg
Paraliobacillus quinghaiensis	Firmicutes	Non	+	neg				+
Paramuribaculum intestinale	Bacteroidetes	Rare	neg
Paraprevotella clara	Bacteroidetes	Moderate	neg	+											neg
Paraprevotella xylaniphila	Bacteroidetes	Moderate	neg	+											neg
Pararheinheimera texasensis	Proteobacteria	Rare	neg
Parascardovia denticolens	Actinobacteria	Rare	+	+			neg								+
Parasphingorhabdus flavimaris	Proteobacteria	Unlikely	neg	neg
Parasporobacterium paucivorans	Firmicutes	Rare	neg
Parasutterella excrementihominis	Proteobacteria	Moderate	neg
Parasutterella secunda	Proteobacteria	Rare	neg
Paratractidigestivibacter faecalis	Actinobacteria	Rare	+	neg											neg
Paremcibacter congregatus	Proteobacteria	Unlikely	neg	+	neg		neg	w	neg	neg		neg	neg	+	neg
Parolsenella catena	Actinobacteria	Rare	+	+											neg
Parolsenella massiliensis	Actinobacteria	Rare	+	neg											neg
Parvibacter caecicola	Actinobacteria	Rare	+
Parvimonas micra	Firmicutes	Moderate	+	+							neg
Pasteurella aerogenes	Proteobacteria	Rare	neg	+										neg	neg	neg
Pasteurella dagmatis	Proteobacteria	Rare	neg	+
Pasteurella multocida	Proteobacteria	Rare	neg	+	neg										neg
Paucilactobacillus oligofermentans	Firmicutes	Non	+	w	neg		w	neg	neg	neg		neg	neg	w	neg
Paucilactobacillus suebicus	Firmicutes	Unlikely	+	+											neg
Paucilactobacillus vaccinostercus	Firmicutes	Unlikely	+	+	neg		+	neg		neg		neg		neg	neg
Paucisalibacillus globulus	Firmicutes	Unlikely	+	+	+		neg		+	neg		neg	neg	+	+
Pauljensenia bouchesdurhonensis	Actinobacteria	Minor	+
Pauljensenia cellulosilytica	Actinobacteria	Rare	+
Pauljensenia hongkongensis	Actinobacteria	Rare	+	neg
Pauljensenia keddieii	Actinobacteria	Minor	+
Pauljensenia odontolyticus	Actinobacteria	Rare	+
Pauljensenia turicensis	Actinobacteria	Rare	+
Pectobacterium wasabiae	Proteobacteria	Unlikely	neg	+					neg	neg			neg	+	+
Pediococcus acidilactici	Firmicutes	Rare	+	vr	+		neg	neg	neg	neg	neg	neg	neg		+
Pediococcus claussenii	Firmicutes	Rare
Pediococcus damnosus	Firmicutes	Unlikely	+	+	+		neg	neg	neg	neg		neg	neg	neg	+
Pediococcus pentosaceus	Firmicutes	Minor	+	+	+		neg	neg	neg	neg	neg	neg	neg	+	d(+)
Pedobacter cryoconitis	Proteobacteria	Non	neg
Pedobacter daejeonensis	Proteobacteria	Unlikely	neg	neg
Pedobacter panaciterrae	Bacteroidetes	Unlikely	neg	neg
Pedobacter terricola	Bacteroidetes	Non	neg
Pedomicrobium ferrugineum	Proteobacteria	Rare	neg
Pelistega indica	Proteobacteria	Rare	neg	neg
Pelobacter propionicus	Proteobacteria	Rare	neg
Pelomonas aquatica	Proteobacteria	Rare	neg
Pelomonas puraquae	Proteobacteria	Rare	neg
Pelomonas saccharophila	Proteobacteria	Rare	neg	+
Peptacetobacter hiranonis	Firmicutes	Minor	+	+											neg
Peptoclostridium acidaminophilum	Firmicutes	Unlikely	+
Peptococcus niger	Firmicutes	Rare	+
Peptoniphilus asaccharolyticus	Firmicutes	Minor	+	neg							neg
Peptoniphilus catoniae	Firmicutes	Rare	+
Peptoniphilus colimassiliensis	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	w	neg
Peptoniphilus duerdenii	Firmicutes	Rare	+
Peptoniphilus gorbachii	Firmicutes	Rare	+	neg
Peptoniphilus grossensis	Firmicutes	Rare	+
Peptoniphilus harei	Firmicutes	Minor	+	neg
Peptoniphilus indolicus	Firmicutes	Rare	+	neg
Peptoniphilus ivorii	Firmicutes	Rare	+	neg
Peptoniphilus koenoeneniae	Firmicutes	Rare	+	neg
Peptoniphilus lacrimalis	Firmicutes	Minor	+	neg							neg
Peptoniphilus obesi	Firmicutes	Rare	+
Peptoniphilus pacaensis	Firmicutes	Rare	+	neg			neg	neg	+						neg
Peptoniphilus phoceensis	Firmicutes	Rare	+	neg	neg		neg	+	neg	neg		neg	neg	neg	neg
Peptoniphilus senegalensis	Firmicutes	Rare	+
Peptoniphilus timonensis	Firmicutes	Rare	+
Peptostreptococcus anaerobius	Firmicutes	Moderate	+	w(+)							neg
Peptostreptococcus russellii	Firmicutes	Rare	+
Peptostreptococcus stomatis	Firmicutes	Minor	+	w(+)							neg				neg
Peribacillus psychrosaccharolyticus	Firmicutes	Unlikely	vr	+											d
Peribacillus simplex	Firmicutes	Rare	vr	w(+)	neg		neg	neg	neg	neg		neg	neg	w	neg
Petrimonas mucosa	Bacteroidetes	Unlikely	neg
Petrimonas sulfuriphila	Bacteroidetes	Rare	neg	+
Petrobacter succinatimandens	Proteobacteria	Rare	neg
Petrocella atlantisensis	Firmicutes	Unlikely	+
Phascolarctobacterium faecium	Firmicutes	Minor	neg	neg
Phascolarctobacterium succinatutens	Firmicutes	Moderate	neg	neg											neg
Phenylobacterium falsum	Proteobacteria	Unlikely	neg
Phenylobacterium haematophilum	Proteobacteria	Rare	neg
Phenylobacterium lituiforme	Proteobacteria	Unlikely	neg
Phocaeicola barnesiae	Bacteroidetes	Moderate	neg	+											+
Phocaeicola coprocola	Bacteroidetes	Widespread	neg	+											+
Phocaeicola coprophilus	Bacteroidetes	Widespread	neg	+											neg
Phocaeicola dorei	Bacteroidetes	Widespread	neg	+											neg
Phocaeicola massiliensis	Bacteroidetes	Minor	neg	+			neg			neg				+	neg
Phocaeicola paurosaccharolyticus	Bacteroidetes	Rare	neg
Phocaeicola plebeius	Bacteroidetes	Widespread	neg	+
Phocaeicola salanitronis	Bacteroidetes	Minor	neg	+											w
Phocaeicola sartorii	Bacteroidetes	Moderate	neg	+											neg
Phocaeicola vulgatus	Bacteroidetes	Widespread	neg	+							neg				neg
Phocea massiliensis	Firmicutes	Minor	neg
Phoenicibacter congonensis	Actinobacteria	Rare	+	+	+		+	+	+	+		+		+	+
Phyllobacterium myrsinacearum	Proteobacteria	Rare	neg	neg
Pigmentiphaga kullae	Proteobacteria	Rare	neg	neg						neg					neg
Planococcus massiliensis	Firmicutes	Unlikely	+	+
Planococcus rifietoensis	Firmicutes	Unlikely	+
Planomicrobium chinense	Firmicutes	Unlikely	+	+
Planomicrobium koreense	Firmicutes	Unlikely	+	w	neg		neg	neg	+	neg		neg	neg	neg	neg
Planomicrobium okeanokoites	Firmicutes	Unlikely	+	neg	neg		neg	neg	+	neg		neg	neg		neg
Plesiomonas shigelloides	Proteobacteria	Rare	neg	+					neg
Pluralibacter gergoviae	Proteobacteria	Rare	neg	+						neg					+
Pontibacillus litoralis	Firmicutes	Rare	+	+											neg
Porphyromonas asaccharolytica	Bacteroidetes	Minor	neg	neg											neg
Porphyromonas bennonis	Bacteroidetes	Rare	neg	+
Porphyromonas cangingivalis	Bacteroidetes	Unlikely	neg	neg											neg
Porphyromonas canoris	Bacteroidetes	Rare	neg	neg											neg
Porphyromonas crevioricanis	Bacteroidetes	Unlikely	neg	neg											neg
Porphyromonas endodontalis	Bacteroidetes	Minor	neg
Porphyromonas gingivalis	Bacteroidetes	Unlikely	neg	neg											neg
Porphyromonas levii	Bacteroidetes	Rare	neg	+											neg
Porphyromonas macacae	Bacteroidetes	Rare	neg	+											neg
Porphyromonas somerae	Bacteroidetes	Minor	neg	w											neg
Porphyromonas uenonis	Bacteroidetes	Minor	neg
Pragia fontium	Proteobacteria	Rare	neg	+											d
Prevotella albensis	Bacteroidetes	Rare	neg	+	+			neg	neg				neg	neg	+
Prevotella amnii	Bacteroidetes	Rare	neg	+											neg
Prevotella aurantiaca	Bacteroidetes	Rare	neg	+											neg
Prevotella baroniae	Bacteroidetes	Rare	neg	+											+
Prevotella bergensis	Bacteroidetes	Moderate	neg	+											+
Prevotella bivia	Bacteroidetes	Moderate	neg	+											neg
Prevotella brevis	Bacteroidetes	Minor	neg	+	neg			neg	neg				neg	w	neg
Prevotella bryantii	Bacteroidetes	Rare	neg	+				neg	neg					neg	+
Prevotella buccae	Bacteroidetes	Minor	neg	+											+
Prevotella buccalis	Bacteroidetes	Minor	neg	+											+
Prevotella conceptionensis	Bacteroidetes	Rare	neg	+
Prevotella copri	Bacteroidetes	Widespread	neg	+											+
Prevotella corporis	Bacteroidetes	Moderate	neg	+											neg
Prevotella dentalis	Bacteroidetes	Minor	neg	+											neg
Prevotella dentasini	Bacteroidetes	Rare	neg	+											neg
Prevotella denticola	Bacteroidetes	Minor	neg	+											neg
Prevotella disiens	Bacteroidetes	Minor	neg	+											neg
Prevotella enoeca	Bacteroidetes	Rare	neg	+											neg
Prevotella falsenii	Bacteroidetes	Rare
Prevotella fusca	Bacteroidetes	Unlikely	neg	+											w
Prevotella herbatica	Bacteroidetes	Unlikely	neg
Prevotella histicola	Bacteroidetes	Rare	neg	+											neg
Prevotella ihumii	Bacteroidetes	Rare	neg	neg	neg		neg	neg	+	neg		neg	neg	neg	neg
Prevotella intermedia	Bacteroidetes	Minor	neg	+											neg
Prevotella jejuni	Bacteroidetes	Rare	neg	+											neg
Prevotella lascolaii	Bacteroidetes	Minor	neg	neg					+			+
Prevotella loescheii	Bacteroidetes	Rare	neg	+											d(neg)
Prevotella maculosa	Bacteroidetes	Rare	neg	+											+
Prevotella marseillensis	Bacteroidetes	Rare	neg	+	+		+	neg	+	+		+	+	+	neg
Prevotella marshii	Bacteroidetes	Rare	neg	+											neg
Prevotella melaninogenica	Bacteroidetes	Moderate	neg	+											neg
Prevotella merdae	Bacteroidetes	Rare	neg
Prevotella micans	Bacteroidetes	Rare	neg	+											+
Prevotella multiformis	Bacteroidetes	Rare	neg	+											neg
Prevotella multisaccharivorax	Bacteroidetes	Minor	neg	+											d
Prevotella nanceiensis	Bacteroidetes	Rare	neg												neg
Prevotella nigrescens	Bacteroidetes	Minor	neg												neg
Prevotella oralis	Bacteroidetes	Minor	neg	+											d(+)
Prevotella oris	Bacteroidetes	Moderate	neg	+
Prevotella oryzae	Bacteroidetes	Unlikely	neg
Prevotella oulorum	Bacteroidetes	Rare	neg	+											neg
Prevotella pallens	Bacteroidetes	Rare	neg	+											neg
Prevotella paludivivens	Bacteroidetes	Rare	neg
Prevotella phocaeensis	Bacteroidetes	Rare	neg	neg	neg		neg	+	+	neg		neg	neg	neg	+
Prevotella pleuritidis	Bacteroidetes	Rare	neg	+											neg
Prevotella rara	Bacteroidetes	Rare	neg	+											neg
Prevotella rectalis	Bacteroidetes	Rare	neg	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Prevotella ruminicola	Bacteroidetes	Minor	neg	+	+										+
Prevotella saccharolytica	Bacteroidetes	Rare	neg	+											+
Prevotella salivae	Bacteroidetes	Rare	neg	+											+
Prevotella scopos	Bacteroidetes	Unlikely	neg	+											neg
Prevotella seregens	Bacteroidetes	Rare
Prevotella shahii	Bacteroidetes	Rare	neg	+											neg
Prevotella stercorea	Bacteroidetes	Moderate	neg	+											neg
Prevotella timonensis	Bacteroidetes	Minor	neg	+					w						neg
Prevotella veroralis	Bacteroidetes	Minor	neg	+											neg
Prevotellamassilia timonensis	Bacteroidetes	Minor	neg
Priestia flexa	Firmicutes	Rare	vr	+											d(+)
Priestia koreensis	Firmicutes	Unlikely	+	+
Priestia megaterium	Firmicutes	Rare	+	+	d		d(+)	neg	neg	neg		neg	neg	+	+
Prochlorococcus marinus	Cyanobacteria	Rare	neg
Prolixibacter bellariivorans	Bacteroidetes	Unlikely	neg	neg	+					+					+
Propionibacterium acidifaciens	Actinobacteria	Rare	+	+											neg
Propionibacterium freudenreichii	Actinobacteria	Rare	+	+							neg				neg
Propionimicrobium lymphophilum	Actinobacteria	Rare	neg	+											neg
Prosthecobacter fluviatilis	Verrucomicrobia	Rare	neg
Proteiniphilum saccharofermentans	Bacteroidetes	Unlikely	neg
Proteus mirabilis	Proteobacteria	Moderate	neg	+					neg						neg	neg
Proteus penneri	Proteobacteria	Rare	neg	+					neg	+					neg	neg
Proteus vulgaris	Proteobacteria	Rare	neg	+					neg						d(+)	neg
Provencibacterium massiliense	Firmicutes	Moderate	neg
Providencia alcalifaciens	Proteobacteria	Minor	neg	+					neg	neg					neg	neg
Providencia heimbachae	Proteobacteria	Rare	neg	+						neg					neg	neg
Providencia rettgeri	Proteobacteria	Minor	neg	+					neg	neg					d	neg
Providencia rustigianii	Proteobacteria	Rare	neg	+					neg	neg					neg	neg
Providencia stuartii	Proteobacteria	Rare	neg	+					neg	neg					neg	neg
Pseudarthrobacter oxydans	Actinobacteria	Rare	+
Pseudarthrobacter polychromogenes	Actinobacteria	Unlikely	vr
Pseudescherichia vulneris	Proteobacteria	Rare	neg	+						d(neg)					d(neg)
Pseudobutyrivibrio ruminis	Firmicutes	Rare	neg	+
Pseudobutyrivibrio xylanivorans	Firmicutes	Unlikely	neg
Pseudochrobactrum asaccharolyticum	Proteobacteria	Rare	neg
Pseudochrobactrum saccharolyticum	Proteobacteria	Rare	neg
Pseudocitrobacter anthropi	Proteobacteria	Rare	neg	+											+
Pseudocitrobacter faecalis	Proteobacteria	Rare	neg	+											+
Pseudoclavibacter alba	Actinobacteria	Rare	+	neg
Pseudoclavibacter helvolus	Actinobacteria	Unlikely	+
Pseudoclavibacter sp. Timone	Actinobacteria	Rare	+
Pseudoclostridium thermosuccinogenes	Firmicutes	Unlikely	neg
Pseudodesulfovibrio aespoeensis	Proteobacteria	Unlikely	neg														+
Pseudodesulfovibrio indicus	Proteobacteria	Unlikely	neg
Pseudoflavonifractor capillosus	Firmicutes	Moderate	neg	w											neg
Pseudoglutamicibacter albus	Actinobacteria	Rare	+
Pseudoglutamicibacter cumminsii	Actinobacteria	Unlikely	+	d
Pseudomonas aeruginosa	Proteobacteria	Rare	neg	+					neg
Pseudomonas alcaligenes	Proteobacteria	Non	neg
Pseudomonas alcaliphila	Proteobacteria	Rare	neg	+
Pseudomonas asiatica	Proteobacteria	Rare	neg
Pseudomonas asplenii	Proteobacteria	Unlikely	neg	+	neg		+	neg	neg	neg		neg	neg	neg	neg
Pseudomonas boreopolis	Proteobacteria	Non	neg	w			neg							+
Pseudomonas caricapapayae	Proteobacteria	Non	neg
Pseudomonas chlororaphis	Proteobacteria	Non	neg
Pseudomonas citronellolis	Proteobacteria	Rare	neg	neg
Pseudomonas fluorescens	Proteobacteria	Unlikely	neg	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Pseudomonas fragi	Proteobacteria	Rare	neg
Pseudomonas fulva	Proteobacteria	Rare	neg
Pseudomonas gessardii	Proteobacteria	Non	neg	+
Pseudomonas japonica	Proteobacteria	Non	neg
Pseudomonas libanensis	Proteobacteria	Non	neg
Pseudomonas lundensis	Proteobacteria	Non	neg	+											neg
Pseudomonas luteola	Proteobacteria	Unlikely	neg	+		+	neg								d(+)
Pseudomonas massiliensis	Proteobacteria	Non	neg	+
Pseudomonas mendocina	Proteobacteria	Rare	neg
Pseudomonas migulae	Proteobacteria	Non	neg
Pseudomonas monteilii	Proteobacteria	Unlikely	neg	neg
Pseudomonas mosselii	Proteobacteria	Non	neg
Pseudomonas nitroreducens	Proteobacteria	Unlikely	neg	+
Pseudomonas oleovorans	Proteobacteria	Unlikely	neg	neg					neg						neg
Pseudomonas oryzihabitans	Proteobacteria	Unlikely	neg	+											neg
Pseudomonas parafulva	Proteobacteria	Unlikely	neg
Pseudomonas protegens	Proteobacteria	Unlikely	neg
Pseudomonas putida Biovar A	Proteobacteria	Rare	neg	neg					neg
Pseudomonas putida Biovar B	Proteobacteria	Rare	neg	neg					neg
Pseudomonas rhodesiae	Proteobacteria	Non	neg
Pseudomonas saudiphocaensis	Proteobacteria	Rare	neg
Pseudomonas straminea	Proteobacteria	Unlikely	neg	neg
Pseudomonas stutzeri	Proteobacteria	Unlikely	neg	neg					neg
Pseudomonas taetrolens	Proteobacteria	Non	neg
Pseudomonas tolaasii	Proteobacteria	Unlikely	neg
Pseudomonas veronii	Proteobacteria	Rare	neg
Pseudomonas weihenstephanensis	Proteobacteria	Unlikely	neg
Pseudomonas xanthomarina	Proteobacteria	Non	neg	d
Pseudomonas yamanorum	Proteobacteria	Unlikely	neg	+	neg		+	+	neg	neg		neg	neg	+	neg
Pseudomonas zhaodongensis	Proteobacteria	Unlikely	neg	+
Pseudonocardia dioxanivorans	Actinobacteria	Unlikely	+	+											+
Pseudoprevotella muciniphila	Bacteroidetes	Rare	neg
Pseudopropionibacterium massiliense	Actinobacteria	Rare	+	+	neg		neg	neg	+	neg		neg	neg	+	neg
Pseudoramibacter alactolyticus	Firmicutes	Rare	+	+											neg
Pseudoruegeria marinistellae	Proteobacteria	Rare	neg
Pseudoruminococcus massiliensis	Firmicutes	Rare	neg	neg
Pseudoxanthomonas broegbernensis	Proteobacteria	Unlikely	neg
Pseudoxanthomonas japonensis	Proteobacteria	Unlikely	neg
Pseudoxanthomonas mexicana	Proteobacteria	Rare	neg	neg
Pseudoxanthomonas spadix	Proteobacteria	Rare	neg	neg
Pseudoxanthomonas suwonensis	Proteobacteria	Rare	neg
Pseudoxanthomonas taiwanensis	Proteobacteria	Rare	neg
Psychrobacter alimentarius	Proteobacteria	Unlikely	+	+
Psychrobacter arenosus	Proteobacteria	Unlikely	neg	+
Psychrobacter cibarius	Proteobacteria	Unlikely	neg	neg
Psychrobacter faecalis	Proteobacteria	Unlikely	neg	+						neg					neg
Psychrobacter fulvigenes	Proteobacteria	Rare	neg	neg
Psychrobacter maritimus	Proteobacteria	Unlikely	neg
Psychrobacter namhaensis	Proteobacteria	Unlikely	neg	+
Psychrobacter phenylpyruvicus	Proteobacteria	Rare	neg	neg						neg				neg
Psychrobacter pulmonis	Proteobacteria	Unlikely	neg	neg
Pusillimonas faecalis	Firmicutes	Rare	neg
Pygmaiobacter massiliensis	Firmicutes	Minor	+
Pyramidobacter piscolens	Synergistetes	Minor	neg
Rahnella aquatilis	Proteobacteria	Unlikely	neg	+						neg					+
Ralstonia mannitolilytica	Proteobacteria	Rare	neg	+		neg									neg
Ralstonia pickettii Biovar Va-1&2	Proteobacteria	Rare	neg	+		neg									neg	+
Raoultella ornithinolytica	Proteobacteria	Minor	neg	+	+		+	+	+	+					+
Raoultella planticola	Proteobacteria	Rare	neg	+	+				+	+		neg		+	+
Raoultella terrigena	Proteobacteria	Rare	neg	+					+	+					+
Raoultibacter massiliensis	Actinobacteria	Rare	+	+	+		+	neg	+	neg		neg	neg	+	+
Raoultibacter timonensis	Actinobacteria	Rare	+	+	+		+	neg		neg		neg	neg	+	+
Rheinheimera perlucida	Proteobacteria	Unlikely	neg	neg	neg		neg	neg	neg	neg		neg	neg	+	neg
Rhizobium metallidurans	Proteobacteria	Unlikely	neg
Rhizorhabdus wittichii	Proteobacteria	Unlikely	neg	+		neg									+
Rhodanobacter ginsenosidimutans	Proteobacteria	Unlikely	neg	neg
Rhodococcus erythropolis	Actinobacteria	Rare	+	neg							neg			neg
Rhodococcus hoagii	Actinobacteria	Rare	+
Rhodococcus jostii	Actinobacteria	Non	+	+
Rhodococcus opacus	Actinobacteria	Unlikely	+	+
Rhodococcus qingshengii	Actinobacteria	Unlikely	+
Rhodococcus rhodochrous	Actinobacteria	Rare	+	neg
Rhodoplanes serenus	Proteobacteria	Unlikely	neg
Rhodothermus marinus	Bacteroidetes	Non	neg
Riemerella columbina	Bacteroidetes	Rare	neg	+
Rikenella microfusus	Bacteroidetes	Rare	neg	+						neg		neg			neg
Risungbinella massiliensis	Firmicutes	Rare	+	neg	neg								neg	neg	neg
Robertmurraya andreesenii	Firmicutes	Unlikely	+
Robertmurraya kyonggiensis	Firmicutes	Rare	+	+	+		+	neg	neg	w		neg	neg	w	+
Robertmurraya massiliosenegalensis	Firmicutes	Rare	+	+										+
Robinsoniella peoriensis	Firmicutes	Rare	+	+
Romboutsia hominis	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Romboutsia ilealis	Firmicutes	Rare	vr	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Romboutsia lituseburensis	Firmicutes	Minor	+	+			neg
Romboutsia maritimum	Firmicutes	Rare	+
Romboutsia timonensis	Firmicutes	Moderate	+	+
Romboutsia weinsteinii	Firmicutes	Rare	+
Roseburia faecis	Firmicutes	Widespread	vr
Roseburia hominis	Firmicutes	Widespread	vr
Roseburia intestinalis	Firmicutes	Widespread	vr	+
Roseburia inulinivorans	Firmicutes	Widespread	vr
Roseobacter denitrificans	Proteobacteria	Non	neg
Roseomonas gilardii	Proteobacteria	Rare	neg	neg					neg
Roseomonas mucosa	Proteobacteria	Rare	neg	neg
Rossellomorea aquimaris	Firmicutes	Unlikely	vr	+	neg		neg	neg	+	neg		neg	neg	neg	neg
Rossellomorea marisflavi	Firmicutes	Rare	vr	+	+		neg	neg	neg	neg		+	neg	neg	+
Rossellomorea vietnamensis	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	+	neg
Rothia aeria	Actinobacteria	Minor	+	+							neg
Rothia dentocariosa	Actinobacteria	Minor	+	+						+	vr			neg
Rothia halotolerans	Actinobacteria	Unlikely	+	w	+		w	neg	neg	neg		neg	neg	+	+
Rothia koreensis	Actinobacteria	Rare	+
Rothia kristinae	Actinobacteria	Rare	+	+
Rothia mucilaginosa	Actinobacteria	Moderate	+	+						+	vr			neg	+
Rothia terrae	Actinobacteria	Rare	+	+											neg
Rubeoparvulum massiliense	Firmicutes	Rare	neg	neg	neg		neg	neg	+	neg		neg	neg	+	+
Rubinisphaera brasiliensis	Planctomycetes	Non	neg
Rubneribacter badeniensis	Actinobacteria	Minor	+	neg											neg
Rubrobacter xylanophilus	Actinobacteria	Non	+
Rudanella lutea	Bacteroidetes	Unlikely	neg	neg
Ruminiclostridium cellobioparum	Firmicutes	Rare	vr
Ruminiclostridium cellulolyticum	Firmicutes	Unlikely	+	+											neg
Ruminiclostridium herbifermentans	Firmicutes	Unlikely	vr
Ruminiclostridium josui	Firmicutes	Rare	+												neg
Ruminococcus albus	Firmicutes	Moderate	+	d											neg
Ruminococcus bicirculans	Firmicutes	Moderate	+
Ruminococcus bovis	Firmicutes	Unlikely	+	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Ruminococcus bromii	Firmicutes	Widespread	+	w											neg
Ruminococcus callidus	Firmicutes	Widespread	+	+											vr
Ruminococcus champanellensis	Firmicutes	Moderate	+
Ruminococcus flavefaciens	Firmicutes	Moderate	+	d(neg)											neg
Ruminococcus gauvreauii	Firmicutes	Minor	+	+											neg
Ruminococcus gnavus	Firmicutes	Widespread	+	+							neg
Ruminococcus lactaris	Firmicutes	Widespread	+	+											neg
Ruminococcus phoceensis	Firmicutes	Rare	+
Ruminococcus torques	Firmicutes	Widespread	+	vr											vr
Rummeliibacillus pycnus	Firmicutes	Unlikely	+	+
Rummeliibacillus stabekisii	Firmicutes	Rare	+	neg
Rummeliibacillus suwonensis	Firmicutes	Rare	+	neg
Ruoffia tabacinasalis	Firmicutes	Rare	+
Ruthenibacterium lactatiformans	Firmicutes	Moderate	neg	w											+
Saccharibacillus brassicae	Firmicutes	Unlikely	+
Saccharofermentans acetigenes	Firmicutes	Non	+	+											neg
Salimicrobium jeotgali	Firmicutes	Non	+	+
Salinicoccus halodurans	Firmicutes	Unlikely	+	+	neg		neg	neg	+	neg		neg	neg	+	neg
Salinisphaera halophila	Proteobacteria	Non	neg	neg	neg		neg	neg	+	neg		neg	neg	neg	neg
Salinivibrio costicola	Proteobacteria	Rare	neg	+										+			+
Salmonella bongori	Proteobacteria	Rare	neg	+
Salmonella enterica	Proteobacteria	Unlikely	neg	+					+
Salmonella enterica subsp. arizonae	Proteobacteria	Non	neg	+				neg		neg					neg
Salmonella enterica subsp. enterica serovar Choleraesuis	Proteobacteria	Unlikely	neg	+				neg		neg					neg
Salmonella enterica subsp. enterica serovar Enteritidis	Proteobacteria	Rare	neg	+				neg		neg					neg
Salmonella enterica subsp. enterica serovar Paratyphi A	Proteobacteria	Rare	neg	+				neg		neg					neg
Salmonella enterica subsp. enterica serovar Typhi	Proteobacteria	Rare	neg	+				neg		neg					neg
Salmonella enterica subsp. enterica serovar Typhimurium	Proteobacteria	Rare	neg	+				neg		neg					neg
Sanguibacter massiliensis	Actinobacteria	Rare	+
Sarcina maxima	Firmicutes	Rare	+	+
Sarcina ventriculi	Firmicutes	Minor	+	+
Scardovia inopinata	Actinobacteria	Rare	+	+	+		neg	neg	neg	neg		neg	neg	neg	+
Scardovia wiggsiae	Actinobacteria	Minor	+	+											d
Schaalia cardiffensis	Actinobacteria	Rare	+	+						neg					neg
Schaalia hyovaginalis	Actinobacteria	Rare	+	+			+			neg			d	+	+
Schaalia meyeri	Actinobacteria	Rare	+	+											neg
Schaalia odontolytica	Actinobacteria	Moderate	+	d											neg
Schaalia radingae	Actinobacteria	Rare	+	+											vr
Schaalia turicensis	Actinobacteria	Rare	+	+											d
Schleiferilactobacillus harbinensis	Firmicutes	Unlikely	+	+	+		+	w	w	+		neg	d		+
Schleiferilactobacillus perolens	Firmicutes	Unlikely	+	+	+		+	d	d	+		d	neg	+	d
Schleiferilactobacillus shenzhenensis	Firmicutes	Unlikely
Schlesneria paludicola	Planctomycetes	Unlikely	neg
Schnuerera ultunensis	Firmicutes	Unlikely	+
Sebaldella termitidis	Fusobacteria	Unlikely	neg	+
Sediminibacillus massiliensis	Firmicutes	Rare	+
Sediminispirochaeta smaragdinae	Spirochaetes	Unlikely	neg
Selenomonas artemidis	Firmicutes	Rare	neg	+											neg
Selenomonas bovis	Firmicutes	Rare	neg
Selenomonas flueggei	Firmicutes	Rare	neg	+											neg
Selenomonas infelix	Firmicutes	Rare	neg	+											neg
Selenomonas noxia	Firmicutes	Rare	neg	d											neg
Selenomonas ruminantium	Firmicutes	Minor	neg	+											neg
Selenomonas sputigena	Firmicutes	Rare	neg	+											neg
Selenomonas timonae	Firmicutes	Unlikely	neg
Sellimonas intestinalis	Firmicutes	Minor	+	+
Senegalia massiliensis	Firmicutes	Rare	+	+	+		+			+		neg	neg	+	+
Senegalimassilia anaerobia	Actinobacteria	Minor	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Senegalimassilia faecalis	Actinobacteria	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Serratia ficaria	Proteobacteria	Rare	neg	+	+		neg	neg	+	+		neg	neg	+	+	neg
Serratia fonticola	Proteobacteria	Rare	neg	+					neg	+					+	+
Serratia liquefaciens	Proteobacteria	Rare	neg	w					+	neg					+
Serratia marcescens	Proteobacteria	Minor	neg	+	+		+	vr	+	neg		neg	neg	+	+
Serratia odorifera	Proteobacteria	Rare	neg	+						neg					+
Serratia quinivorans	Proteobacteria	Rare	neg	+											neg
Serratia ureilytica	Proteobacteria	Rare	neg	+
Sharpea azabuensis	Firmicutes	Rare	+	+											d
Shewanella algae	Proteobacteria	Unlikely	neg	d(w)										neg
Shewanella carassii	Proteobacteria	Rare	neg	neg
Shewanella decolorationis	Proteobacteria	Rare	neg	+
Shewanella xiamenensis	Proteobacteria	Rare	neg	+
Shigella boydii	Proteobacteria	Rare	neg	+											neg
Shigella dysenteriae	Proteobacteria	Unlikely	neg	+						neg					neg
Shigella flexneri	Proteobacteria	Minor	neg	+					neg	neg					neg
Shigella sonnei	Proteobacteria	Minor	neg	+					vr	neg					neg
Shuttleworthia satelles	Firmicutes	Rare	+	+											+
Silanimonas lenta	Proteobacteria	Non	neg	+
Skermanella aerolata	Proteobacteria	Unlikely	neg	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Slackia equolifaciens	Actinobacteria	Rare	+	neg											neg
Slackia exigua	Actinobacteria	Rare	+	neg							neg
Slackia faecicanis	Actinobacteria	Rare	+	neg
Slackia heliotrinireducens	Actinobacteria	Rare	+
Slackia isoflavoniconvertens	Actinobacteria	Rare	+
Slackia piriformis	Actinobacteria	Minor	+
Sneathia sanguinegens	Fusobacteria	Rare	neg	+						neg					+
Sneathia vaginalis	Fusobacteria	Rare	neg	+
Sodaliphilus pleomorphus	Bacteroidetes	Rare	neg
Soleaferrea massiliensis	Firmicutes	Rare	+
Solibacillus silvestris	Firmicutes	Unlikely	+
Solibaculum mannosilyticum	Firmicutes	Rare	vr	w											neg
Solobacterium moorei	Firmicutes	Minor	+	+							neg				neg
Sorangium cellulosum	Proteobacteria	Rare	neg
Sphaerotilus natans	Proteobacteria	Unlikely	neg
Sphingobacterium alimentarium	Bacteroidetes	Unlikely	neg	+
Sphingobacterium faecium	Bacteroidetes	Rare	neg	+	+		neg	neg	neg	+		+	neg	+	+
Sphingobacterium mizutaii	Bacteroidetes	Unlikely	neg	+		neg									+
Sphingobacterium multivorum	Bacteroidetes	Rare	neg	+					neg						+
Sphingobacterium nematocida	Bacteroidetes	Unlikely	neg	+	+		neg	neg	neg	neg		neg	neg	neg	+
Sphingobacterium siyangense	Bacteroidetes	Rare	neg	neg
Sphingobacterium spiritivorum	Bacteroidetes	Rare	neg	+	+	+			neg	+		+		d	+
Sphingobacterium thalpophilum	Bacteroidetes	Unlikely	neg	+		neg	neg								+
Sphingobium xenophagum	Proteobacteria	Unlikely	neg	neg						neg					neg
Sphingomonas adhaesiva	Proteobacteria	Unlikely	neg	neg						neg					neg
Sphingomonas aerolata	Proteobacteria	Non	neg
Sphingomonas aestuarii	Proteobacteria	Unlikely	neg	neg
Sphingomonas azotifigens	Proteobacteria	Rare	neg	+		neg
Sphingomonas bisphenolicum	Proteobacteria	Unlikely	neg	+
Sphingomonas echinoides	Proteobacteria	Unlikely	neg	neg						neg					neg
Sphingomonas glacialis	Proteobacteria	Unlikely	neg	neg
Sphingomonas hankookensis	Proteobacteria	Rare	neg
Sphingomonas koreensis	Proteobacteria	Unlikely	neg	neg						neg					neg
Sphingomonas melonis	Proteobacteria	Rare	neg	+		neg									neg
Sphingomonas panni	Proteobacteria	Rare	neg	neg						neg					neg
Sphingomonas paucimobilis	Proteobacteria	Rare	neg	vr					neg						+
Sphingomonas pseudosanguinis	Proteobacteria	Rare	neg	neg
Sphingomonas sinipercae	Proteobacteria	Unlikely	neg	neg	neg				+						neg
Sphingomonas yabuuchiae	Proteobacteria	Rare	neg	neg
Sphingopyxis bauzanensis	Proteobacteria	Unlikely	neg	neg
Spiribacter roseus	Proteobacteria	Non	neg
Spirochaeta coccoides	Spirochaetes	Rare	neg
Spirochaeta thermophila	Spirochaetes	Non	neg
Spirosoma linguale	Bacteroidetes	Unlikely	neg	+						+
Sporobacter termitidis	Firmicutes	Rare	+
Sporolactobacillus laevolacticus	Firmicutes	Unlikely	+	+						neg
Sporolactobacillus nakayamae subsp. racemicus	Firmicutes	Rare	+	+						d					d
Sporomusa termitida	Firmicutes	Unlikely	neg
Sporosarcina aquimarina	Firmicutes	Non	+	neg	neg		neg	neg	+	neg		neg	neg	+	neg
Sporosarcina koreensis	Firmicutes	Unlikely	+	neg
Sporosarcina luteola	Firmicutes	Rare	vr	+	neg		neg	neg	neg	+		neg	neg	neg	neg
Sporosarcina siberiensis	Firmicutes	Unlikely	+	+	neg		neg	+	+	neg		neg	neg	+	+
Stackebrandtia nassauensis	Actinobacteria	Unlikely	+	+						+			neg		+
Staphylococcus arlettae	Firmicutes	Rare	+	vr						+				neg
Staphylococcus aureus subsp. aureus	Firmicutes	Minor	+	+						+	vr
Staphylococcus auricularis	Firmicutes	Rare	+	+										vr	neg
Staphylococcus capitis subsp. capitis	Firmicutes	Rare	+	vr						+	neg			neg
Staphylococcus caprae	Firmicutes	Rare	+	vr						neg				neg	neg
Staphylococcus carnosus	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg		neg	neg	w	neg
Staphylococcus cohnii subsp. cohnii	Firmicutes	Rare	+	neg						vr	neg			neg
Staphylococcus condimenti	Firmicutes	Rare	+	+										+
Staphylococcus devriesei	Firmicutes	Rare	+	+											neg
Staphylococcus epidermidis	Firmicutes	Widespread	+	+						vr	neg			d	neg
Staphylococcus equorum subsp. equorum	Firmicutes	Rare	+	vr						+				neg
Staphylococcus gallinarum	Firmicutes	Rare	+		+										+
Staphylococcus haemolyticus	Firmicutes	Minor	+	vr						+					neg
Staphylococcus hominis subsp. hominis	Firmicutes	Minor	+	vr						+				neg
Staphylococcus hyicus	Firmicutes	Rare	+	+											neg
Staphylococcus intermedius	Firmicutes	Rare	+	vr						+				+	neg
Staphylococcus kloosii	Firmicutes	Rare	+	vr						neg				neg
Staphylococcus lugdunensis	Firmicutes	Rare	+	vr						+	neg
Staphylococcus nepalensis	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Staphylococcus pasteuri	Firmicutes	Minor	+	+										neg
Staphylococcus petrasii	Firmicutes	Rare	+	+	neg		neg	neg	w	neg		neg	neg	neg	neg
Staphylococcus pettenkoferi	Firmicutes	Rare	+	d						vr				neg
Staphylococcus pseudintermedius	Firmicutes	Rare	+	+	neg		neg	neg	neg	neg			neg	+	neg
Staphylococcus saccharolyticus	Firmicutes	Rare	+	+						neg	neg			neg	neg
Staphylococcus saprophyticus subsp. saprophyticus	Firmicutes	Rare	+	vr						+				neg
Staphylococcus schleiferi subsp. schleiferi	Firmicutes	Rare	+	vr						neg				d
Staphylococcus simiae	Firmicutes	Rare	+	+						neg				+
Staphylococcus simulans	Firmicutes	Rare	+	vr						+					neg
Staphylococcus succinus subsp. succinus	Firmicutes	Unlikely	+
Staphylococcus warneri	Firmicutes	Minor	+	vr						+				neg	neg
Staphylococcus xylosus	Firmicutes	Rare	+	vr						+					d(+)
Starkeya novella	Proteobacteria	Unlikely	neg
Stenotrophomonas acidaminiphila	Proteobacteria	Unlikely	neg
Stenotrophomonas bentonitica	Proteobacteria	Unlikely	neg	+						neg					neg
Stenotrophomonas maltophilia	Proteobacteria	Minor	neg	d					neg
Stenotrophomonas rhizophila	Proteobacteria	Rare	neg	neg
Stomatobaculum longum	Firmicutes	Minor	vr	+											neg
Streptobacillus hongkongensis	Fusobacteria	Rare	neg
Streptobacillus moniliformis	Fusobacteria	Unlikely	neg	+
Streptococcus acidominimus	Firmicutes	Unlikely	+	+			neg	neg	neg	neg		neg	neg
Streptococcus agalactiae	Firmicutes	Minor	+	+	neg		neg	neg	neg	+	neg	neg	d	+	vr
Streptococcus alactolyticus	Firmicutes	Rare	+	+	d(neg)		neg	neg	neg	d(+)	d(neg)	neg	neg	+	d(+)
Streptococcus anginosus	Firmicutes	Widespread	+	+	+		neg	neg	neg	+	+	neg	neg	+	+
Streptococcus anginosus subsp. whileyi	Firmicutes	Rare	+	+	+					+				d	d
Streptococcus australis	Firmicutes	Minor	+	+	neg		neg	neg	neg	neg	neg	neg	neg	+	+
Streptococcus caballi	Firmicutes	Rare	+
Streptococcus canis	Firmicutes	Unlikely	+	+			neg	neg	d(neg)	d		neg	neg	+	+
Streptococcus castoreus	Firmicutes	Rare	+	+
Streptococcus constellatus subsp. constellatus	Firmicutes	Minor	+	+	d(neg)									+	w(+)
Streptococcus cristatus	Firmicutes	Minor	+	+	vr						neg			+	neg
Streptococcus danieliae	Firmicutes	Rare	+	+
Streptococcus didelphis	Firmicutes	Rare	+	+											neg
Streptococcus downei	Firmicutes	Rare	+	+											+
Streptococcus dysgalactiae	Firmicutes	Rare	+	+							neg				vr
Streptococcus dysgalactiae subsp. equisimilis	Firmicutes	Unlikely	+	+
Streptococcus equi subsp. equi	Firmicutes	Rare	+	+							+				+
Streptococcus equinus	Firmicutes	Moderate	+	+	+		neg	neg	neg	d(+)	+	neg	neg	+	+
Streptococcus ferus	Firmicutes	Rare	+	+	d		neg	neg	neg	neg		neg		+	+
Streptococcus gallolyticus subsp. gallolyticus	Firmicutes	Minor	+	+	+		neg	neg	neg	+	+	neg	neg	+	+
Streptococcus gordonii	Firmicutes	Minor	+	+	+		neg	neg	neg	d(+)	vr	neg	neg	+	+
Streptococcus gwangjuense	Firmicutes	Unlikely	+	+
Streptococcus henryi	Firmicutes	Rare	+
Streptococcus hyovaginalis	Firmicutes	Rare	+	+			neg	neg	neg	neg		neg	neg	+	+
Streptococcus ilei	Firmicutes	Unlikely	+	+	neg		neg	neg	+	+		neg	neg	d	+
Streptococcus infantarius	Firmicutes	Minor	+	+	neg		neg	neg	neg	d(+)	neg	neg	neg	+	+
Streptococcus infantarius subsp. infantarius	Firmicutes	Minor	+	+						d(neg)
Streptococcus infantis	Firmicutes	Minor	+	+	neg					neg	neg
Streptococcus intermedius	Firmicutes	Moderate	+	+	+					d(+)				+	d(+)
Streptococcus koreensis	Firmicutes	Unlikely	+	+
Streptococcus lactarius	Firmicutes	Rare	+
Streptococcus lutetiensis	Firmicutes	Minor	+	+	+		neg	neg	neg	+	vr	neg	neg	+	+
Streptococcus macedonicus	Firmicutes	Rare	+	+	d(neg)		neg	neg	neg	neg		neg	neg	+	d(neg)
Streptococcus merionis	Firmicutes	Rare	+	+
Streptococcus mitis	Firmicutes	Moderate	+	+	neg		neg	neg	neg	neg	neg	neg	neg	+	d(neg)
Streptococcus mutans	Firmicutes	Moderate	+	+	+		neg	neg	neg	neg	vr	neg	neg	+	+
Streptococcus oralis	Firmicutes	Minor	+	+	neg		neg	neg	neg	neg	neg	neg	neg	+	neg
Streptococcus oralis subsp. tigurinus	Firmicutes	Rare	+	+
Streptococcus orisratti	Firmicutes	Rare	+	+	+										+
Streptococcus ovis	Firmicutes	Rare	+	+
Streptococcus pantholopis	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	+
Streptococcus parasanguinis	Firmicutes	Widespread	+	+	d(+)		neg	neg	neg	d(+)	neg	neg	neg	+	d(+)
Streptococcus parasuis	Firmicutes	Rare	+	+
Streptococcus parauberis	Firmicutes	Rare	+	+	+		neg	neg	neg	neg	+	neg	neg	+	+
Streptococcus pasteurianus	Firmicutes	Minor	+	+						+				+
Streptococcus periodonticum	Firmicutes	Unlikely	+	+
Streptococcus peroris	Firmicutes	Rare	+	+	neg					neg	neg
Streptococcus pluranimalium	Firmicutes	Unlikely	+	+	d		neg	neg	neg	neg		neg	neg	d(+)
Streptococcus plurextorum	Firmicutes	Rare	+	+	neg			neg	w			neg		neg	w
Streptococcus pneumoniae	Firmicutes	Minor	+	+	neg					d(+)	vr			d(+)	d(+)
Streptococcus porci	Firmicutes	Rare	+	+	+			neg	neg	neg		neg	+	+	+
Streptococcus pseudopneumoniae	Firmicutes	Minor	+	+							neg
Streptococcus pseudoporcinus	Firmicutes	Rare	+	+											+
Streptococcus pyogenes	Firmicutes	Minor	+	+	neg		neg	neg	neg	+	vr	neg	neg	+	vr
Streptococcus rubneri	Firmicutes	Rare	+	+	neg			neg	neg	neg		neg	neg	+	+
Streptococcus salivarius	Firmicutes	Widespread	+	+	+		neg	neg	neg	d(+)	vr	neg	neg	+	+
Streptococcus sanguinis	Firmicutes	Moderate	+	+	d		neg	neg	neg	d(+)	vr	neg	neg	+	+
Streptococcus sinensis	Firmicutes	Rare	+	+											+
Streptococcus sobrinus	Firmicutes	Minor	+	+	neg		neg			neg		neg	neg	neg	neg
Streptococcus suis	Firmicutes	Rare	+	+	neg		neg	neg	neg	d(+)	vr	neg	neg	+	+
Streptococcus thermophilus	Firmicutes	Widespread	+	+	d(+)		neg			neg		neg	neg	neg	neg
Streptococcus thoraltensis	Firmicutes	Rare	+	+	+		neg	neg	neg	d(+)	+	neg	neg	+	+
Streptococcus timonensis	Firmicutes	Minor	+	+	neg		neg	neg	neg	neg		neg	neg	neg	neg
Streptococcus uberis	Firmicutes	Rare	+	+	+		neg	neg	neg	d(+)	+	neg	neg	+	+
Streptococcus vestibularis	Firmicutes	Moderate	+	+	vr		neg	neg	neg	d(+)	vr	neg	neg	vr	+
Streptococcus viridans	Firmicutes	Rare	+	+
Streptomyces albus	Actinobacteria	Unlikely	+	w
Streptomyces flavogriseus	Actinobacteria	Unlikely	+
Streptomyces hygroscopicus	Actinobacteria	Unlikely	+
Streptomyces koyangensis	Actinobacteria	Rare	+
Streptomyces lividans	Actinobacteria	Unlikely	+
Streptomyces massiliensis	Actinobacteria	Unlikely	+
Streptomyces misionensis	Actinobacteria	Rare	+
Streptomyces specialis	Actinobacteria	Unlikely	+
Streptomyces thermoviolaceus	Actinobacteria	Rare	+	neg
Streptomyces thermovulgaris	Actinobacteria	Unlikely	+
Streptomyces violaceusniger	Actinobacteria	Unlikely	+
Streptosporangium roseum	Actinobacteria	Unlikely	+
Subdoligranulum formicile	Firmicutes	Rare	neg
Subdoligranulum variabile	Firmicutes	Moderate	neg
Succinatimonas hippei	Proteobacteria	Minor	neg	+											neg
Succinivibrio dextrinosolvens	Proteobacteria	Rare	neg	+											neg
Sulfurospirillum deleyianum	Proteobacteria	Rare	neg	neg
Sutcliffiella cohnii	Firmicutes	Unlikely	+	neg									neg		neg
Sutterella faecalis	Proteobacteria	Rare	neg	neg											neg
Sutterella massiliensis	Proteobacteria	Rare	neg
Sutterella megalosphaeroides	Proteobacteria	Rare	neg	neg
Sutterella parvirubra	Proteobacteria	Minor	neg
Sutterella seckii	Proteobacteria	Rare	neg
Sutterella stercoricanis	Proteobacteria	Rare	neg	neg
Sutterella timonensis	Proteobacteria	Rare	neg
Sutterella wadsworthensis	Proteobacteria	Widespread	neg	neg							neg				neg
Symbiobacterium thermophilum	Firmicutes	Unlikely	neg
Symbiobacterium toebii	Firmicutes	Unlikely	neg
Syntrophobotulus glycolicus	Firmicutes	Unlikely	neg
Syntrophococcus sucromutans	Firmicutes	Rare	neg	neg
Syntrophomonas zehnderi	Firmicutes	Rare	vr
Tannerella forsythia	Bacteroidetes	Minor	neg	+	+		+
Tannerella serpentiformis	Bacteroidetes	Unlikely	neg
Taonella mepensis	Proteobacteria	Unlikely	neg	w
Tatumella ptyseos	Proteobacteria	Rare	neg	+						neg					d
Tepidanaerobacter acetatoxydans	Firmicutes	Rare	vr
Tepiditoga spiralis	Thermotogae	Unlikely	neg
Terrahaemophilus aromaticivorans	Proteobacteria	Rare	neg
Terribacillus aidingensis	Firmicutes	Rare	+	+	+		neg	neg	neg	neg		neg	neg	+	neg
Terribacillus halophilus	Firmicutes	Unlikely	+	neg
Terrisporobacter glycolicus	Firmicutes	Minor	+	+
Terrisporobacter mayombei	Firmicutes	Rare	+	+											+		+
Terrisporobacter othiniensis	Firmicutes	Rare	+
Terrisporobacter petrolearius	Firmicutes	Rare	+	+
Tessaracoccus massiliensis	Actinobacteria	Rare	+	+
Tetragenococcus halophilus	Firmicutes	Unlikely	+	+	+		+
Tetragenococcus koreensis	Firmicutes	Rare	+	+	+		+	w	neg	neg		neg	neg	+	+
Tetragenococcus solitarius	Firmicutes	Rare	+	+	+		+	w	neg	neg		neg	neg	+	+
Thalassobacillus devorans	Firmicutes	Non	+	+
Thauera terpenica	Proteobacteria	Rare	neg
Thermaerobacter marianensis	Firmicutes	Non	vr
Thermoanaerobacterium thermosaccharolyticum	Firmicutes	Rare	neg	+											+		neg
Thermobacillus composti	Firmicutes	Unlikely	neg	neg
Thermobispora bispora	Actinobacteria	Unlikely	+
Thermoclostridium stercorarium	Firmicutes	Unlikely	neg	+											+
Thermolithobacter ferrireducens	Firmicutes	Non	+
Thermomonas carbonis	Proteobacteria	Unlikely	neg	neg
Thermomonospora curvata	Actinobacteria	Unlikely	+
Thermophilibacter immobilis	Actinobacteria	Unlikely	+
Thermophilibacter mediterraneus	Actinobacteria	Rare	+
Thermophilibacter provencensis	Actinobacteria	Minor	+
Thermus scotoductus	Deinococcus-Thermus	Unlikely	neg
Thiomonas islandica	Proteobacteria	Unlikely	neg
Thomasclavelia saccharogumia	Firmicutes	Rare	+
Thomasclavelia spiroformis	Firmicutes	Moderate	+							neg		neg			d
Tidjanibacter inops	Bacteroidetes	Moderate
Tidjanibacter massiliensis	Bacteroidetes	Rare	neg
Timonella senegalensis	Actinobacteria	Rare	+	+	+										+
Tissierella praeacuta	Firmicutes	Rare	+	+
Trabulsiella guamensis	Proteobacteria	Rare	neg	+						neg					w
Tractidigestivibacter scatoligenes	Actinobacteria	Rare	+	+											+
Traorella massiliensis	Firmicutes	Rare	neg	neg	neg		neg	neg	+	neg		neg	neg	neg	neg
Treponema berlinense	Spirochaetes	Rare	neg
Treponema brennaborense	Spirochaetes	Unlikely	neg
Treponema denticola	Spirochaetes	Rare	neg
Treponema medium	Spirochaetes	Unlikely	neg	+											+
Treponema parvum	Spirochaetes	Unlikely	neg
Treponema pectinovorum	Spirochaetes	Rare	neg	neg											neg
Treponema pedis	Spirochaetes	Unlikely	neg
Treponema peruense	Spirochaetes	Rare	neg	+
Treponema phagedenis	Spirochaetes	Unlikely	neg
Treponema primitia	Spirochaetes	Unlikely	neg
Treponema ruminis	Spirochaetes	Unlikely	neg
Treponema socranskii	Spirochaetes	Unlikely	neg	+											neg
Treponema succinifaciens	Spirochaetes	Rare	neg	+
Treponema vincentii	Spirochaetes	Rare	neg
Tropheryma whipplei	Actinobacteria	Unlikely	neg
Trueperella bernardiae	Actinobacteria	Rare	+	+	neg			neg	+		neg	neg
Trueperella pyogenes	Actinobacteria	Rare	+	+											neg
Tsukamurella pulmonis	Actinobacteria	Unlikely	+	+
Tumebacillus avium	Firmicutes	Unlikely	+	neg					+					+
Tumebacillus permanentifrigoris	Firmicutes	Unlikely	+
Turicibacter sanguinis	Firmicutes	Moderate	+						+
Turicimonas muris	Proteobacteria	Rare	neg	neg											neg
Tyzzerella nexilis	Firmicutes	Widespread	+
Ureaplasma parvum	Tenericutes	Rare	unk	neg
Ureaplasma urealyticum	Tenericutes	Rare	unk
Ureibacillus massiliensis	Firmicutes	Rare	neg	neg
Ureibacillus suwonensis	Firmicutes	Unlikely	neg	neg
Ureibacillus thermosphaericus	Firmicutes	Non	neg	neg	neg		neg	neg	neg	neg		neg	neg		neg
Urinicoccus timonensis	Firmicutes	Rare	+	+	neg		neg	neg	+	neg		neg	neg	neg	neg
Urmitella timonensis	Firmicutes	Rare	+
Uruburuella suis	Proteobacteria	Rare	neg	+
Vaginimicrobium propionicum	Actinobacteria	Unlikely	+	+											+
Vagococcus carniphilus	Firmicutes	Rare	+	+						+
Vagococcus fluvialis	Firmicutes	Rare	+	+	+			neg	neg	d		neg	neg	+	+
Vagococcus lutrae	Firmicutes	Rare	+	+
Vagococcus penaei	Firmicutes	Rare	+	+						neg
Vagococcus teuberi	Firmicutes	Rare	+	+						+
Vampirovibrio chlorellavorus	Cyanobacteria	Unlikely	neg
Varibaculum cambriense	Actinobacteria	Rare	+	+						neg	neg				neg
Varibaculum timonense	Actinobacteria	Rare	+	neg											+
Variovorax boronicumulans	Proteobacteria	Rare	neg	neg
Variovorax ginsengisoli	Proteobacteria	Unlikely	neg	neg
Variovorax paradoxus	Proteobacteria	Unlikely	neg
Veillonella atypica	Firmicutes	Widespread	neg								neg
Veillonella denticariosi	Firmicutes	Rare	neg	neg
Veillonella dispar	Firmicutes	Moderate	neg	neg											neg
Veillonella infantium	Firmicutes	Rare	neg
Veillonella magna	Firmicutes	Rare	neg
Veillonella montpellierensis	Firmicutes	Rare	neg	neg											neg
Veillonella nakazawae	Firmicutes	Rare	neg
Veillonella parvula	Firmicutes	Widespread	neg	neg							neg				neg
Veillonella ratti	Firmicutes	Rare	neg
Veillonella rodentium	Firmicutes	Unlikely	neg
Veillonella rogosae	Firmicutes	Minor	neg
Veillonella tobetsuensis	Firmicutes	Minor	neg
Vescimonas coprocola	Firmicutes	Rare	neg
Vescimonas fastidiosa	Firmicutes	Rare	neg
Vibrio alginolyticus	Proteobacteria	Rare	neg	+						neg					neg
Vibrio cholerae	Proteobacteria	Unlikely	neg	+						neg					neg
Vibrio cincinnatiensis	Proteobacteria	Rare	neg	+	+					d					+
Vibrio fluvialis	Proteobacteria	Rare	neg	+					neg	neg					neg
Vibrio furnissii	Proteobacteria	Rare	neg	+					neg	neg					neg
Vibrio metoecus	Proteobacteria	Rare	neg	+
Vibrio metschnikovii	Proteobacteria	Rare	neg	+						neg					d(neg)
Vibrio mimicus	Proteobacteria	Rare	neg	+					neg	neg					neg
Vibrio natriegens	Proteobacteria	Rare	neg	+			+			d					+
Vibrio neptunius	Proteobacteria	Unlikely	neg	+
Vibrio parahaemolyticus	Proteobacteria	Rare	neg	+					neg	neg					neg
Vibrio proteolyticus	Proteobacteria	Rare	neg	+						neg					neg
Vibrio rumoiensis	Proteobacteria	Unlikely	neg	+
Vibrio vulnificus	Proteobacteria	Rare	neg	+						neg					d
Victivallis vadensis	Lentisphaerae	Minor	neg	+
Virgibacillus dakarensis	Firmicutes	Rare	+
Virgibacillus dokdonensis	Firmicutes	Rare	vr	+										+
Virgibacillus doumboii	Firmicutes	Rare	+	+											neg
Virgibacillus halodenitrificans	Firmicutes	Rare	vr	+										neg
Virgibacillus ihumii	Firmicutes	Rare	+	neg	neg		neg	neg	neg	neg		neg	neg	neg	neg
Virgibacillus massiliensis	Firmicutes	Rare	+
Virgibacillus ndiopensis	Firmicutes	Rare	+	neg	neg		neg	neg	+	neg		neg	neg	neg	neg
Virgibacillus pantothenticus	Firmicutes	Rare	+	+	+		d	neg				d	neg	+
Virgibacillus profundi	Firmicutes	Unlikely	vr	w										w
Virgibacillus proomii	Firmicutes	Rare	+	+	+		d(neg)	neg	neg	d		neg	neg	+	+
Virgibacillus salexigens	Firmicutes	Unlikely	+	+
Virgibacillus senegalensis	Firmicutes	Non	+	neg
Virgibacillus siamensis	Firmicutes	Unlikely	+	+											neg
Vitreoscilla massiliensis	Proteobacteria	Rare	neg
Vitreoscilla stercoraria	Proteobacteria	Rare	neg
Weeksella virosa	Firmicutes	Rare	neg	neg		neg									neg
Weissella cibaria	Firmicutes	Minor	+	+	+		neg	neg	neg	neg	vr	neg	neg	+	+
Weissella confusa	Firmicutes	Minor	+	+	neg		neg	neg	neg	neg	vr	neg	neg	+	vr
Weissella paramesenteroides	Firmicutes	Minor	+	+	neg		+	neg	neg	+		neg	neg	+	neg
Weissella viridescens	Firmicutes	Minor	+
Weizmannia coagulans	Firmicutes	Rare	+	+	d		d	neg	neg			d	d	+	d
Winkia neuii	Actinobacteria	Rare	+	+			d	neg	+	d		d		d	neg
Wolinella succinogenes	Proteobacteria	Rare	neg
Xanthomonas massiliensis	Proteobacteria	Unlikely	neg
Xylanimonas cellulosilytica	Actinobacteria	Rare	+	+	+										+
Yangia pacifica	Proteobacteria	Non	neg
Yersinia aldovae	Proteobacteria	Rare	neg	+						neg		neg	neg	+	+
Yersinia aleksiciae	Proteobacteria	Rare	neg	+					vr						neg
Yersinia alsatica	Proteobacteria	Rare	neg	+	+		+	neg	+			neg	neg	+	+
Yersinia artesiana	Proteobacteria	Rare	neg	+	+		+	+	+	neg		neg	neg	+	+
Yersinia bercovieri	Proteobacteria	Rare	neg	+					vr	neg					w
Yersinia enterocolitica subsp. enterocolitica	Proteobacteria	Unlikely	neg	+	d(+)				vr	neg		neg	neg	+	neg
Yersinia frederiksenii	Proteobacteria	Rare	neg	+	+				vr	neg		neg	neg	+	+
Yersinia intermedia	Proteobacteria	Rare	neg	+	+					+		neg	neg	+	+
Yersinia kristensenii subsp. kristensenii	Proteobacteria	Rare	neg	+	+					neg		neg	neg	+	neg
Yersinia kristensenii subsp. rochesterensis	Proteobacteria	Rare	neg	+					+						neg
Yersinia massiliensis	Proteobacteria	Rare	neg							neg					+
Yersinia mollaretii	Proteobacteria	Rare	neg	+						neg					vr
Yersinia occitanica	Proteobacteria	Rare	neg	+	d		+	d	+	neg		neg	neg	+	neg
Yersinia pestis	Proteobacteria	Non	neg	+						neg					d	neg
Yersinia proxima	Proteobacteria	Rare	neg	+	+		+	neg	+	neg		neg	neg	+	+
Yersinia pseudotuberculosis	Proteobacteria	Unlikely	neg	+	+				neg	neg	+				d
Yersinia rohdei	Proteobacteria	Rare	neg	+					neg	neg					neg
Yersinia vastinensis	Proteobacteria	Rare	neg	+	+		+	neg	+	neg		neg	neg	+	+
Yokenella regensburgei	Proteobacteria	Rare	neg	+	neg		+	neg	neg	neg					neg
Yonghaparkia alkaliphila	Actinobacteria	Non	+
Zunongwangia profunda	Bacteroidetes	Non	neg	+

Click on table headings to sort. Table abbreviations: Arbt - arbutin; EtOH - ethanol; Glct - gluconate; 2KG - 2-ketogluconate; 5KG - 5-ketogluconate; MαGl - methyl-α-glucoside; MβGl - methyl-β-glucoside; MDM - methylmannoside; MDX - methylxyloside; NAGA - N-acetylglucosamine; Sali - salicin; Muca - mucate; Pyru - pyruvate;

BACTERIA TABLES

INFORMATION